Xanthomonas sp. CPBF 426: XSP_002175
Help
Entry
XSP_002175 CDS
T10769
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz01501
beta-Lactam resistance
xaz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XSP_002175
01503 Cationic antimicrobial peptide (CAMP) resistance
XSP_002175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xaz02000
]
XSP_002175
01504 Antimicrobial resistance genes [BR:
xaz01504
]
XSP_002175
Transporters [BR:
xaz02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
XSP_002175
Antimicrobial resistance genes [BR:
xaz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
XSP_002175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
CAD1792096
LinkDB
All DBs
Position
1:complement(2532623..2536132)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSDHGNPHGPVHDPHASLSGGGGLVAFATRRRVTIAMITVTMLLFGLIALRSLKVNLLPD
LSYPTLTVRTEYTGAAPAEIETLVTEPVEEAVGVVKNLRKLKSISRTGQSDVVLEFAWGT
NMDQASLEVRDKMEALSLPLETKPPVLLRFNPSTEPIMRLALSPKQAPSSDSDAIRQLTG
LRRYADEDLKKKLEPVAGVAAVKVGGGLEDEIQVDIDQQKLAQLNLPIDNVITRLKEENV
NISGGRLEEGSQRYLVRTVNQFVDLDEIRNMLVTTQSSSGSAAEAAMQQMYAIAASTGSQ
AALAAAAEVQSTSSSSTSSIAGGMPVRLKDVAQVRQGYKEREAIIRLGGKEAVELAIYKE
GDANTVSTAAALRKRLEQLKATVPGDVEITTIEDQSHFIEHAISDVKKDAVIGGVLAILI
IFLFLRDGWSTFVISLSLPVSIITTFFFMGQLGLSLNVMSLGGLALATGLVVDDSIVVLE
SIAKARERGLSVLDAAIAGTREVSMAVMASTLTTIAVFLPLVFVEGIAGQLFRDQAMTVA
IAIAISLVVSMTLIPMLSSLKGAPPMAFPDEPSHPQWQPQQRWLKPVAAGRRGAGASVRY
TFFAVAWAVVRLWRGIARVVSPVMRKASDLAMAPYGRAERGYLAMLPAALRRPGLVLGLA
AAAFVGTVLLVPMLGADLIPQLAQDRFEMTVKLPSGTPLAQTDALVRELQLAHDKDPGIA
SLYGVSGSGTRLDANPTESGENIGKLTVVMAGGGSPAVEAAATTRLRNSMAGHPGAQVDF
ARPALFSFSTPLEVELRGQDLGELERAGQKLAAMLRANGHYADVKSTVEEGFPEIQIRFD
QERAGALGLTTRQIADVIVKKVRGDVATRYSFRDRKIDVLVRAQHSDRASVDAIRQLIVN
PGSSRPVRLAAVAEVVATTGPSEIHRADQTRVAIVSASLHDMDLGGAVREVESMVRNDPL
AAGVGMHIGGQGEELAQSVKSLLFAFGLAIFLVYLVMASQFESLLHPFVILFTIPLAMVG
AVLALLMTGKPVSVVVFIGLILLVGLVTKNAIILIDKVNQLREDGVPKREALIEGARSRL
RPIVMTTLCTLFGFLPLAVAMGEGAEVRAPMAITVIGGLLVSTLLTLLVIPVVYDLLDRR
ADAYYLERGRRMAGQRAQAPGNSDGLEAL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacggcaacccgcacggacccgtgcacgacccgcatgcgtccttgtccggc
ggtggcggtctggtggccttcgccacgcggcggcgggtgaccatcgcgatgatcaccgtg
accatgctgctgttcgggctgatcgccttgcgcagcctcaaggtcaatctgctgccggat
ctgagctatcccacgctgaccgtgcgcaccgaatacaccggcgcggcgccggcggaaatc
gaaacgctggtgaccgagccggtggaagaagcggtcggcgtggtcaagaacctgcgcaag
ctcaagtcgatctcgcgcaccgggcagagcgatgtggtgctggaattcgcctggggcacc
aacatggaccaggccagcctggaggtgcgcgacaagatggaagccttgtcgctgccgctg
gaaaccaagccgccggtgttgctgcgcttcaatccatcgaccgagccgatcatgcggctg
gcgttgtcgccgaagcaggcaccgtcctccgacagcgatgcgatccgccagctcaccggc
ttgcgtcggtatgccgacgaggatctaaaaaagaagctcgaaccggtggccggcgtggcc
gcagtcaaggtcggcggcgggctggaggacgagatccaggtcgatatcgatcagcagaag
ctggcccagctcaacctgccgatcgacaacgtgatcacccggctcaaggaggagaacgtc
aacatctccggcggccggctggaagaaggctcgcagcggtacctggtgcgcacggtcaac
