Xiphophorus couchianus (Monterrey platyfish): 114135202
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Entry
114135202 CDS
T05908
Name
(RefSeq) msx2-interacting protein-like isoform X1
KO
K25100
Msx2-interacting protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114135202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114135202
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
114135202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_PARP14_3
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
114135202
NCBI-ProteinID:
XP_027858063
LinkDB
All DBs
Position
20:complement(16261871..16281180)
Genome browser
AA seq
3137 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIMEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDSSPSGSRDVAGFPRGTVGPVFGPPVSL
HTREGRFERRIDGSSESRERAYDHSPYGHHERSGTFDRQRHYNADYYRDRPVFAPAGPGS
SAIGGSFEAADPHFDSRIRDPFTLTNSTRRDLYRDDRGRRVDRSYHHRRSRSSHSSQSRH
PSPQRTAGQTSKTPHSPKRTPLSPGRGPRSRSQSRSSSSDSVSSTSSTGSGSDSNSSSSD
GSRARSVQSSAAPQTCLVMDSEEPRRSFGIKVQNLPVRSTDTSLKDGLFHEFKKYGKVNS
VQIHGASEDRYGLVFFRQQEDQEKALSVSKGKLFFGMLIEVTAWNGPETENENDYRPLDG
RLDEFHPKATRTLFIGNLEKTTSYQQLLDIFQRFGEIVDIDIKKVNGIPQYAFVQYSDIG
SVCKAIKKMDAEYLGNNRLKLGFGKSIPTTCVWLDGLTPNITEQYLTRHFMRYGHVVKVV
FDRIKEMALILYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQNAFYRSMQASGQDIR
DFYEVPPERREDRRPPYHEFTAERAYYENIRTTGLYPEEARREYAARSRERFSELEHYQG
EHFDPRYHEDPRDYRDYRDPFEQDIRKYTYIQRERERERERFEADRSRWSPSQRRAVTPT
ISPSPSERAARDSERRVYSQSSERSGSVSSMSPPHLDKSEKTLLDHAAKSEKSAQPDRMA
GAEKIKRPKRKDKTDKEKTEKNKSRKGKGQSPASQIPETEPDAAFDGGRGRGSDQDVHEK
PKSKVDGDALSGNQLTASQDSVKTETTKGDIAELDGKPKLKKQPKSDIGNDGKDSAVDSD
RLAARKRRFGDLGGKTVRQKRSRHEEEDGSQSSDFGSSTTYVKEPDADKHKDPQRRDARL
KTEKSVTQKDGLEDLRGQREKSEGSADLPESKRQQGSTSSRRVSLEGNSDQSILREQEQT
AAFKPSQNAETNKNAKTKEDHVDIDLSQSYRKQMEQNRRLHMQQQQQRESDKLKKAESLL
KNETEDLEHRSLVHEVGKPPEDVTDNFPSHKLSDQFEAEPGIKRERFYRRQKSEDPDWSS
TPSPGHQVFSQHADEDFMDASLKELSRNNQKIHPELELLVKRTHNTQVNKTNTPINIGEE
DQQKRWESRGKQDLLPNLNFSRGLGKNLHNRKPSEYGLWHDLEPGEVRSDSEEDRENKPL
SPAPSTSMPFSERPRPDRFSDPKLAHLERNKFYSFALDQTITPDTKALLERAKSLSSSRE
DNWSFLDYDSHFVNFRSQKDTEKVESAPRPTPSWYMKKKKIRSGSEDKLDDRKEEPKPEE
QERRELFASRFLHSAVFELDSRRLQHLERKYEELEHMLNQQASQQGAEGELETGPVVLFH
SRFLELTQLQQQKNKSQQLQEDKGNTVCTSENKEEKPSEQEQQDLRSNDMPESSVAAEIK
PISPVEQVAPEPKLTPNLVIQSASKDTPSSHQKCVLPTPPADVCPPMSFIKEETKEEVKE
