Xenorhabdus bovienii CS03: XBW1_0265 Help Entry XBW1_0265         CDS       T03845                                  Symbol ligB Name (GenBank) DNA ligase B   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism xbv  Xenorhabdus bovienii CS03 Pathway xbv03030   DNA replication xbv03410   Base excision repair xbv03420   Nucleotide excision repair xbv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:xbv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     XBW1_0265 (ligB)    03410 Base excision repair     XBW1_0265 (ligB)    03420 Nucleotide excision repair     XBW1_0265 (ligB)    03430 Mismatch repair     XBW1_0265 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:xbv03032]     XBW1_0265 (ligB)    03400 DNA repair and recombination proteins [BR:xbv03400]     XBW1_0265 (ligB) Enzymes [BR:xbv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      XBW1_0265 (ligB) DNA replication proteins [BR:xbv03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      XBW1_0265 (ligB) DNA repair and recombination proteins [BR:xbv03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      XBW1_0265 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      XBW1_0265 (ligB)    MMR (mismatch excision repair)     DNA ligase      XBW1_0265 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       XBW1_0265 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_OB DNA_ligase_aden RNA_ligase HHH_5 Motif Other DBs NCBI-ProteinID:  CDM87624 UniProt:  A0A0B6X5J1 LinkDB All DBs Position complement(255264..257123) Genome browser AA seq 619 aa AA seqDB search MLNFLIMILALLFGIPVALAGMAEQAPAKFTESAETGSTGNMADCPVWSQEKIQREMQHL TRQMAEWDQLYRQQGISEIDDEIYDQLLETLTLWRTCLHQMSDSTFSVAVPREGKQPHPV QHTGLNKLKGIKEIHQWLQGRSAVWLQPKVDGVAVTLVYEKGRLAGLISRGNGSEGTNWM DKSPFITRIPKQIKNAPERLVLQGELFWQKDSHRQSIVGSQGARSKVAGLMMRKSSAPEL GQIGIFIWGWPDGPDEMAVKLERLASMGFPTAQQYSHRIISAQDAEKRWKSYFIQPLPFA TDGVVLRQETEPTGRQWRAGSNSWAVAWKYPLQQQLTTVRDVHFKIGRTGRISVLLELEK VKLDDRQVRRVNLGSVRRWKQWNVYPGDKVTVALAGHGVPKLDKVVWRIAERPDIQPPNA QDFHSLSCLVSHDSCQQQFIARLTWLGENLKMKGVGQGTWAALVKYGLVTHLTDWLALDI AQLTEVPNIGTKRAELIFAQFQQARLQPLSSWREAIGLPYANRFTDEMGWQWDLLLSETG MKNPLTAKQTAKIAAFLQHPEIRALVHALTVYRIGEKQGSEENKVGEKKEAEPISHSEAR EQERAPDALNNVSDQNRHN NT seq 1860 nt NT seq  +upstreamnt  +downstreamnt atgcttaattttctcatcatgatattggcgctgttgtttggaatacctgtggcattggca ggaatggcagagcaggcaccagcaaaatttactgaaagcgcagaaaccggcagtacagga aacatggcggattgtcctgtttggtcacaggagaaaatccaacgtgaaatgcagcacctg acacggcagatggcggagtgggatcagctttatcgtcaacagggcatcagtgaaatcgat gatgaaatctatgatcaactattggaaaccctgacactttggcgaacttgtttacatcag atgtcagacagcacgttttctgttgctgtgccacgggagggaaaacaacctcaccctgtg cagcataccggcttaaacaagctgaaagggataaaggaaattcatcagtggctacaggga cggtcggctgtttggctgcaacccaaagttgatggtgttgcggtcacgttggtttatgaa aaaggccgactggcggggttaatcagtcgtggcaatggttcggaaggaacgaattggatg gacaaaagtccatttattacccgcattcccaaacagataaaaaatgcaccggagcgcttg gtgttacaaggtgagttgttctggcagaaggatagtcaccgccaatctattgtcggtagt caaggagcgcgcagcaaggtcgcagggctaatgatgcgtaagtcatctgcgccagaactt ggtcagatagggatatttatctggggctggccagatgggccagatgagatggcagtaaag ctggagcgattggcatcaatggggtttcccactgcacagcaatatagccaccgaattatc agtgcgcaagatgctgagaaaagatggaaatcctattttatccagccactcccttttgcc acagatggcgttgtcttaagacaggaaactgagcccactggccggcagtggcgcgcaggc tcaaacagttgggcggttgcctggaagtatccattgcagcagcaattgacaaccgtgaga gatgtccatttcaagataggccggacaggaaggatctccgttttgctggagctggaaaaa gtgaagctggatgacaggcaggtcaggcgggtcaatctcggttccgtcagacgctggaaa cagtggaacgtttatccgggagataaagttacggtagcgctggcggggcatggcgttccg aaactcgataaagtggtatggcgtattgctgaacggcctgatattcagccaccgaatgcg caggacttccattcgctgagttgccttgtatcccatgatagttgccagcaacaatttatt gctcgtctgacatggcttggggaaaatctgaaaatgaaaggcgttgggcaaggaacatgg gcagctttggtgaaatatgggctggtgacacatttaacggattggctggcgctggatatt gcacaacttactgaagtgccaaacataggaaccaaacgtgccgagttgatttttgcccaa ttccagcaggcaagattacagccgctttcgtcatggcgtgaagcgatagggttgccttat gccaatcgatttacggatgaaatgggctggcaatgggatttgctgttatccgaaacaggc atgaaaaatccattaacggcaaagcaaaccgcaaaaattgcagcctttttgcagcatcca gagattagagcgttagttcatgcattaactgtatatagaattggagaaaagcagggaagt gaggagaataaggttggggagaagaaagaagcggagccgataagtcattcagaagcaagg gagcaagagcgtgctcccgatgctcttaataatgtcagtgatcagaaccgtcataattga

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