KEGG   Xenorhabdus bovienii SS-2004: XBJ1_1998
Entry
XBJ1_1998         CDS       T01186                                 
Symbol
putA
Name
(GenBank) multifunctional: transcriptional repressor of proline utilization; proline dehydrogenase; pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
xbo  Xenorhabdus bovienii SS-2004
Pathway
xbo00250  Alanine, aspartate and glutamate metabolism
xbo00330  Arginine and proline metabolism
xbo01100  Metabolic pathways
xbo01110  Biosynthesis of secondary metabolites
Module
xbo_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    XBJ1_1998 (putA)
   00330 Arginine and proline metabolism
    XBJ1_1998 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xbo03000]
    XBJ1_1998 (putA)
Enzymes [BR:xbo01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     XBJ1_1998 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     XBJ1_1998 (putA)
Transcription factors [BR:xbo03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    XBJ1_1998 (putA)
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: CBJ81124
UniProt: D3V309
LinkDB
Position
complement(1985206..1989186)
AA seq 1326 aa
MGSTTMGVKLDEATRNRIKSAAQRIERTPHWLIKQAIFNYLERLENEEKIPEISVFQDNK
EEKISEEESQIEATSQPFLDFAEHILPQSVKRSAITSAYRLPETQAVPMLLQRAQLSGEQ
AKATHKLAYSIAEKLRQQKHGTGRAGLVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT
RDALIRDKISNGNWHSHLGQSPSMFVNAATWGLLFTGKLVSTHNEAKLSKSLNRIISKSG
EPLVRKGVDMAMRLMGEQFVTGETIAQALANARKLEEKGFRYSYDMLGEAALTEEDAQAY
MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYERVIDELYPRLLSLTLQA
CQYDIGINIDAEEADRLEISLDLLEKLCFEPKLEGWNGIGFVIQAYQKRCPFVIDSIIDL
AQRSRHRLMIRLVKGAYWDSEIKRAQIDGLEGYPVYTRKVYTDVSYIACARKLLSVPNLI
YPQFATHNAHTLSAVYHLAGQNYYPGQYEFQCLHGMGEPLYEQVVGKIADGRLNRPCRIY
APVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVKVVQELAQSEGQIGL
PHPKIPLPHDLYGKNRVNSSGLDLSNEHRLASLSSALLSSSMETWNSEPLLGGDYAHTGE
LPTAKSVNNPARPSDIVGYVREATEQEVSHALDVAIDAGTIWFATPPSERAAILVRAAEL
MENNLQSLLGILVRESGKTFNNAIAEVREAVDFLYYYANQVRQDFANDTHRPLGPVVCIS
PWNFPMAIFTGQIAAALAAGNSVLAKPAEQTPLIAAVAVKMLHQAGIPRDVLQLLPGQGE
TVGALLVGDERVRGVMFTGSTEVASLLQRNIAGRLDAQGRPTPLIAETGGLNAMIVDSSA
LTEQVVTDVVASAFDSAGQRCSALRILCVQDDVAERTLTMLKGAMAECRIANPEHLSTDI
GPVIDAEAKAGIERHIQTMRTKGRPVYQAVHKNEADSQESSQGTFVKPTLIELENFDELK
KEVFGPVLHVVRFNRNELDKLLEQINASGYGLTLGVHTRIDETIAQVTANAKVGNLYVNR
NMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLSQRPVNAASQTLERQDEEYQLDARAR
VALRSPFNKLAEWVTAQHNDALSKLIQKYSLLAQGGTIRLLPGPTGERNTYTLLPRGEVL
CLADNEQDTLVQLSAVLSVGCQAIWEKDDLHQQLLRQLPDEVRHSIRLINDWQNEETEME
AVIYHGDCDQLRHVCGIIAQRKGPIVSVQGFARGETNLLLERLLHERSLSINTAAAGGNA
SLMTIG
NT seq 3981 nt   +upstreamnt  +downstreamnt
atgggtagtaccactatgggcgtgaagctcgatgaagcaacgcgtaatcgtataaaatct
gctgcacaacgaattgaacgcacaccacactggctgattaagcaagccatttttaattat
cttgaacgcctggaaaatgaggaaaagatcccagaaatatcagtgtttcaggataacaaa
gaagaaaagatttccgaagaagaatcacagattgaggcgacttctcaaccatttttggat
tttgccgagcatattttgccccaatcggtgaaacgttctgcaattacttcagcgtatcgt
ctgcccgaaacgcaggcagttcccatgttgctgcaacgtgctcaattatcaggagaacaa
gccaaagcgacccacaaactcgcttactccatcgctgaaaaactacgccagcaaaaacat
ggcactggccgcgccggtttagttcaagggttactgcaagagttctccctttcttcacag
gaaggcgttgcgctgatgtgtcttgccgaagccctgctgcgtattcccgacaaagcgacc
cgtgatgcgctgatccgtgacaaaatcagcaacggtaattggcattctcatcttggccaa
agcccatctatgttcgtcaatgccgcaacttggggtctgttgttcacgggcaagctggta
tctacccataatgaagccaaattatccaagtccttgaaccgcattatcagcaagagcggt