SEDVVPMHCSPTETLKSEPAPETVPETNISEENLEFLEEDAKPLIDEQTNDPGSHEELVS
RSEPEPSPEMSQPEVPTASSPVQLSVAEEADLIKEDPLSTCQKTVESEGEKKLEEVSKEE
ISVDSDAIEEPVSFQKENKTKEIKTKKGRQSPAQVPLTSVSEKQATRKSERIDKDKLKRG
SSPRAETKSSAKSPTPGSDHDHSEQSIPISRARTRRNVKSVYATPVEDDAPTRGKETESP
RSARKRGTEKEALQHSTESEPPTPAPAKQRGRPPKNRKPIEEVSAAKTEKIKMDKDADSN
ESENGERVSRVAKGKMSPYLTKGSSNPIPSVPGSKKGDKTETADENQVIHFTEAEDLSSQ
HSSSSGKDSSVKSDVKKGSELDKDVHEKLCEEKSNGKETDSLLGEEKPAPEKEKIIKGKV
KAAKPHVFRDLQVILDVKEVKDHVSRCTTANKECPNEEKEKKDVDSSKSSSLQERELEQA
VENIAKLTEPALPTELPTPVPPAEVKSDPEEEKPCNPASETELMAAIDSITGEDVSVPLT
PAAPVSTEVCSEPEVQEFVPPVKVEEPETALQEEAVFSNTPKKSYKGRPKTPKRPKAPKH
ARKDVKEELSEELTVPLAESTVSDVKIVAEKPPSAAAAAVITPTTWKSEAELPAVKAAES
ELPSPVEEQTQAVKPTHPQAKSPIYPQQLPAECVSLSLASNRPNIRSIQTSRAPVSPPDW
RHQSKDPCVTSAHIMSVAAKEGQLTTSDSNSKELDQGTSDLRQILMKPKTITLPGGGSSA
PTNLPSLRDQNPSESNPAITAALHNRSPLPESKTPTHSVPPIVRTPSTLPGETKSVISVI
ASTATSVISRVCNPPETEEKPNLIIGNPSMDVTLPKTAYRPSKDDGGPYHGATFSSGSCS
GLRVNTSEGVVVLSHSGQKTEGPLRISAKISQIPQATAGDIESQQLVPIPQIKQDVYSHS
QSGHQKGSSQTDHGHPGKLQSALSSIKQESGSCSLEKMDSAYQAGPQGVVKRLPQGNQQV
MGYHQDYLQLKHQKKMENVDPHGTDGAKPSWTSTVSPAISPHLPSPPGNHVGFVTSTGDR
GPSHLGSIKQEPRSPRKSGHSHPPFTKVSSPLGSSSPKGIPVMISSALNPMQQYITGVHH
PEQSVIMPPHNVPGGVGRMSPHCVSQSITVGHLVQGEVRVNTPPLSVMNYVHSEKLASPW
SGSLQPRSSSPQAVSRDKVLKVNHGSLRGHEGEQDESRHFHQAGRPSATLPTDTRGALRT
NMETFIAKRDMRVHLHQQGERLTLDPHSGHIQETLPPSLSPRAHMLPKGVSEKDIKSLEA
KRPHSPVIQKDGIMAIRQSGGAIASPQRVSLMPPGPSGSFSEYSGMYPNRMHSQIPDAPV
GHNQPPLNVTPSMGAELQAKPDGKMTQTVNMVQLLTKYPIVWQGLLALKNDTAAVQLHFV
CGNKALAHRSLPLQEGGALLRIVQRMRLEASQLESVARRMTGDSDFCLLLALPCGRDQDD
VINQTQALKAAFINYLQAKLAAGIINIPNPGSNQPAYVLQIFPPCEFSESHLSQLAPDLL
NRISSISPHLMIVITSV
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctctgggtgggaaatttacccgaacatgttcgcgaggag
aaaatcatggagcattttaaaaggtatggccgcgtggagagcgtcaaggttctgcgaaag
cgagggtcagagggcggtgttgcagcctttgtggattttgtggatatcaaaagtgcacag
aaggctcacaatgctgtcaataagatgggagacagagaccttcggactgactacaatgag
ccggggtcagtccccagtgctgtgcggggcctcgaagacagctccccctccggcagtcga
gacgttgcaggattccctaggggaacagttggcccagtgtttggcccacctgtgtcccta
cacacccgagagggacgttttgaacggagaatagatggtagctcagaaagccgtgaacgt
gcttatgatcacagcccatatggccaccatgagcgcagtgggacttttgacagacaacgt
cactacaacgctgattattaccgcgatcgcccagtgtttgcacccgccggccccggcagc
agtgccattggagggagttttgaggcagcagacccacattttgactctagaatacgagac
