Xiphophorus couchianus (Monterrey platyfish): 114134601
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Entry
114134601 CDS
T05908
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114134601 (exd2)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
114134601 (exd2)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
114134601 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Motif
Other DBs
NCBI-GeneID:
114134601
NCBI-ProteinID:
XP_027857118
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All DBs
Position
19:2496715..2504967
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AA seq
644 aa
AA seq
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MSPRGPLTTVITTVVGAALGGLLVWQVYRTKRKKPSSVQQAVEPTVPLHPVENAPAHTES
RQTQLPRLAHDEFKTAECQTENAPLAVRIPTCEQLLAVRPVTVSSEEDWQEMWPLMQKEL
SVFPVLGLDCEWVKAQSVSMKGRSSAVSLLQMATYSGRCVLVRLLTFRGGQQPFPLSFVE
VLRDPHVLKVGVGCYDDGKRLTRDYGLSLATTVDLRHLALRERRSSVSNGLSLKSLAVDL
LNVPLDKSLELRCSDWEADQLTPEQTTYAARDAQISVALFLRLLGLQTETGPALSSGSSY
AELVSRCQGLVDVPFRGRGDGDDGAPERERRRRTRKPAVNDSPESGDQQVPDPRKNNRRK
PLGVGYSARKSPLYDNCFLYAPDGQPLCTCDKKKALWYLDKGIGELQSEDPFIVRLLFEP
SGRPDSQQDYYLTAKENLCVVCGKADSYIRKNIVPHEYRRHFPTEMKDHNSHDILLLCTG
CHAASNVHDGSLKQQLATEFAAPQGCEEGVRLLEDSDRRRVRSAARALLSAKDGLPEQRR
DELQLLIRNYMDMDEEQELTNEALQEAAALETRILNEAYVPHGLKVVRAHAQRGLRGLME
LESRWRRHFLTTMQPRHLPPLWSVDHNHSKFLRKFGEDLPIKLN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcgagggcctttaaccaccgtcataacaaccgttgtgggggcggccttaggc
gggctgctggtgtggcaggtgtatcgaacgaagcggaagaagccgtcttctgtccagcag
gcggtggaaccgacggtccctctgcatcccgttgaaaatgctccggcgcatacggagagt
cgacaaacccagctgccgcgcctggctcacgacgagtttaaaacggcggagtgtcagacc
gaaaatgcgccccttgctgtccggattccgacctgcgagcagctgctggcggtgagaccg
gtgacggtgagctccgaggaggactggcaggagatgtggccgctgatgcagaaggagctg
tcggtgttcccggttctggggctcgactgtgaatgggtaaaggcccaaagcgtgtcgatg
aaaggcagatcgtcggcggtgtctctgctgcagatggccacctactcgggccggtgcgtt
ctggtgaggctgctgacgttccgcggcggccagcagccgttcccgctcagcttcgtggaa
gttctcagagatccgcacgttctgaaggttggagtgggttgctatgacgacgggaagcgt
ctgacgcgcgactacggcctgtccctggccaccaccgtcgacctgcgccaccttgcctta
agggaaaggcgatcctctgtcagtaacggcctcagtctcaagtccttggctgtagatctg
ttaaatgtgcctctggataagtctctggagttgcgctgcagcgactgggaagcggatcag
ttaactccagagcagacgacgtacgccgccagagacgctcagatttctgtggcgctcttc
ctccgtctcctcggcctccagaccgaaaccggtcccgccctttccagcgggagctcctac
gcggagctggtgtcccgctgccagggtctggtggacgtccccttccgaggccgcggggac
ggagacgacggcgcccccgaacgcgagcggagacggaggacgcggaagccggcggtgaac
gacagcccggagtctggagaccagcaagtcccagaccctcggaagaacaaccggaggaaa
ccgctgggcgtcggctactccgccaggaagtctccgctctacgataactgctttctgtac
gcgcctgatggccagcctctctgtacgtgcgacaaaaagaaagccctgtggtacctggac
aaaggaatcggagagctgcagagtgaagaccccttcatcgtgcggctgctcttcgagccg
tcgggacgccccgactcccagcaggactactacctgaccgcaaaggaaaacctctgtgtc
gtctgtgggaaagcagactcctacatcaggaaaaacatcgtaccgcacgagtaccggcga
catttccccacggagatgaaggaccacaactcccacgacatcctgctgctctgcaccggc
tgccacgccgcctccaacgtgcacgacggctccctgaagcagcagctggccaccgagttc
gccgcccctcagggctgcgaggagggcgtccggctgctggaggactcggaccgccggcgg
gtgcgctcggcggcccgggcgctgctcagcgccaaggacgggctgccggagcagcggcgg
gacgagctgcagctgctcatcaggaactacatggacatggacgaggagcaggagctgacc
aacgaggcgctgcaggaggccgccgccctggagaccaggatcctgaacgaggcctacgtt
cctcacggccttaaggtggtgcgcgcccacgcccagcggggcctgcggggcctcatggag
ctggagagtcgctggaggcgtcacttcctgaccaccatgcagcctcgccacctgccccct
ctctggtccgtggaccacaaccacagcaagttcctccgcaagttcggagaggacctgccc
atcaaactcaactga
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