Xanthomonas sp. CPBF 426: XSP_001575
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Entry
XSP_001575 CDS
T10769
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz00020
Citrate cycle (TCA cycle)
xaz00785
Lipoic acid metabolism
xaz01100
Metabolic pathways
xaz01110
Biosynthesis of secondary metabolites
xaz01120
Microbial metabolism in diverse environments
xaz01200
Carbon metabolism
xaz01210
2-Oxocarboxylic acid metabolism
Module
xaz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xaz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XSP_001575
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XSP_001575
Enzymes [BR:
xaz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
XSP_001575
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Gene cluster
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Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
2-oxogl_dehyd_N
DUF6584
Motif
Other DBs
NCBI-ProteinID:
CAD1790299
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Position
1:complement(1828825..1831653)
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AA seq
942 aa
AA seq
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MDNLLKQFAQSSQLAGGNAAYIEDLYEQYLVAPDSVDPKWKSYFDGFKGRDAGDVPHSAA
IAHILAASKQAANAGTGAGASDERERNVGRLITAYRARGHLGAQLDPLGLTPPVNPPDLD
LPFHSLSQADMDSEFSTGGVGGQPRMKLKDLLTRLKATYASTIGAEFMHIQEFDQRQWIY
KRLEDAGGKIAGDAASRKRTLERLTAAEGLERYLHTKYVGQKRFSLEGGDALIPMMDEII
RQSGNDQVKDIVIGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHAHDDRAHTGDVKYHM
GFSADIAVGGDKQVHLALAFNPSHLEIVDPVVVGSVRSRQERFGDAERKTVLPILIHGDA
AFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTSARDDARSTLYCTDVAKMIGAP
VFHVNGDDPDAVMFVSKLAYEFRQQFKKDVVIDLVCYRRWGHNEADEPAATQPVMYQTIR
KHKTTRELYAAKLESDGVLSADEAKALVDGYRNKLDSGEYTTELATRKPDEFAIDWSKYL
VGTAADPVDTRVKREQLDRLAKLITTIPEGVELHARVAKIYEDRVKMAAGDQAGDWGFAE
NLAYATLLAEGHKLRLVGQDAGRGTFFHRHAILHDQKTDSYYLPLRQLVQNPEDATIIDS
LLSEEAVMGFEYGYSTTDPNALCIWEAQFGDFANGAQVVIDQFIAAGEAKWGRIAGLSLF
LPHGYEGQGPEHSSARLERFLQLCALENMLVCVPTTPAQCFHMIRRQMRMTTRKPLVVMT
PKSLLRHKLAVSSLEELAEGEFQHLIPDAKADAGKVKRVVLCSGKVYYDLLEDQTKRGQD
DVAILRVEQLYPFPRAQLAAELKAYANATDVVWCQEEPQNQGAWYQIRHHLNFCLASGQS
LHYAGRARSPSPAAGHMADHIVEQQKLVADALLNPFNDQVAE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
gtggataatctcctaaagcagttcgcacagtcatcgcagctcgccggcggcaacgccgcc
tatatcgaggatctgtacgagcagtacctcgtcgccccggacagtgtcgacccgaagtgg
aagagctatttcgatggcttcaagggtcgcgatgccggtgatgtgccgcactcggcggcc
attgcccacatcctcgccgcctccaaacaggccgccaacgccggaaccggcgcaggcgcc
agtgacgagcgcgagcgcaacgtcggccgcctgatcaccgcctatcgtgcgcgtggtcac
ctcggcgcgcagctcgacccgctcggcctgaccccgccggtcaacccgcccgatctggac
