Xanthomonas sp. CPBF 426: XSP_002393
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Entry
XSP_002393 CDS
T10769
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz01501
beta-Lactam resistance
xaz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XSP_002393
01503 Cationic antimicrobial peptide (CAMP) resistance
XSP_002393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xaz03036
]
XSP_002393
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xaz02000
]
XSP_002393
01504 Antimicrobial resistance genes [BR:
xaz01504
]
XSP_002393
Chromosome and associated proteins [BR:
xaz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
XSP_002393
Transporters [BR:
xaz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
XSP_002393
Antimicrobial resistance genes [BR:
xaz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
XSP_002393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
Biotin_lipoyl
BSH_YknX
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
CAD1792723
LinkDB
All DBs
Position
1:2776862..2778166
Genome browser
AA seq
434 aa
AA seq
DB search
MIAPLRTFGLACAITLALAACSKPEQQQAPPPPEVSVLEMKPQTLPLERDLVGRLSAFRS
ADVRARVDGVVLKRLYTEGTDVKEGQPLFEIDPAPLKATLLQAQGQLAAAEATYANAQVA
AKRARSLAPQQYVSRADIDNAEATERSSRANVQQARGQVESARIQLGFASVTSPITGRAG
IQRVTEGALVGSGEATLLTTVDQIDPLYVNFAMSSEELAALRQAQSSGNVQLSGDGKSTI
NVELGNGTQYPHPGTLDVSAVTVDPSTGAVSLRATLPNPEQALLPGAFVTFKASLGQRNN
AYLMPQQAVQRDATGAYALVLGKDGKVVRKNLTVDGQQKGQWIVTGGVTPGDQVIVDGVQ
KAKEGQPAKGVPWDPNKPAQGGQPGAPGAAPAAQGGNAQAAPAADKADAAAPAAQEQSKP
DAAAQPAESQSKQQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccccgctccgcacattcggcctggcctgtgccatcaccctggcgctggctgcc
tgcagcaagcccgaacaacagcaggcgccgccgccgccggaagtgtcggtgctggaaatg
aagccgcagacgctgccgctggaacgcgacctggtcggccgcctgtcggcattccgctcg
gccgacgtgcgcgcacgcgtggacggcgtggtgctcaagcgcctgtacaccgagggcacc
gacgtcaaggaaggccagccgctgttcgagatcgacccggcaccgctgaaggccacgctg
ctgcaggcgcagggccagctggccgccgccgaggcgacctacgccaatgcccaggtcgcc
gccaagcgcgcgcgcagcctggccccgcagcagtacgtgtcgcgggccgacatcgacaac
gccgaagccaccgagcgctcctcccgcgccaacgtgcagcaggcacgcggccaggtcgag
tccgcccgcatccagctcggctttgccagcgtcacctcgccgatcaccggccgcgccggc
atccagcgcgtgaccgaaggtgcgctggtcggctcgggtgaggccaccctgctgaccacg
gtcgaccagatcgacccgctgtatgtgaactttgcgatgagcagcgaagagctcgccgcc
ctgcgccaggcccagagcagcggcaacgtgcagctcagcggcgatggcaagtccaccatc
aacgtggaactgggcaacggcacgcagtacccgcacccgggtacgctggacgtgtcggcg
gtgacggtggacccgagcaccggtgcggtgtcgctgcgcgcgaccctgcccaacccggaa
caggcactgctgccgggcgcgttcgtgaccttcaaggccagcctgggccagcgcaacaac
gcctacctgatgccgcagcaggccgtgcagcgcgatgccaccggcgcctacgcgctggtg
ctgggcaaggacggcaaggtggtgcgcaagaatctcaccgtcgacggccagcagaaaggt
cagtggatcgtcaccggtggcgtgaccccgggcgatcaggtgatcgtcgatggcgtgcag
aaggccaaggaaggccagccggccaagggcgtgccgtgggatccgaacaagccggcgcag
ggcggccagccgggtgcaccgggcgcggctcccgccgcccagggtggcaacgcacaggcc
gcaccggcagccgacaaggccgacgcggcggcaccggccgcgcaggaacagtccaagcca
gacgctgcggcgcagccggccgaatcccagtccaagcagcagtaa
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