ccatttacccttaccaattcaacacggcgagacctctacagagatgatagggggagacgt
gttgatcgatcttatcaccaccgtcgaagcagatcatctcattcctcccagtcgaggcat
ccgtctcctcagcggaccgcagggcaaacctcaaaaacccctcattctcctaaaagaacc
cctttgtcccccggaagaggcccaaggtcgagatctcaaagcagatcttcaagctccgac
tctgtcagcagcaccagcagcacaggcagtggcagcgactcaaacagcagctccagcgat
ggttcccgggcccgctccgttcagtcgtcggctgctccccagacatgtttagtgatggac
tctgaagagcctcgaagaagctttgggattaaagtgcaaaacttaccagtgcgctccaca
gatacaagtttaaaagatggactcttccatgaattcaagaaatatgggaaagtaaattca
gtgcagattcatggcgcatcagaggaccgctatggattagtgttcttcagacagcaagag
gaccaagagaaagccctcagcgtctccaagggaaagctgttctttggcatgcttattgag
gttacagcctggaatggtccagaaacagagaatgaaaatgactacagaccgttagatgga
cggctagacgagttccaccccaaggctacaaggacgctgtttataggcaaccttgaaaag
accaccagttatcagcaactcctggacatttttcagcgctttggagaaattgttgacatc
gacatcaagaaagtaaatgggattcctcagtatgcttttgtccagtactctgatattggc
agcgtttgcaaggccataaagaaaatggatgcagaatatttggggaacaataggcttaag
cttggttttgggaagagtatacctactacatgtgtttggcttgatgggttgacccccaac
atcacagagcaatacctcacacggcatttcatgcgttacgggcacgtagttaaagtcgta
tttgacagaataaaggagatggcgctcatcttgtacaacaacacggattttgctcaggca
gctgtgcgggagaccaaaggctggaagatcggtggtaataaaattaaggtggattttgca
agtcaggagagccagaatgcattttaccgctcaatgcaagcctctggacaagacattaga
gacttttatgaagttccaccagaacgacgagaggatcgcagacctccttatcatgagttt
acagcagagagagcttactatgagaatataagaaccactggcctttatccagaggaagct
cgcagagagtacgccgcacgtagcagagagcgtttttctgaactggagcattatcaggga
gaacactttgacccacgttatcatgaggatccaagagactacagggattaccgagacccc
tttgagcaggacatcagaaaatatacctacattcaaagagagcgagaaagagagcgggag
cgtttcgaggctgatcgcagcaggtggagcccatcgcaaagaagagctgtcactcccaca
atttccccttctccatccgaacgtgctgccagagactcagaacggcgtgtttacagccag
tcttcagagaggagcggcagcgtgagctccatgtcacctccacatttggacaaatctgaa
aagaccttgctagatcacgcagcaaagagtgagaagagcgctcagcccgatcgcatggca
ggggcagagaaaatcaaacgtccaaaaagaaaagataaaactgacaaagaaaagactgaa
aagaataaatcaaggaaaggaaagggtcagtccccggctagccagataccagaaacagag
ccagatgctgcttttgatggaggaagaggaaggggatcagaccaagatgttcatgagaaa
ccgaaatctaaggtggatggagacgctctgtctggaaaccagttaacagcttctcaagac
tctgtaaaaactgaaacgactaaaggggatattgcagagctagacggaaaacccaaactt
aaaaaacaaccgaagtctgatattggaaacgatggaaaggattcagcagtggattcagat
cgcctcgctgcaagaaaaaggcgctttggggatttaggtggcaagactgttcgtcagaaa
agaagcaggcatgaggaggaggatggcagtcagtcatcagactttggctccagtaccaca
