Xiphophorus couchianus (Monterrey platyfish): 114133417
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Entry
114133417 CDS
T05908
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114133417
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
114133417
04261 Adrenergic signaling in cardiomyocytes
114133417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114133417
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114133417
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
DUF2201
VWA_CoxE
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
114133417
NCBI-ProteinID:
XP_027855110
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Position
2:16147480..16219983
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AA seq
1083 aa
AA seq
DB search
MDTCRVRTWLFLLLLWQEGCLPSQFPTQLMIKEWVDQMQKELVTLADTATAGQSLIQIFL
KNQHLYTVEQNDAEELVARAARNIEQLLRKRSAALEKLATAAEVFQKEHAWKDEFEDDEI
AYYNSKDNLDANETEGRKYRIRPDFKEDPSFKRLTDHNHTAVHIPTDIYDGSTIVLNELN
WTEALEDVFKKNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNTRVKNTACF
DHLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFEQLYSTNVSRANCNKIIMLFTDG
GEERAQSILEKYNADKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADKQAKQVQWTNVYLDALELGLVITGTLPVFNRTKTVDDRNGEHQNQL
ILGVMAIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFL
DAELENDIKVEIRRMMIDGEIGESTIDTLVKTQDERYIDRGVRTYTWAPVNGTDYSLALV
LPKYSENFIQAKLGDDIKQAISSPWGEEAMETIQLDRFDEFGYTYIAPREYCKEVKVSLN
NTQFLLNFNQYIDRSTADACNESLVKRLILDAGLTAELVKVWKEQSVDGTVARFVATDGG
ITRVYPRSAGEEWTENPETYDSSFYKRTLDNAIYIFTAPSFNTEVREPVSESGILVSKAI
DLIIDKVMLKPAVVGVKLNVSFWMNSFINATLKLNCKDEICGCLRNDKHVDCVILDDGGF
LLMSNQEEYISLIGQFFGEVDPVLMINLVNTSLYSFNKTYDYQSVCDPEKDNKAAAGPRS
IFVPTIADVLSIGWWASNAAWSMLQQLFFSLLFPNLLEAVESADDDIPDAMFKESCITEQ
TQYFFDNDERSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKATCLSCDPRPLRQAEQP
SEGPNPCELAQSPRYRKGPDVCFDNNENEDDSDCGGGNHLSPSLWSMLGLQLLFWLTKFL
LQS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgcagggtacgaacctggctgttcctgctcctgctgtggcaggagggctgt
ttgccatcccagttccccacacagctcatgattaaggaatgggttgatcaaatgcagaaa
gagctcgtcaccttggcagacacagccacagcagggcagagcctcattcagatttttctg
aaaaatcagcatctctatactgtagagcaaaatgacgcagaagagctggtggccagagca
gccaggaacatagaacagctgctgcggaagaggtctgctgccttggagaaactggccaca
gctgcagaggtattccagaaggaacatgcatggaaagacgagtttgaggatgatgaaatt
gcttactacaattcaaaggacaacctggatgcaaatgagacagaggggagaaaatacagg
attcgaccagactttaaagaggacccttcattcaaacggttgactgatcacaaccataca
gctgtccacattcccactgacatctatgatggctctaccatcgtgctgaatgagctgaac
tggacagaggcactggaggatgtctttaaaaagaacagagaagatgacccaacacttctt
tggcaggtgtttggcagtgctacaggcctggctcgctactacccagcctctccgtggatg
gatgctcgcaaaactcccagcaaaattgatctgtatgatgtccgcaggaggccatggtac
attcaaggggctgcctcacccaaagatatgctaatccttgtggatgcgagtggtagtgtc
tcaggtctgactctgaaactaatcagaacatccgtcagtgagatgctagagacattgtct
gatgatgattacgtcaatgttgtttattttaacactagagtgaagaacacagcctgcttc
gaccatctggttcaggccaacgtgaggaacaagaagctgctgaaagatgctgttcagaac
atcacagccaaaggaattacaaattacactaaaggctttgagtttgcatttgaacagctt
tattcgactaatgtgagtagagcaaactgcaacaagatcatcatgttgtttactgatgga
ggagaggaacgagctcagtccatactggaaaaatataatgcagacaaaaaggtcagaatc
ttcaccttttcagttggacaacacaactatgataaaggacccatccagtggatggcctgc
tccaacaaaggttacttttatgagattccttccattggagccatcaggataaacacacag
gaatatctagatgtcttgggaaggcccatggttctagcagacaaacaggccaaacaagtc
cagtggactaatgtctatcttgatgctctggaactaggtctggtcattactggaacactg
cctgttttcaacagaacaaagactgttgatgacaggaacggagagcatcaaaatcagttg
attttgggcgtaatggcgattgatgtatctcttgacgacatcaagaaactcacaccacgc
ttcacaattggtcctaatggatactactttgctattgatcccaacggatatgttctgctg
catcccaatctccagccaaagaatcctaaatttcaggagcctgtgaccttggactttctt
gatgctgagttggaaaatgacataaaagtggagataagaagaatgatgattgatggagaa
ataggagaaagtactattgatactttggttaaaactcaagatgagagatatatagacaga
ggggtaagaacctacacatgggctccagtcaatggaacagattacagcctggcccttgtt
ttacctaaatacagtgaaaacttcattcaagctaaacttggggacgacataaaacaagcc
atctcttcaccttggggggaagaagccatggagactattcagctggataggtttgacgag
tttggttatacttacattgctccaagggaatactgcaaagaggtgaaggtatctctcaac
aacacccagtttcttctcaacttcaaccagtacattgacagaagtactgcagatgcatgc
aatgagtctctcgtgaaacgactcatcctggatgcaggcctgacagctgagctggttaaa
gtttggaaagagcagtcagtagatggaacagtagcaaggtttgtcgcaacagatggagga
attactagagtttatccgagaagtgctggagaagaatggacagagaatcctgagacatat
gattccagcttctacaagaggactttggataatgcaatatatatattcacagctccatct
tttaacacagaggtcagggagcctgtgtccgaatcgggaatcctggtgagcaaagcaata
gacctcatcatcgataaagtcatgctcaaaccagcagtggtgggagtaaaactcaatgtt
tcattctggatgaacagttttatcaatgcaacactgaaacttaattgcaaagatgagatt
tgtggctgtcttaggaatgacaagcatgtggattgtgtaatattggatgatggaggattt
ctgctcatgtctaatcaagaagagtatatttccttgataggtcagttctttggcgaggtt
gatccggtgctgatgataaacttggtcaacacatccctgtactccttcaacaagacatat
gactatcagtctgtgtgtgacccagagaaggacaacaaggcagcagcaggacctcgctcc
atatttgtgcctactattgcagacgtcctcagtataggctggtgggcttccaatgctgct
tggtcaatgcttcaacagcttttcttcagtcttttgttccctaaccttttagaagcagtg
gagtcagcagatgatgacataccagatgccatgttcaaagaaagctgcatcacagagcag
actcagtacttttttgacaatgatgaaagatcatactcgggtgtcctagactgtggaaac
tgctccaggatgtatcgtgctgagaagcttcccaacacaaacctggtgtttctgatcact
gatgccaaggcaacatgtttatcctgtgatcccaggccacttcgtcaggctgagcaaccc
tctgaaggaccaaatccttgtgagctggctcagagccccagataccgcaaagggcctgat
gtatgctttgacaacaatgaaaatgaggatgattctgattgtggaggagggaaccaccta
agtccaagtctctggtcaatgcttggcctccaattgctgttctggctcaccaaattctta
ctacagtcatga
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