Xenorhabdus budapestensis: HGO23_00980 Help Entry HGO23_00980       CDS       T07176                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism xbu  Xenorhabdus budapestensis Pathway xbu03030   DNA replication xbu03410   Base excision repair xbu03420   Nucleotide excision repair xbu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:xbu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     HGO23_00980 (ligB)    03410 Base excision repair     HGO23_00980 (ligB)    03420 Nucleotide excision repair     HGO23_00980 (ligB)    03430 Mismatch repair     HGO23_00980 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:xbu03032]     HGO23_00980 (ligB)    03400 DNA repair and recombination proteins [BR:xbu03400]     HGO23_00980 (ligB) Enzymes [BR:xbu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      HGO23_00980 (ligB) DNA replication proteins [BR:xbu03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      HGO23_00980 (ligB) DNA repair and recombination proteins [BR:xbu03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      HGO23_00980 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      HGO23_00980 (ligB)    MMR (mismatch excision repair)     DNA ligase      HGO23_00980 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       HGO23_00980 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_OB DNA_ligase_aden RNA_ligase HHH_5 Motif Other DBs NCBI-ProteinID:  QTL40044 LinkDB All DBs Position complement(239649..241469) Genome browser AA seq 606 aa AA seqDB search MLNFLIIILVLLFGMPMVLANCPAWSKEKLQLEIERLTPQIAKWDHLYRQQGISEIDDEI YDQLLETLTLWQDCLKQKQDNTPAVSALSNKTVSDKAFVIDKSFSAVVLHKVGLASGKQF HPVQHTGLHKLKRIEEIRRWLQGRSAVWVQPKIDGVAVTLVYQNGLLVGLISRGNGAEGT DWLDKSEFISSIPKQIENAPDHMILQGELFWQQNNHRQSIAGSQNARSKVAGLMMRKTPS PELSQIGIFVWSWPDGPNEMAVKLEKLTSMGFPITQQYSHQIFNAEDAEEKWKMYFTHPL PFATDGVVLRQETEPAGMQWRSGSNSWSIAWKYPLQQQVTTVKDVQFKIGRTGKISVLLE LEKVQLDDRKINRVHIGSIKRWQQWDVYPGDKVTVTLAGHGIPKLDKVVWRIAERQNIQP PNTQQFHSLSCFVLNNQDCQQQFIARLTWMGKKLKMKGVGQGIWAALVRDGRVTHLADWL ALNTKQLAEIPNIGAKRAELIFTQFQQAQRQPVSLWREAIGMPYANRFMEEVNQYRDVQL SETGTDSTLTAKQRTKIEEFLQYPEVKELVETLILQGININVHGIAFHIPYEFQDAASLQ EAISLQ NT seq 1821 nt NT seq  +upstreamnt  +downstreamnt atgcttaattttctgattataattttggtgttgttgtttggaatgccgatggtattagca aactgcccggcttggtcaaaggaaaaactccagcttgaaatagaacgcctgacaccacag atagcaaaatgggatcacctttatcgtcagcagggaatcagtgaaatagatgatgagatt tatgatcaactattggaaaccctgacgctctggcaggattgtttaaaacaaaaacaagac aatacccctgctgtatctgctttatcaaataagacagtatcagacaaagcttttgtgata gacaaatcattctcggcggtggtgctacataaggtgggtctagctagcggaaaacagttt caccctgttcagcatacaggcctgcataaactaaaaagaatagaggaaattcgccgatgg ttacaaggacgttcggccgtttgggtacagcctaaaattgatggagttgcagttacgttg gtttatcaaaacggtctcttagtcggattaatcagcagagggaatggtgcagaagggacg gattggctggataaaagtgaatttatttccagtattcctaaacagatagaaaatgcaccg gaccatatgattttacaaggagaactcttttggcaacagaataaccatcgtcaatctatt gcaggtagtcagaatgcgcgcagcaaagtagctgggttgatgatgcgtaaaactccttca ccggaactcagccaaatagggatatttgtatggagctggccggatgggccaaatgagatg gcagttaaactggagaaactgacatcaatgggatttcccattacacagcaatatagccat caaattttcaatgcagaagatgcggaggaaaagtggaaaatgtattttacccatcctctc ccttttgccacagacggtgttgttttaagacaggaaactgagcctgctggcatgcaatgg cgttctggttcaaacagttggtcgattgcgtggaagtatcctttgcaacagcaagttaca acagtaaaagatgttcagttcaagataggtcggacaggaaaaatatctgttttactggag ctggaaaaagtgcaattagacgatagaaaaatcaatcgggttcatattggttcaataaaa cgttggcagcagtgggatgtttatccgggggataaagtaaccgtgacactggcggggcat ggcataccaaaactcgataaagtggtatggcgcattgcggaacgtcaaaatattcaacct cctaatacgcagcagtttcattcgctcagttgttttgtactgaataaccaagattgccaa cagcagtttattgctcgtctgacatggatggggaaaaaattgaaaatgaagggtgttgga caaggtatatgggctgctttagtaagagatggacgggtaacacatttggcagactggttg gcattgaatacgaagcaacttgctgaaatacctaacattggtgctaaacgtgcggagcta attttcacccaattccaacaggcacaacgacagccagtctcattatggcgtgaagcgata gggatgccttacgccaatagatttatggaagaagtgaatcagtacagggatgtacaatta tcagaaacaggaaccgacagtactttaacagcaaaacaaagaacaaaaattgaggagttt ttacaataccccgaagttaaagaactggttgagacgttaattttacagggaattaatatt aatgtgcatggaatagcttttcacataccctatgaatttcaagatgcagcttctttacag gaagcgatttctttgcagtag

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