Xenorhabdus budapestensis: HGO23_16030
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Entry
HGO23_16030 CDS
T07176
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu01501
beta-Lactam resistance
xbu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HGO23_16030
01503 Cationic antimicrobial peptide (CAMP) resistance
HGO23_16030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xbu03036
]
HGO23_16030
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbu02000
]
HGO23_16030
01504 Antimicrobial resistance genes [BR:
xbu01504
]
HGO23_16030
Chromosome and associated proteins [BR:
xbu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HGO23_16030
Transporters [BR:
xbu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HGO23_16030
Antimicrobial resistance genes [BR:
xbu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HGO23_16030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND_2
BSH_CusB
HH_EMRA
HH_CzcB
BSH_CzcB
HH_AprE
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QTL39307
UniProt:
A0A2D0J0R7
LinkDB
All DBs
Position
3638990..3640189
Genome browser
AA seq
399 aa
AA seq
DB search
MRKIRGVVPLATLLVLSGSFILSGCNDSQDFQQGAAGEQVPEVGIVTLKTEPLTVITELP
GRTSAYRVAEVRPQVGGIILKRNYKEGSDVHAGESLYQIDSATYQADYSKAKANLARAEA
NESVARLTVERYKSLLGTQYVSKQEFDKANSEYAQAAADVQSLKAALESARISLAYTKVT
SPISGRAGKSTVSEGALVSGGQSNALTTVQQLDPIYVDITQSSDDYLRLKNEIAKGTVQR
ENGKPKIHLITDAGKMYSQTGHLEFSDITVDETTASITMRAVFPNPNEELLPGMFVRTKL
EEGVRKNAILIPQQGVTRTPRGQATTFVIDKDNKVELRYINATQAVGNKWLVTKGLKAGD
RVIVTGLQKIAPGITVQPTEVDLDAKPTTTKTESAKKSQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaatcagaggggttgtgcctctggccacattactggtactttcaggcagcttc
attctctcaggatgtaatgacagtcaagattttcagcaaggggctgctggcgagcaggtt
cctgaagtcggtatcgtaacgctgaaaactgaacctctgacagtgatcacagaattaccg
ggcagaacttcagcttatcgcgttgctgaggtacgccctcaagtcggcggcatcattctg
aaacgtaactacaaagaaggcagtgatgttcatgccggagaatctttatatcaaattgat
tcagcaacctatcaggcagattacagtaaggccaaagcaaatctggccagagcagaagca
aacgagagcgtcgctcgtttaactgttgaacgctataagtcattgctgggtacacaatat
gttagtaaacaagaatttgataaagcaaattctgaatatgctcaggctgcggcagatgtt
caatctttgaaagcggcattggaaagtgcccgcataagcttagcttatactaaagtcact
tctcccatctcaggacgtgcaggtaaatctaccgtctctgaaggagcactggtttctggc
gggcagtcaaatgctttgacaacggttcaacaacttgatcctatctatgttgatatcacg
caatccagcgatgactatctgcggcttaagaatgagatcgcaaaaggcacagttcaacga
gaaaacggtaagcccaaaattcacttaatcactgatgcagggaaaatgtatagccagact
ggtcaccttgagttttcagacattactgtggatgaaacaacggcttccataacaatgcgt
gctgttttcccgaatccaaatgaagaactacttcccggtatgtttgtccgtaccaaactg
gaagaaggagtacgcaaaaatgcgattttaattcctcaacaaggggtgactagaacacct
cgcggtcaagcaacgacattcgtcattgataaagataacaaagtggaattgcgttatatc
aatgccactcaggccgttggcaacaaatggctggttaccaaaggcctgaaagcgggtgac
agagtcatcgtcacagggttgcagaaaatcgcgccgggaataacagttcagccaacagaa
gttgatttggatgccaagcctacaacaactaaaactgaatcagccaaaaaatctcaataa
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