tatgtgaaagaaccagacgcagacaaacacaaagatcctcagcgacgagatgcacgactc
aaaacagaaaaaagtgtcactcaaaaggatggactagaggatctcaggggacaaagagaa
aaatccgaaggttctgcagatctgccagagtcaaaacgacaacaaggaagcacttcctcc
agaagggtctcactagaggggaattcagatcaaagcattttaagagagcaagaacaaact
gctgcattcaagcctagtcagaatgctgaaactaataaaaacgccaagactaaagaagac
catgttgacattgatctctctcagagttaccgcaagcagatggagcaaaacagacgttta
cacatgcagcagcagcaacagcgcgagtctgacaaactgaaaaaagcagaaagtctgcta
aaaaacgaaactgaagacctggaacatcgtagccttgtgcatgaagttggtaaaccacct
gaggatgtcacagataattttccgtctcacaagctgtctgaccagtttgaagccgagccc
gggataaagagagagcgtttctataggagacaaaaaagtgaagaccctgactggagtagt
accccttctccaggacaccaagttttctctcagcatgctgatgaggacttcatggatgcc
tctctgaaggagttaagtcgaaacaatcagaagattcacccagaacttgaacttttggtc
aaaaggacccacaacacacaggtgaacaagacaaacacccccattaatattggggaagaa
gatcaacaaaagaggtgggagagcagaggtaagcaggacctgctacccaacctgaacttt
tctagaggcttgggcaaaaaccttcacaaccgcaagccctcagaatacggcctctggcat
gatttggagcctggggaagtgagatcagactctgaagaggatagagagaacaaacccctc
tctcctgctccctccacctctatgcctttttctgagaggccgagacctgatcggttttca
gacccaaagctggctcaccttgaaagaaacaaattctattcgttcgcacttgaccagact
atcacccccgatactaaagctctactggaacgagcaaagtctttgtcctcttctcgtgag
gataactggtcatttttagattacgattcccactttgtgaatttccgaagccagaaagac
acagagaaagtagaatcagcaccaagacctactccttcctggtacatgaaaaagaaaaag
atacgaagtggatccgaggacaaactggatgacaggaaagaagagcccaagccggaggaa
caggaacgcagagagcttttcgcttcacgtttccttcatagcgctgtgtttgagctggac
tctagacgacttcaacaccttgagcgcaaatacgaagagttggagcacatgctgaaccaa
caagctagtcagcaaggagcagagggagaacttgagaccggcccagttgtcctctttcac
agccgttttctggagctcacacaactacaacaacaaaaaaacaagagtcagcagctgcag
gaggataaaggaaacacagtttgtacaagtgaaaataaagaggaaaaaccatctgagcag
gaacaacaagatttacggtctaatgacatgccagaatctagtgtggcagctgaaatcaaa
cccatcagtcctgttgaacaagttgctcctgaaccaaaactgactcccaatcttgttatt
cagtctgcaagcaaagacacaccttcttcacaccagaaatgtgtgctaccaactccaccc
gctgatgtgtgcccacctatgtcttttataaaagaggagacaaaggaagaagtaaaagaa
agtgaagatgttgtaccaatgcactgttcaccaactgagaccttaaaatctgaacctgca
cctgaaactgttcctgaaactaacatttctgaggagaacctggaatttcttgaagaggat
gcaaagcctttaattgacgaacaaacaaatgaccctggttctcatgaagagttggttagc
agatcagagccagagccaagtcctgagatgtcacaaccagaagtgcctacagctagtagt
ccagtacaactcagtgttgctgaagaagcagatttaatcaaagaagatcctctttccaca
tgtcaaaaaacagtagagtcagaaggagagaagaaacttgaagaagtgagtaaagaagag
