Xenorhabdus budapestensis: HGO23_09830
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Entry
HGO23_09830 CDS
T07176
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HGO23_09830 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_09830 (nth)
Enzymes [BR:
xbu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HGO23_09830 (nth)
DNA repair and recombination proteins [BR:
xbu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HGO23_09830 (nth)
Prokaryotic type
HGO23_09830 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QTL38238
LinkDB
All DBs
Position
complement(2234240..2234872)
Genome browser
AA seq
210 aa
AA seq
DB search
MNKQKRVEILTRLRDNNPNPTTELVFNSPFELLISVLLSAQATDVSVNKATARLYPVANT
PQAILDLGVDSLKEYIKTIGLYNTKAENVIKTCRILLEKHQGEVPENRIALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTQFAPGKNVDEVEKKLLQVVPDEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYADKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaaaacgggtcgaaattttaacccgcttacgggataacaaccctaatcca
acgactgaactggttttcaattcaccatttgaactgctgatttcagtattgctgtcagca
caagcaacggacgtcagcgtcaataaagcaactgcaagactttatccggttgccaacacg
ccacaggccatccttgatttgggcgttgatagcttaaaagagtatataaagactatcggg
ttatataacaccaaagccgaaaacgtaattaaaacctgccggatcctgctggaaaagcat
caaggcgaagtaccggaaaatcgcatagcgcttgaagcattaccgggcgtcggtcgtaag
acggccaatgttgttctgaacacggcctttggctggccgacgatagctgtcgatacccat
attttccgtgtcagcaatcggactcaatttgctccgggaaaaaatgtcgatgaagtcgaa
aagaagctattgcaagttgtacctgatgaattcaaagtagattgccaccattggctgatt
ttacacggtcgttatacctgtattgcccgtaaaccacgctgtggatcttgtattattgaa
gatctgtgcgaatatgcggataaaacagagtaa
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