cagttcgtggatctggacgagatccgcaacatgctggtgaccacgcagagcagcagcggc
agcgccgcggaagcggcgatgcagcagatgtatgcgatcgccgcgtccaccggctcgcag
gcggcgctggcggcggcggccgaggtgcagagcacgtcctcgtcgtcgaccagcagtatt
gccggtggcatgccggtgcgattgaaggatgtggcgcaggtgcgccagggctacaaggag
cgcgaggcgatcatccgcctgggcggcaaggaagcggtggagctggcgatctacaaggaa
ggcgacgccaacaccgtgtccaccgccgcagcgctgcgcaagcggctggagcagttgaag
gcgaccgtgcccggcgatgtcgaaatcaccaccatcgaggaccagtcgcacttcatcgag
cacgcgatcagcgacgtcaagaaggatgcggtgatcggcggcgtgctggcgatcctgatc
atcttcctgttcctgcgcgatggctggagcaccttcgtgatcagcctgtcgctgccggtg
tcgatcatcaccacgttcttcttcatgggccagctgggcctgagcctcaacgtgatgtcg
ctgggcggtctggcgctggccaccggcctggtggtggacgattcgatcgtggtgctggaa
agcatcgccaaggcgcgcgagcgcggcctgagcgtgctggatgccgcaatcgccggcacc
cgtgaagtgagcatggcagtgatggcgtccacgctgaccacgatcgcggtgttcctgccg
ttggtgttcgtcgaaggcatcgccgggcagctgttccgcgaccaggcgatgaccgtggcg
atcgcgatcgcgatctcgctggtggtgtcgatgacgctgatcccgatgctgagttcgctc
aagggcgcgccaccgatggcgttcccggacgagccgagccacccgcagtggcagccgcag
cagcgctggctcaagccggtggccgccggccggcgcggagccggggcgagcgtgcgctac
acgttcttcgctgtggcgtgggcggtggtccggctgtggcgcggcatcgcgcgggtggtg
tcgccggtgatgcgcaaggccagcgatctggcgatggcgccgtatggccgcgccgagcgt
ggctatctggcgatgctgccggcggcgttacggcggcccgggttggtgctgggactggcg
gctgccgcgtttgtcggcaccgtgttgctggtgccgatgctgggggcggacctgattccg
cagctggcgcaggaccgcttcgaaatgaccgtgaagctgccttccggtacgccgttggcg
cagaccgacgcgctggtgcgcgagttgcagctggcgcacgacaaggacccgggcatcgcc
tcgttgtatggcgtcagcggcagcggcacgcggctggacgccaatcccaccgaaagcggc
gagaacatcggcaagctcaccgtggtgatggccggtggcggcagcccggcagtggaagcg
gcggccaccacgcggctgcgcaacagcatggccgggcacccgggggcgcaggtggatttt
gcacggccggcgttgttcagtttttccacgccgctggaagtggagctgcgtgggcaggac
ctgggcgagctggaacgtgccgggcagaagctggcggcgatgctgcgggccaatggccac
tacgccgacgtcaagtcgacggtggaggagggcttcccggaaatccagatccgtttcgac
caggagcgcgccggtgcgctgggcttgaccacgcgccagatcgccgatgtcatcgtcaag
aaggtgcgcggggacgtggccacgcgttacagctttcgcgatcgcaagatcgacgtgctg
gtgcgcgcgcagcacagcgaccgcgccagcgtggacgcgatccggcagctgatcgtcaac
cccggcagtagccggccggtgcgtctggcggcggtggccgaggtggtggcgacgaccggg
ccgagcgagatccatcgcgccgaccagacccgcgtggcgatcgtctcggccagcctgcat
gacatggatctgggcggtgcggtgcgtgaggtcgagtcgatggtgcgcaacgatccgctg
gccgctggcgtgggcatgcatatcggcgggcagggcgaggagctggcgcaatcggtgaag
tcgctgctgttcgcgttcggcctggcgatcttcctggtctacctggtgatggcctcgcag
ttcgaatcgctgctgcatccgttcgtcatcctgttcaccatcccgctggcgatggtcggc
gcggtgctggccttgctgatgaccggcaagccggtgtcggtggtggtgttcatcggcttg
atcctgctggtggggctggtgaccaagaacgcgatcatcctgatcgacaaggtcaaccag
ttgcgcgaggacggcgtgcccaagcgcgaggccttgatcgaaggtgcgcgttcgcgcttg
cggccgatcgtgatgaccacgctgtgcaccttgttcggtttcctgccgctggcggtggcg
atgggtgagggtgccgaggtgcgcgcgccgatggcgatcaccgtgatcggcgggttgctg
gtgtccacgctgctgaccctgctggtgatcccggtggtttacgacctgctggatcgacgc
gccgatgcgtactacctggagcgtggccgacgcatggccgggcagcgtgcgcaggcaccc
gggaactccgacgggctggaggcgctatga
DBGET
integrated database retrieval system