atttctgttgatagtgatgcaattgaagagccagtctcctttcaaaaagaaaataaaaca
aaagaaattaaaactaaaaaaggcaggcaatctcctgctcaagttcctttaacatctgtc
tctgagaaacaagctacacgcaagagtgagcgcatcgacaaagataagctgaagcgtggc
tcatccccaagagctgaaacaaagtcttcagccaagtctccaactcccggatcagatcat
gatcattcggagcagagcatcccgataagtagagcaagaactcgaagaaatgtaaaatct
gtttatgcaaccccagtggaagacgatgcaccaactcgtggcaaggaaactgagtcacct
cgctctgcacgaaagcggggtacagagaaagaagctctgcagcacagcaccgagtcggaa
ccaccgactccagcgccagcaaaacaacgtgggcgtcctcccaaaaaccgcaaaccgatt
gaagaggtttcagctgcaaaaacagagaaaataaaaatggataaggatgcagattcaaat
gagtcggagaacggcgaacgggtttcaagagttgctaaggggaaaatgtccccttatctc
acaaagggttcctcaaatccaataccctcagtcccaggctctaagaaaggggacaaaact
gaaacagctgatgagaatcaagtaatacatttcacagaagcagaagatttgtcttcacaa
cattcgtcatcttcaggcaaagactcttctgtaaaatcagatgtaaagaaaggctcagaa
ctggataaagacgttcatgaaaaattatgtgaggagaaatcgaatggaaaagaaacagat
tcactgctgggtgaggagaaacctgccccagagaaagagaagatcataaaaggaaaagtc
aaggctgcaaagcctcatgtttttagggacctccaagtcatactggatgtcaaagaggtc
aaagatcacgtttccaggtgcactactgccaacaaagagtgccctaatgaagaaaaagag
aagaaggatgtagactcctcaaagagctcttccctacaggagcgtgaattggagcaggca
gttgagaacatcgccaaacttaccgaaccggctttgccaacagaactaccaactcctgtc
cctcctgcagaggtaaaaagtgatcctgaggaggaaaagccttgtaatcctgccagtgag
acagagctgatggctgccattgactcaataacaggcgaagatgtaagtgtacctctcacc
ccagccgctccagttagcacagaagtttgttcagaacctgaggtccaggagtttgtccca
ccggtcaaggttgaagaacctgaaaccgcactgcaagaggaagccgtcttctcaaatact
cccaaaaagagttacaagggaaggcccaaaacacctaaacgccctaaagccccaaagcat
gcacgaaaagatgtgaaagaagaattaagtgaggagttgacggtgcctttagctgagagt
acagtttctgatgtaaagattgtggctgagaagcctccatctgctgcagctgctgcagtt
atcactcctacgacctggaaatcggaagctgaacttccagctgtgaaggcagcagaatcg
gagttgccgtcgcctgttgaagagcaaacacaagctgtgaaacctacacacccccaggct
aagagccccatataccctcaacagttaccagctgagtgtgtttctctctctctggcctcc
aacaggcccaacatcagatccattcaaaccagccgagcgcctgtttctccacccgactgg
cgacaccagtctaaggatccatgtgttacctctgcacatataatgtcagtagcagccaag
gaaggccagctgaccacttctgactccaacagcaaagagctagatcaaggcacaagtgac
ttgaggcagattctcatgaaacctaaaacaattactctcccaggaggaggaagttctgct
ccaaccaatctgcccagcctccgagatcagaatccatctgaaagcaatcctgccatcaca
gctgctcttcacaacagatccccgctccctgagagtaaaacgccgactcattcagttcca
cctattgtccgaacaccctccacgttacctggagaaactaaatctgtgatctccgtaatt
gcatctacggcaacttctgttattagtcgcgtttgcaacccccctgagactgaggaaaaa
