Xenorhabdus bovienii SS-2004: XBJ1_0787
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Entry
XBJ1_0787 CDS
T01186
Symbol
ycbY
Name
(GenBank) putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xbo03009
]
XBJ1_0787 (ycbY)
Enzymes [BR:
xbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
XBJ1_0787 (ycbY)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
XBJ1_0787 (ycbY)
Ribosome biogenesis [BR:
xbo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XBJ1_0787 (ycbY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
RlmL_1st
THUMP
Cons_hypoth95
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_11
Methyltransf_15
Methyltransf_3
N6_Mtase
Motif
Other DBs
NCBI-ProteinID:
CBJ79928
UniProt:
D3UWU3
LinkDB
All DBs
Position
complement(798088..800205)
Genome browser
AA seq
705 aa
AA seq
DB search
MNSLFASTARGLEELLKNELEMLGAQSCKIAQGGVHFQGDDRVMYKSLLWSRLASRILMP
LNEFNVYSDLDLYLGVQSVDWSEIFSVDSTFSVHFSGTNEEIRNTQYGALRVKDAIVDSF
VRKIKQRPDVAKQQPDIRIDVFLNKEKATLSLDLSGEGLHIRGYRDLAGQAPLKETLAAA
VVLRSGWKAETPLIDPMCGSGTLLIEAAMMAADGAPGLHRQHWGFTSWLKFDQEIWREMM
AEAQVRFRKGLQETTSRFFGSDIDRRVMDMARSNARRAGVAQLIQFQQGDASKLENPLTE
GVVGTILSNPPYGERLESEPALVALYSIFGRIMKSRFPGWRLSLFSASPELLSCLQLRAE
REFKAKNGPLDCVQKNYQLSDKPQSLDAGIADDYANRLRKNEKKLSKWAKQQGIDCYRLY
DADLPEYNVAVDRYADKVVVQEYSPPKTVDANKARQRLFDVISATMNVLELSSNQLILKT
RQRQTGKNQYEKMAEKKEFFLVNEYGAKFWVNLTDYLDTGLFLDHRIARRKLGEMSQGKD
FLNLFAYTGSATVHAGLGGARSTTTVDMSRTYLEWAEKNLQANGLSGRQHRLIQADCLGW
LAQSREQFDLIFIDPPTFSNSKRMEDSFDVQRDHITLMKQLKCLLRRGGTLMFSNNKRGF
KMDFAELDKLGLVAEEITEKTVSQDFARNRQIHNCWLLRHAGEEK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaactctctctttgccagcacggcacgtgggctggaagaattattaaaaaatgaattg
gaaatgctgggagcacaatcctgcaagattgcccaaggtggagttcattttcaaggtgat
gatcgggtgatgtataaaagcttgctctggagcaggctggcatcacgtatcctgatgccg
cttaacgaattcaatgtttatagcgatttggatctctatcttggggttcaatctgttgac
tggagcgaaattttttcagtcgatagcacattttccgtgcatttcagtggcacgaatgag
gaaatcagaaacacacaatatggcgccctgagagtgaaagacgccattgttgatagcttt
gtacgtaaaataaagcaacgtcctgatgttgccaaacaacagccggatattcgcattgat
gtttttttgaataaggaaaaagcaaccctgtcgcttgatctgagtggagaagggttgcat
atccgtggctaccgtgatttggctggccaagctccgctgaaagaaacacttgcagcggcg
gttgttttgcgctctggctggaaagcggaaacgccgctgattgatccgatgtgtggttca
ggaacattgttgatagaagcggcaatgatggctgccgatggcgctccgggtttgcaccgt
cagcattgggggtttacatcatggctgaaatttgaccaagaaatctggcgtgaaatgatg
gctgaagcgcaggtacgtttccgtaaagggctacaggaaacgacttctcgcttttttggt
tcggatattgatcgtcgggtcatggatatggctcgctcaaatgcccgcagagcaggcgtt
gcccaattaatccagtttcaacaaggggatgcgagtaagctggaaaacccattgacggag
ggcgttgtgggaacaatactgagcaacccgccttatggtgaacgtcttgaaagtgagccg
gcactggttgccttgtacagcatatttggacgaataatgaaaagccgcttcccaggctgg
cgtctctcattattcagtgcttcgccagagttgttgagttgcttgcaattacgcgctgaa
cgagagtttaaggctaaaaatggcccgctggattgtgtccagaagaattatcaactttcg
gacaaaccgcaatcactggatgccggtattgcagatgattatgctaaccgtttgcgcaaa
aatgagaagaaactcagtaagtgggcgaagcagcagggtattgactgttatcgtttatat
gatgcggatttacccgaatacaacgttgcggttgatcgttatgcggacaaagtcgtcgtt
caggaatattcgccacctaaaaccgtagatgccaacaaagcccgtcaacgcttgttcgat
gtaataagtgcaaccatgaatgtgctggaattgtcatctaaccaactgatcctgaaaacg
cgtcagcgtcagacaggcaaaaatcaatatgaaaaaatggccgaaaagaaagaattcttt
ttggtgaacgagtatggcgcgaaattctgggtcaacttgacggattatctggataccggt
ctgtttcttgatcatcgtattgcccgcagaaaattgggtgaaatgagccaagggaaagat
ttccttaacctgtttgcctataccggttcagcgacagtgcatgctggattaggcggtgcg
aggtctacgaccacggtggatatgtcccgcacttatcttgaatgggcagagaagaaccta
caggctaatggcttgtccggacgccagcatcgtttgattcaggctgattgtttgggatgg
ctggcgcaaagtcgcgagcaattcgatttgatctttatcgatcctccgacattttctaac
tctaagcgaatggaagactcattcgatgttcagcgtgatcacattactctgatgaaacag
cttaagtgtctgcttcgtcgtggcggaaccctgatgttctccaacaataagcgaggtttc
aaaatggattttgctgaacttgataaattaggactggttgcagaagaaatcacagagaaa
acggtatctcaggattttgcccgtaaccgccagattcataactgctggttactgcgtcac
gccggcgaggaaaaataa
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