Xenorhabdus bovienii SS-2004: XBJ1_1057
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Entry
XBJ1_1057 CDS
T01186
Symbol
sucA
Name
(GenBank) 2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00020
Citrate cycle (TCA cycle)
xbo00785
Lipoic acid metabolism
xbo01100
Metabolic pathways
xbo01110
Biosynthesis of secondary metabolites
xbo01120
Microbial metabolism in diverse environments
xbo01200
Carbon metabolism
xbo01210
2-Oxocarboxylic acid metabolism
Module
xbo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xbo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XBJ1_1057 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XBJ1_1057 (sucA)
Enzymes [BR:
xbo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
XBJ1_1057 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
CBJ80198
UniProt:
D3UX86
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All DBs
Position
complement(1048783..1051590)
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AA seq
935 aa
AA seq
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MQNGAMKDWLDSSFLAGANQSYIEQIYEDYITDPNSVDASWREIFQQLPDIGLSGEQLHS
QTRDYFRRLAKDATRYHTSVSDPAMDAKQVKVLQLINAFRFRGHQSANLDPLGLWKQEPV
PDLDPAFHNLTKADFEETFNVGSFAIGKETLKLADLYDALKRIYCGSIGAEYMHITNTEE
KRWIQQRLESIAVGSQFSADEKHRFLAELTAAEGLERYLGAKFPGAKRFSLEGGDALIPM
LKELIRHAGKQGTREVVLGMAHRGRLNVLVNLFGKKPADLFDEFAGKHKEHLGTGDVKYH
QGFSSDFETEGGLVHLALAFNPSHLEIVSPVVIGSVRARRDRLDEGRSNMVLPVTIHGDA
AVIGQGIVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPKDARSTQYCTDIVKMVQAP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPLMYQKIK
KQPTPRKIYADKLIAEGLLAANDVTEMANLYRDALDHGECVVNEWRPMGLHSFTWEPYLN
HEWDEDYPHKVDMKRLQDLGKRISTIPAEVEMHSRVAKIYGDREEMANGNKLFDWGGAET
LAYATLVDEGIPVRLSGEDAGRGTFFHRHAVIHNQPNAAVYVPLENVHSSQGVFNVWDSV
LSEEAVLAFEYGYATTEPRALTIWEAQFGDFANVAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLIVMTP
KSLLRHPLAVSSLDELANGKFEPVIGEIDALDPKGVKRVVLCSGKVYYDLLDQRRKNEQA
DVAIVRVEQLYPFPRQNLQSLLEQYAHVHDFVWCQEEPLNQGAWYCSQHNFREVIPFGAS
LRYAGRPASASPAVGYTSVHQQQQQALVNDALNVE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaggactggctggactcgagctttctggctggtgcaaaccag
tcttacatagagcaaatctatgaagactatataaccgatcctaactccgttgatgcaagt
tggagagaaatattccaacaattaccggatatagggcttagcggggaacaacttcactca
cagacgcgcgattacttccgtcgtctggcaaaagatgccacgcgttatcacacttcagtc
agcgatccagcaatggatgcaaaacaagttaaagttttgcagctcattaacgcattccgc
ttccgcggccatcaaagtgcgaatcttgacccattgggattatggaaacaggaacctgta
cccgatctcgatcctgctttccataatttaacaaaagcggattttgaagaaacgttcaat
gttggctcgtttgccattggcaaagaaacactgaaactggctgatctatatgacgccctg
aaacgcatttactgtggttcaattggtgcggaatatatgcatatcaccaatacggaagaa
aaacgctggattcagcagcgtctggaatccattgcggtaggttcacagttcagtgcggat
gaaaaacatcgtttcttggcggaactgacagcagcggaagggttagaacgctatttgggg
gctaagttcccgggggcgaaacgtttttcccttgaaggtggtgatgcgcttatcccaatg
ctgaaagaactgatccgccatgcgggaaaacagggtacccgtgaagttgtgctgggaatg
gctcatcgtggccgcctcaacgttctggtcaatctctttggtaaaaaaccagctgatttg
tttgacgaatttgcgggtaaacataaagagcatctcggtacaggtgacgtaaaataccat
cagggcttttcctctgatttcgaaactgaagggggattggtacatttggcgttagctttc
aacccatctcaccttgaaattgtcagccctgtcgttattggttcagtgcgtgctcgccgt
gaccgtcttgatgaaggccgaagcaacatggttctgccagtaaccattcatggtgacgct
gctgtaatagggcaggggattgttcaggaaaccctgaatatgtctcaggctcgaggctat
gaagttggcggtactgttcgcatcgtgattaacaaccagattggtttcactacctctaat
ccgaaagatgcccgttcaacgcaatattgtactgatattgtgaaaatggtgcaggcaccg
attttccacgttaacgcggatgatccggaagccgttgcctttgttactcgtctggcgctt
gatttccgtaataccttcaaacgtgatgtgatgattgatctggtttgctaccgtcgccac
ggtcataacgaagctgatgagccaagtgcaactcagccactgatgtaccagaaaatcaaa
aaacagccgacaccacgtaaaatctatgcagataaactcatagcagaaggcctgctggca
gctaacgatgttactgaaatggccaatctgtatcgtgatgcgctggatcatggtgagtgc
gttgtgaatgaatggcgtcctatggggttgcactcatttacgtgggagccttacctgaat
cacgaatgggatgaggactacccacataaagtggatatgaaacgcctgcaagatctcggc
aaacgtatcagcaccattcctgctgaagttgaaatgcattcacgggttgcgaaaatttac
ggcgaccgtgaagaaatggctaacggcaataagctgtttgactggggtggtgcggaaaca
ttggcttacgctactctggttgatgaaggcatccctgtgcgcctatcgggtgaagatgcg
ggtcgtggtacatttttccaccgtcatgccgttatccataatcagccgaatgctgctgtt
tatgtccctctggaaaatgttcacagtagtcagggtgtattcaacgtatgggattctgta
ctgtcagaagaagcagtactggcgtttgaatacggttatgcaacgacagaacctcgcgct
ttgacgatttgggaagcccagttcggtgatttcgctaacgttgcgcaggttgtgattgac
cagtttatcagctccggtgaacagaaatggggccgtatgtgtggtctggtcatgctgttg
ccgcacggttatgaaggtcaaggtccagaacactcatcagcacgtttggagcgctatctg
caattgtgtgcagaacagaatatgcaggtttgtgtaccatcaactccggctcaggtttat
cacatgctgcgccgtcaggctctgcgtggtatgcgtcgtccgctgattgtcatgacacct
aaatcactgttgcgtcatccattggcggtctccagtctggatgaactggctaacggtaaa
ttcgagcctgtgattggtgaaattgacgccttggatccaaaaggtgttaaacgtgttgtg
ctttgttccggtaaagtttattacgatctgttggatcagcgtcgtaagaacgagcaggct
gatgttgccattgtgcgtgttgaacagctatatccattcccgcgtcagaacttgcagtct
ctgcttgagcagtatgctcatgttcatgacttcgtctggtgtcaggaagaacctctgaac
caaggtgcttggtattgcagtcaacataatttccgtgaagtgatcccatttggggcttct
ttacgttatgcaggtcgtccagcatctgcttccccggcagtgggttatacgtctgttcac
cagcagcagcagcaagcgctggttaatgatgccctgaacgttgaataa
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