Xiphophorus couchianus (Monterrey platyfish): 114133615
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Entry
114133615 CDS
T05908
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114133615
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114133615
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_4
Ank_3
Ank_5
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
114133615
NCBI-ProteinID:
XP_027855455
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Position
18:complement(5982527..5991415)
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AA seq
850 aa
AA seq
DB search
MIKRSRTLTLRQSQKSRWISERRALMTGHVGAKHRRQTARGAGYLFQAHPSSCVSITEEV
FLEAAEYGNIPEVRRMLEELPHLNINCVNYMGQNALQLAVASEHLEVVKLLLKRKELAKV
GDALLLAISKGYIRIVEAILSHEAFADGQRLTNNPSHDETRDDFFSYDEDGTRFSHDITP
IILASQCHEYEIVHMLLLRGAHIERPHDYFCQCRACIEQQRLDTFCHSQSRISAYKGLAS
PAYLCLSSQDPVMAALELSNELAVLANTEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEV
EAVLNGDMESFANTATSAKLNLIRLKLAIKYEVKKFVAHPNCQQHLRSIWYENLTGLHQQ
TVAVKVLFVFGVAVGLPVLAFIYWIAPSSKLGKLMRGPFLKFVAHAASFIIFLCLLVLNA
ADRFAGTSLLPNMTTHDYPSQVFRMKTTSFTWMEILIIFWVIGKIWEECKDIWSQDIQEY
ILEPWNLLDFSILAIFMTSFIARLMAFWHAHSAQCYIDKHPFNMTLPSEVQYFQLARIHW
MPSDPQLISEGLYAIAIVLSFSRIAYILPANERFGPLQISLGRTVKDIFQFMVIFITVFV
AFMVGMFDLYSYYLGAKHNVAFTTIEESFKTLFWAIFGLSEVKSVVLNINHKFIENIGYV
LYGVYNIIMVIVLLNMLIAMFNNSFQEIEDDADVEWKFARAKLWFSYFEHGSTLPVPFNL
VPSPKSVVSFLLGIKTLIRSSRKSKENSNNDMDLKNLREHGGLKEDSSVQPTRHQKVMNC
LIKRYIFKAQRDKDNDEVNEGELREIKQDISSLRYELLERGNHDLNTLADLVRQLGEVVQ
KEEQRADVIS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacgcagcaggactctcactttgaggcagtctcaaaaatccagatggatcagc
gaaaggagagccttgatgacggggcatgttggagccaaacatcggagacaaacagctcgg
ggagctggttacctgttccaagctcacccttcctcctgcgtctccattactgaggaggtg
ttcctagaagctgcggagtacggcaacattcctgaagtgaggcggatgctggaggagctt
ccacacctcaacatcaactgcgtcaactacatggggcagaatgcactgcagctggcagtc
gcaagtgagcacttagaagtggtcaagcttttgcttaagaggaaagaacttgcaaaagtg
ggggatgctttgctgttagccatcagtaaagggtacatccgcatagtggaagccatttta
agccacgaggcctttgcagatggtcagaggttgacgaacaaccccagtcatgacgagaca
cgggacgactttttctcctacgatgaggatggcacgcgtttctctcatgacatcactcct
attatcctggcttctcagtgtcacgagtacgagatagtacacatgctacttttgaggggg
gcccatatagagcgtccccatgactacttctgtcagtgcagggcctgcattgagcagcag
aggcttgacaccttctgccactctcagtctcgtatcagtgcttacaaaggcctcgccagc
ccagcgtatctttgcctttcgagtcaggatcctgtgatggcagctttggagctgagcaat
gagctcgcagttctggccaacacagagaaagagttcaagaatgactacaagaaattgtcc
atgcagtgtaaagactttgtggtgggactcttggatttgtgtcggaacacggaggaagta
gaggcggtcctgaatggtgacatggaatcctttgctaacacagcaacctctgccaaactg
aacctgatcaggctaaagctggcaataaaatatgaagttaaaaagtttgtggcccatcca
aactgccagcagcatcttcgatcaatctggtatgagaacctgactggactgcatcagcaa
acagttgcagttaaagttctttttgtcttcggtgtagctgttgggttacctgtcctagct
tttatttactggatagcaccatcaagtaagttggggaaactcatgcgtggacccttcctg
aagtttgtggctcatgcagcttccttcatcatattcctctgtttgctggttctaaacgca
gcggaccgcttcgcaggaacatcactgctgccgaacatgaccacccatgattatccctcg
caggttttccggatgaagaccaccagtttcacctggatggagattcttatcattttctgg
gttataggtaagatatgggaagaatgtaaagatatctggtcacaggatattcaggaatac
atcttagaaccatggaaccttctggattttagtattttggccatttttatgacctctttc
atagcaagattaatggctttctggcacgcacattctgcacagtgctacattgacaagcat
ccattcaacatgaccttgccttctgaggtacaatattttcagctggcaagaattcactgg
atgccctcagaccctcagcttatctccgaaggtctctatgcgattgccattgttctgagt
ttttcccgcattgcgtacatcctgcctgccaacgagaggtttgggccgttgcagatctct
ctgggaagaacggtgaaagacattttccagttcatggtgattttcataacggtgtttgtc
gctttcatggtgggaatgttcgatctatactcatactaccttggagccaaacacaacgtt
gcctttacaacgattgaagaaagttttaaaacattattctgggccatcttcggactgtca
gaagtaaaatctgtggtattaaacatcaaccataagttcattgagaacataggctatgtt
ctgtatggggtgtacaacatcatcatggtgattgttctgctgaacatgctcatagccatg
ttcaacaactccttccaggaaatcgaggatgatgctgatgtggagtggaaatttgcccga
gccaagctgtggttttcctactttgagcatggcagcactctgcctgtacccttcaacctc
gtacccagccccaaatctgtggtgtccttcctactcgggataaagacattgatcagatct
tcaagaaaaagcaaagagaattcaaacaatgacatggatcttaaaaatttaagggaacac
ggaggactgaaggaggactcatctgttcaacctacacgtcatcaaaaagtaatgaactgc
ctcatcaaaagatacatatttaaagcacagagagataaagataacgacgaagttaacgaa
ggtgaattgagagagatcaaacaggacatctcgagccttcggtatgagctgctggaaaga
gggaaccatgatttaaacacactggccgatcttgtcaggcagctgggagaggttgtgcag
aaagaagagcagagagcggatgtcatttcttaa
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