cctaatctaattattggaaatccctccatggatgtgactctgcccaaaacggcctacagg
cccagcaaagacgatggcggaccttaccacggtgccacgttcagttctgggtcttgctct
ggtctgcgagtaaacacgtctgaaggagtggtggtgctaagccactcgggccagaaaaca
gaaggacccctgaggatcagtgccaagattagtcaaatcccacaagcaacagccggtgac
attgaatctcagcaattggtgccgattccccagattaaacaagatgtttacagccattct
cagtcgggacatcagaaggggtcttcacaaactgatcatgggcatcctggtaaactccaa
tcagctctgtcttcaattaagcaggaaagcggcagctgcagtttagaaaagatggattca
gcttaccaggcggggccccaaggagtcgtgaagcgtctcccgcaaggtaaccagcaggta
atgggttaccaccaagactacctgcaattaaaacaccaaaagaagatggaaaatgttgat
cctcatggtacagatggagctaagccatcttggacctccactgtaagccctgctataagc
ccacatttaccatctccccctgggaaccatgtgggcttcgtcacatccactggtgacaga
ggtccgtcgcatcttggtagcatcaaacaggaaccacgatccccgagaaagtcaggacat
tctcatcctcctttcaccaaggtgtcttcacctcttggctcctcctcacccaaggggatc
cctgtaatgatatcctctgctctcaaccctatgcagcagtatatcactggtgtccaccac
ccagagcaatctgtcatcatgccacctcacaatgtgcctggaggtgtgggacgaatgtct
cctcactgcgtctcccagtccattacagtgggtcatctggttcagggggaggtccgggtc
aacacaccacctctgtctgtgatgaactacgtccatagcgagaagcttgcctctccgtgg
tctggttccctgcagccgcggtcgtcctctccccaggctgtcagcagggacaaagtcctc
aaggtcaaccacggttctttgcggggccatgagggcgaacaggacgaatccagacacttc
caccaagctgggagaccatccgccaccctgccgacagatactcggggagctttgaggact
aacatggaaacgtttatcgctaagagagatatgcgagtgcacctgcaccagcagggggag
cgtctgacactggacccccattctggacacattcaagaaactctgccgccttctttatct
ccgagagctcacatgttgcccaaaggcgtgtctgagaaggacataaagtcgctggaagca
aagaggccgcactctcctgtaattcaaaaggatggaataatggcgatccggcagtctggc
ggtgctattgcgtcacctcaacgggtttccctgatgccaccgggacccagcgggtcgttc
tccgagtactcaggaatgtacccaaaccgcatgcattctcagatcccggatgcccctgtt
gggcacaaccagccgccgttgaacgtcactccgtctatgggtgcagaactccaggctaaa
ccagatggaaagatgacccagactgttaatatggtgcagttgcttacgaagtaccctata
gtgtggcagggccttctagcactgaagaacgacacagctgctgtccagctgcatttcgtc
tgtggaaacaaagctctggctcatcgatcgctgcctttgcaagaaggaggcgctctgctc
aggattgttcagaggatgagactggaggcctctcagttggagagtgtagccagaagaatg
acgggtgacagtgatttctgtcttctcctcgctttgccttgtggacgagatcaagacgat
gtcataaaccaaactcaagctcttaaagctgcattcatcaactacctgcaggcaaaactg
gcagctggtatcatcaatatccccaatccaggttccaatcagcccgcctacgtgctccag
attttcccgccctgtgagttttccgagagccacttgtctcagctggcccccgaccttttg
aacaggatctccagcatctcgccacacctcatgatcgtcatcacctctgtgtga
DBGET
integrated database retrieval system