ctgccattccacagcctgtcgcaggcggatatggacagtgagttcagcaccggcggcgtc
ggcggccagccgcgcatgaagctgaaggatctgctgacccgcctgaaggcgacctacgcc
agcaccatcggcgcagagttcatgcacatccaggagttcgaccagcgccagtggatctac
aagcgcctggaagatgccggcggcaagatcgccggcgacgcggccagccgcaagcgcacg
ctggagcggctcaccgctgccgaaggcctggagcgctacctgcacaccaagtacgtcggc
cagaagcgcttctcgctggaaggcggcgatgcgttgatcccgatgatggacgagatcatt
cgccagtccggcaacgatcaggtcaaggacatcgtgatcggcatggcccaccgcggccgt
ctcaacgtgctggtcaatacgctgggcaagaatccgcgcaagctgttcgacgagttcgaa
ggcaagttcgagcacgcccacgacgaccgcgcgcacaccggcgacgtcaagtaccacatg
ggcttctcggccgatatcgcggtcggtggcgacaagcaggtgcatctggcactggccttc
aatccctcgcacctggaaatcgtcgacccggtcgtggtcggcagcgtgcggtcgcgccag
gaacgcttcggcgatgccgagcgcaagaccgtgctgccgatcctgatccacggcgatgcc
gcattcgccggccagggcgtggtgatggagctgttccagatgtcgcaggcgcgcggtttt
gccgtcggcggcaccgtgcacatcgtggtcaacaaccagatcggtttcaccaccagcgcc
cgcgacgacgcccgttccacgctttactgcacggacgtggccaagatgatcggcgcaccg
gtcttccacgtgaacggggacgacccggatgcggtgatgttcgtgtccaagctggcctac
gaattccgccagcagttcaagaaggacgtggtcatcgacctggtctgctaccgccgttgg
ggccataacgaggccgacgagccggcagcgacccagccggtgatgtaccagaccatccgc
aagcacaagaccacccgcgagctgtacgccgccaagctggaaagcgacggcgtgctgagc
gccgacgaggccaaggcgctggtcgacggctaccgcaacaagctcgattcgggcgaatac
accaccgaactggcgacgcgcaagccggacgaattcgccatcgactggtccaagtacctg
gtcggcaccgctgccgatccggtcgatacccgtgtcaagcgcgagcagctggatcgcctg
gccaagctgatcaccacgatcccggaaggcgtggagctgcatgcccgcgtggccaagatc
tacgaagaccgcgtcaagatggccgccggcgaccaggccggcgactggggctttgccgag
aacctggcctacgccaccttgctggccgaaggccacaagctgcgcctggtcggccaggac
gccggtcgcggcacgttcttccaccgtcacgcgatcctgcatgaccagaagaccgacagc
tactacctgccgcttcgccaactggtgcagaaccccgaggacgccaccatcatcgactcg
ctgctcagcgaagaagcggtgatgggcttcgagtacggctactccaccaccgacccgaat
gcactgtgcatctgggaagcgcagttcggcgatttcgccaacggcgcgcaggtggtgatc
gaccagttcatcgccgccggcgaagccaagtggggccgcatcgcgggcctgtcgctgttc
ctgccgcacggctacgaaggccagggcccggagcacagctccgcgcgtctggagcgcttc
ctgcagctgtgcgcgctggagaacatgctggtctgcgtgccgaccaccccggcgcagtgc
ttccacatgatccgccggcagatgcgcatgaccacccgcaagccgctggtggtgatgacg
cccaagtcgctgctgcgccacaagctggcggtgtcgagcctggaagaactggcggaaggc
gagttccagcatctgatccccgacgccaaggccgatgccggcaaggtcaagcgcgtggtg
ctgtgctcgggcaaggtctattacgacctgctcgaagaccagaccaagcgtggccaggac
gacgtcgccatcctgcgcgtggagcagctgtatccgttcccgcgtgcgcagctggccgcc
gaactcaaggcctatgccaacgccaccgacgtggtgtggtgccaggaagaaccgcagaac
cagggtgcgtggtaccagatccgccaccacctgaacttctgcctggccagcggccagagc
ctgcattacgccggccgtgcccgttcgccctcgcctgccgccggccatatggccgaccac
atcgtcgaacagcagaagctggtcgccgatgcgctactcaatccgttcaacgaccaagtc
gctgaataa
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