Xiphophorus couchianus (Monterrey platyfish): 114135598
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Entry
114135598 CDS
T05908
Symbol
iars
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
114135598 (iars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xco01007
]
114135598 (iars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114135598 (iars)
Enzymes [BR:
xco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
114135598 (iars)
Amino acid related enzymes [BR:
xco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
114135598 (iars)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
114135598 (iars)
Prokaryotic type
Other AARSs
114135598 (iars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
UN_NPL4
PriX
Motif
Other DBs
NCBI-GeneID:
114135598
NCBI-ProteinID:
XP_027858821
LinkDB
All DBs
Position
20:11517668..11566236
Genome browser
AA seq
1268 aa
AA seq
DB search
MVEPVPESISFPSEEEKIMQFWQERDCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RSIVMRYSHEWESSVRRMGRWIDFKNDYKTLYPWFMESVWWVFKQLYDKGLVYQGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVSFPLVESENVSLIAWTTTPWTLPSNLALCVNP
EFLYVQVKDNTTDRTYIMMEARLGALFKSESEYTILNKFPGKVLKGKKYKPLFLYFSKCA
EKGAFQVVMDNYVKEEEGTGVVHQAPYFGADDYRVCTEYNIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKFLKEKGRLVNASTFKHNYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLDCNGKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDFEEVVC
VGSMAELEELTGVKVTDLHRENIDSLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENLRFKEDGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEEEIQFLYNENTVKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPAAVEEKDSNSIHYLMLPQVRDNLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALKDIQSLEKYILEELNVRQLTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFKAVTASIKELTSEQLEAFQKTGSIVVDGHELHEEDLRLMYTFDQTSGSAAQ
YEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKAHLVPSDEISVYYRCQPEGE
YLGSVIEAHTDFILATTKAPLLPFPVPKTASVIIEEKTQLKGSDLAFTIVKGSSLSQTPP
NGPACAYVNLRVKVNNTEQEGVVLLENPKGDNRLDLDKLRKVCSSIFGINNTQLRFFSDQ
SELTSRADLQTHSGKTLLVTSGPSSPGAVPTADTLLCPYVNLLLCNAQPAECQAGDVGTL
LLVNPVGQNELDHSGLLSEAAKVFGLRSRRLKLYLDQDFTSELPAESSVKSLHTKTLYVR
VFPTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagttcctgaatccatcagttttccctctgaggaggagaagattatgcag
ttttggcaagaaagggactgtttccaggaatgcctcaaacagtccaagaaccgacccagg
tacaccttttacgatggccccccctttgccacgggtctgccgcattacggtcacatcctg
gctggcaccatcaaggacatagttacccgctttgcccaccagagtggcttccatgtggac
cggcgctttggttgggactgtcacggtctgcctgtggagtatgaaattgataaaactttg
gggatcaaaggacctgaagatgtggccaagatgggcattgctgagtacaacaagcagtgt
cgaagtattgtcatgagatactctcatgaatgggagagctcagtgagaagaatgggccgg
tggatcgacttcaagaatgactacaagactctttacccgtggttcatggagtcagtctgg
tgggtgtttaagcagctctatgataagggcctggtgtatcagggagttaaagtcatgcct
ttctccactgcctgcaacacacccctctccaactttgagtctcatcagaactacaaggat
gtccaggatccctctgtgattgtgagttttcctctggttgagagcgaaaacgtttctttg
atcgcttggacaaccacaccttggaccctgccaagtaacctggcgctctgtgtcaaccca
gagttcttgtatgtccaggtcaaagataataccacagataggacctacatcatgatggaa
gccagactgggagctcttttcaagtctgagagcgaatacacaattttgaacaaatttcca
