Xiphophorus couchianus (Monterrey platyfish): 114135509
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Entry
114135509 CDS
T05908
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114135509
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
114135509
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARMC9_ARM
Atx10homo_assoc
HEAT_EZ
HEAT
Symplekin_C
IL4
Motif
Other DBs
NCBI-GeneID:
114135509
NCBI-ProteinID:
XP_027858648
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All DBs
Position
20:5767138..5777605
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AA seq
730 aa
AA seq
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MSSAEPLKSAISIRSSDDTSLALPSANEYHSREQRVKAQVQSLRRTKSRHSSSGRSGSTS
LSPTSPEYDSVFLDGAKSQLSSSNGGDFLSNGSSKVFTTNRNMNNQHMISNMKRSTVRKQ
TINHYDSRYGAVGGVASLGLANTSRSEPGLALNSSVPLPSVPMQIQPTVQQRGNRNTYMK
HRSNSNHYIKRTISQTHPLYALNGSGLMHKQSQYGVSQPEMNKSQHTVTDSSSKNQMNSE
VNGNSLSSNITMQEAVQFLSSQDEKYQHCGASYIQHNTFISDKAKEEVFTLNGIPPLVRL
LQSPNSQVKSTASAALRNLTFQNNKNKEEIQRCDGIPEVVAQLKASESAELDKQLTGLLW
NLSSVDNLKSDLLKNALPVLMERVILPYTTGSRDTVSAEVFCHATACLRNLSSAKEASRQ
TMRKCRGLIDGLVAYMKECVANCKTEDETLGHCVSILHNLTFHLEEEFSSLFINMNSLAK
NMISNVSQNNANSVGCFSAPSKPLQTDRPFDYAVIEEPQPNGAGLLIHSKTLKDYLSLLS
LTERQPLQDACWGILHNLTARESAVSYVISQIIVKKLNGMHYISPFLKSDKVNMQKNAMG
LVVNLIKNPNLCSAVGEKTIPNLLSVLSKDTAGANESDDTLALACQAASGLVLNDVEWTK
RHLSEKLIKSLNGISQNIYFSKSSKAASVLLIRMWSNKELQSSLKKLGFSKSMFINDTTM
TVQKSLHIVD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgcggagcctctgaaatcggcgatttccatcaggagctcggacgacacgtct
ctggctctgccgtcggcgaatgagtatcattcccgggagcagcgcgtcaaggcgcaagtg
caatctctgaggaggacgaagtcaaggcactccagcagcggcaggagcggatctacttct
ctttccccaacaagccccgagtacgactctgtgtttttagatggcgcaaagtctcagttg
agttcatctaatggaggcgattttttgagcaatggctcctcaaaagtttttaccacaaac
agaaatatgaataaccaacacatgatcagtaacatgaaaagatccactgtaaggaagcag
actataaatcactatgacagcaggtatggcgctgttggcggtgtagccagtctgggtctt
gctaacaccagtcgcagcgagcccgggctggccttgaacagcagcgtcccactgccgtcc
gtcccaatgcagatacaaccaaccgtacaacagcggggcaacaggaacacctacatgaaa
caccgcagcaacagcaatcactatataaagaggaccatctcccaaacccaccctctgtat
gctttaaatggatcgggtctgatgcacaaacaaagccagtacggagtcagtcaacctgaa
atgaacaagtcgcaacacaccgtcactgattcttcatccaagaatcaaatgaactcagaa
gtaaatggaaacagtttgagttctaacatcactatgcaagaagctgtgcagtttctttcc
agccaagatgagaaataccaacactgtggtgcttcctatattcagcacaacactttcatt
agcgacaaagcaaaagaagaggtttttaccttgaatggtatcccgcccctcgtgcgtctg
ctgcaaagccccaactcacaggtcaaaagcacggcctctgccgccctgcgaaatctgacc
tttcagaacaacaaaaacaaagaagagatccaacgctgcgacggcatacccgaggtggtt
gctcagctcaaagcctcagaatctgcagaactggacaaacagctgacaggtcttttgtgg
aatttgtcgtctgtagacaacctgaagtcagacctgctgaagaatgctctgcctgttcta
atggagcgtgtgattctgccttacacgacaggctctagagatactgtcagtgctgaggtc
ttctgccacgccacagcatgccttcgaaacctcagcagtgcaaaggaggccagcagacag
acgatgaggaaatgtcgaggtttgatcgatggcttagtcgcttacatgaaagaatgtgtg
gcaaactgtaaaacagaagatgagactttaggacactgtgtgagcattctgcacaatctg
acatttcacctggaagaagaattttcaagtctgttcatcaacatgaattctttggcgaag
aatatgatcagtaacgtcagtcaaaataacgccaactctgttggttgcttcagtgcacca
agcaaacccctacaaactgatcgtcccttcgactatgcagtcattgaggaaccgcagcct
aatggagcaggccttttgatccactccaaaacgctgaaggattacttgtctctgcttagc
ttgaccgagcgccagccgctgcaggatgcctgctggggcatactgcacaatctcactgcg
cgtgaaagtgctgtctcttatgtaataagtcagatcattgtgaagaaactgaatggcatg
cattatatcagccccttcttaaagtcagataaagtcaacatgcagaagaacgcaatgggt
ttggtggtaaatttgatcaagaacccaaatctgtgcagtgccgttggtgaaaaaaccatc
ccaaacctactaagtgtcctctcaaaagacacggctggagccaacgagtccgatgacact
cttgctttggcctgccaggctgccagcggcctggttctgaatgacgttgaatggaccaaa
agacatttaagcgaaaaactgattaaatccctgaacggcatcagccaaaacatttatttt
tccaaatcgagcaaagctgcttcagttcttctcatcagaatgtggtctaataaagaactt
cagagctctttgaaaaagcttgggttcagcaagtctatgtttatcaatgacaccaccatg
acagtacaaaaatctcttcacattgtggattaa
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