gaaccattggtgcgcaaaggtgttgatatggcgatgcgcctgatgggagaacaatttgtc
acaggtgaaaccatcgcccaagccctcgccaacgctcgcaagctggaagaaaaaggcttc
cgctattcatatgacatgctgggtgaagctgcgctgacagaagaagatgcacaggcatac
atggtttcttatcaacaggcaatccacgccattggtaaggcatcgaacggccgcggcatt
tatgaaggaccgggcatctccattaagctgtcagccctgcatccacgttatagccgtgct
caatatgaacgcgtcatagatgagctttatccacgcctgctttctctgactttacaggct
tgtcaatatgacatcggtatcaatatcgatgcagaagaagcagatcgtctggaaatctct
ctcgatttgctggaaaaattgtgttttgaaccaaaactggaaggctggaacggtatcggt
tttgttattcaggcttaccaaaagcgctgtccttttgtgattgacagcattatcgacctg
gcgcaacgcagccgccatcgcttgatgatccgtctggtgaaaggagcttattgggatagt
gaaatcaaacgtgcccaaattgatggtctggaaggctacccggtgtatacccgcaaagtg
tataccgacgtttcttacatcgcctgcgcccgtaaactgctttccgtccccaatctgatc
tatccacagtttgcgacccacaacgcgcatactctatctgcggtttaccatctggctgga
cagaattattatccgggacaatatgagttccagtgtctgcacggcatgggtgaaccgctg
tatgagcaggttgtcggcaagattgccgatggcaggctcaaccgcccatgtcgcatttat
gcgcctgtcgggacacatgaaacactattggcttatctggttcgccgcctgttggaaaat
ggcgccaatacttcgttcgttaatcgcattgcagatacctccctgccccttgatgaactt
gttgctgatccggtgaaagtagttcaggaactcgcacaatctgaaggacaaattggtctg
ccacatccgaaaattccactaccacatgatttatacggcaagaaccgcgtcaattcctcg
gggctggatctgtcgaatgagcaccgtttggcttcactctccagcgcattactgagctct
tcgatggaaacatggaacagcgagccgctgctgggtggtgattatgcacataccggcgaa
ttgccgacagctaaatccgtcaataatcctgcgcggccttccgatatcgtgggctatgtc
cgtgaagcgactgagcaagaagtcagccacgctctggacgttgccatcgatgcaggtact
atttggtttgcaactcccccctcagaacgcgccgcgattttggtgcgtgcagcggaattg
atggaaaataacctgcaatccctgctcggcattttggttcgtgaatccggtaaaaccttc
aacaatgccatcgctgaagtgcgtgaagccgttgactttctctattattacgcaaatcaa
gttcggcaggatttcgccaatgacacccatcgcccactagggccagtagtttgtatcagt
ccgtggaacttcccgatggcgattttcactggccaaatcgccgcagcattggcggcaggt
aatagtgtcttggcaaaaccagcggaacagacgccattaattgccgctgttgcagtcaaa
atgctgcatcaggcaggtatcccgcgtgatgtgctgcaattgctgcctggtcaaggggaa
actgtcggggctttgctggttggtgatgagcgtgtgcggggcgtgatgtttacaggctcc
accgaagttgccagcctgttgcagcgcaatattgccggccgtcttgatgcacaggggcgc
ccaacgccattgatcgccgagacgggcggactgaatgccatgattgtcgattcctcagca
ctgacggaacaagttgtcaccgatgtggtcgcgtcggcctttgacagtgcgggtcagcgt
tgttccgctctgcgtattctgtgcgtacaagacgatgtggcagaaagaacccttactatg
ctgaaaggagccatggctgagtgtcggatagcaaatcctgaacacttatcaacggatatc
ggcccggtgattgatgccgaagcgaaggctggcattgagcgccatatccagaccatgcgc
accaaaggcaggccggtttatcaagcagtacataaaaatgaagccgatagtcaggaatct
tcacaaggcacgtttgtcaaacccacgctgattgagctggaaaattttgatgaattaaag
aaagaagttttcggccccgtactgcatgtagtgcgttttaaccgtaatgagctggataaa
ctgctggaacaaatcaacgcttctggttacggattaacgctaggtgttcatacgcgcatt
gatgaaaccatcgcacaagtcacggccaacgctaaagtcggtaacttgtatgtcaaccgc
aatatggtcggggctgtcgtcggtgtacagccatttggtggcgaaggtctgtcaggcacc
gggccaaaagcgggtgggccgctttatctgtatcgtctgttatcacagcgtcccgtcaat
gctgccagccagacactggaacgtcaggatgaggaatatcagcttgatgccagagcgcgt
gtcgccctgcgctcccctttcaacaaattggctgaatgggtaacagcacaacataacgat
gctttgagcaaattaattcagaaatacagcctgttagctcagggcggaaccattcgatta
ctaccgggacctacaggggaacgcaatacttatacgctcttgccacgcggtgaagttttg
tgtctggccgataatgagcaagatacgttggtacaattgtctgccgtgttgtctgtcggc
tgtcaggccatctgggagaaagacgatttgcatcagcaattactgcgtcaattgccggat
gaggttcgccactcaattcgtctgatcaacgattggcaaaatgaagagacggaaatggaa
gccgttatttatcacggtgattgcgaccagctacgtcatgtctgcggtatcatcgctcaa
cgcaaagggccgattgtttcagtacagggttttgcccgtggtgaaacaaacctgctactg
gaacgtctattacatgaacgctcattaagtattaatactgccgccgcagggggtaatgcc
agtctaatgacaattgggtaa

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