ggcaaggtcctcaaaggaaaaaagtacaaaccactttttctctacttcagtaagtgtgca
gagaagggagcattccaggtggtgatggataactacgtcaaagaggaagagggcacagga
gttgtccaccaggccccttactttggagctgatgattacagggtgtgcactgaatacaac
atcatccagcgggaccaggctcctatctgccctgtggatgcctcgggctgcttcacttca
gaggtcactgactttgcaggacagtatgtcaaagatgctgacaagaacatcattaaattt
ctgaaggaaaagggacgcctggtcaatgccagcacattcaaacataactaccctttctgc
tggaggtctgacacccccctgatctacaaagctgtccccagctggtttgtgcgagtggag
cacatggtggacaaactgctggactgcaacgggaaatgctactgggtcccagagtttgtg
cgtgagaagcgttttgggaactggctcagagatgcacgcgactgggcaatttcgagaaac
cgctactggggcacgccgatccctctgtgggtcagcgatgacttcgaggaggtggtctgt
gtagggtccatggctgaactggaggagctgactggagtcaaagttacagatttgcatcgg
gaaaacattgacagcctgacaatcccgtcacggtgcggtaaaggcgtcctgcgaagggtt
acagaggtgtttgactgctggtttgagagtggcagcatgccgtatgcccaggttcactac
ccgttcgagaacaggaaggagtttgaggacacctttccagcagacttcatcgccgagggc
attgaccagaccagaggatggttctacaccctactggtgctctccacagcgctgtttggg
aaaccacccttcaagaacgtcattgttaatgggctcgtactcgctagcgatgggcagaag
atgagcaagcgcaagaagaactacccagatccaggactgattgtgcaaaactatggagcc
gatgccctcaggctgtacctcatcaactcccctgtggtgagagcggagaacctgcgattc
aaagaggacggcgtgcgagacgtgctgaaggatgtcttcttgccgtggtacaacgcctat
cgcttcctggtgcaaaatgtacaaagattacaaaaggaggaggagattcagttcctgtac
aatgaaaacacagtgaagcagagtgacaacatcatggacaagtggatccagtcgttcaca
cagtctctcatccaattctttaaagctgagatggacgcgtaccgcttgtacacggtggtc
cctcgcctggtcaagtttgtggacatgctcaccaactggtacgtcaggactaacaggcgc
cgcctgaagggcgagagtggcactgaggactgcctgtgggcgctggaaacactcttcagt
gttctgttctccatgtgcaggttgatggcccccttcacacccttcatcacagaaatgatg
taccaaaatctgcgtcacctcattgaccctgccgctgttgaagaaaaggactcaaacagc
atccactatctcatgctgccacaagtcagggataatttgattgacaagcgcattgagagc
gccgtctctcagatgcagtctgtgattgagctgggaagagtgattagagatagaaagacc
cttcctgtcaagtacccattgaaggaggtggtagttatccaccaggacccagaggctcta
aaagacatccagtctttggagaaatacatcctcgaagaacttaatgtgcgacagttgaca
ctttcaacagacaagaacaagtatgggatccgtctgcgagccgagcccgaccacatggtg
ttgggcaagagattaaagggggccttcaaagctgtgactgcttctatcaaggagctcacc
agcgaacagctagaggccttccagaaaacagggtccattgtggtggatggccatgagctc
catgaggaagacctgcggctgatgtacacttttgatcagacttctggctctgctgcacag
tatgaagctcactctgatgctcaggtgcttgtgctgttggacgtgaccccagaccagtcc
atggtggacgagggcgttgccagagaggtcatcaaccgtattcagaagctacgcaaaaag
gcacatttggtgccatcagatgagatatcggtgtactaccgctgccagccagagggggag
tacttgggatctgtgattgaggctcacactgacttcattctggctaccaccaaggctccg
ctcctgcccttccctgtcccaaaaactgccagtgtcataattgaggagaagactcagctg
aagggctcagacttggcgttcacaatagtaaaaggatcttcactctcgcaaacgccacca
aacggaccagcttgtgcgtacgttaacctcagagtgaaagtcaacaacacagaacaagag
ggcgtagtgttgctggagaatcccaaaggggataacagactagacttggacaaactgagg
aaagtgtgcagcagcatctttggaatcaataacacccagctcagattcttcagcgatcaa
agcgaattgaccagcagagcggacctccagacccacagtggcaaaactttgttagtgact
tcaggcccctcctctcccggcgccgtgcccaccgccgacaccctgctgtgtccctatgta
aacctgttactgtgcaacgcacagccggctgagtgccaggctggagatgttggcaccctc
ttgctggtgaacccagttggtcagaatgagctcgaccactctggtctgctctctgaggct
gccaaggttttcggcctccgcagcagacgcctcaaactctacctggaccaggattttacc
agtgaactgccagctgaatcatcggtaaaatctctccacaccaaaactctgtatgtgaga
gtttttccaaccaccgctgaagcttag
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