Xiphophorus couchianus (Monterrey platyfish): 114137543
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Entry
114137543 CDS
T05908
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00900
Terpenoid backbone biosynthesis
xco01100
Metabolic pathways
Module
xco_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
114137543 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xco01006
]
114137543 (ggps1)
Enzymes [BR:
xco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
114137543 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
114137543 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
114137543 (ggps1)
Prenyltransferases [BR:
xco01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
114137543 (ggps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
ELF3_helical
Motif
Other DBs
NCBI-GeneID:
114137543
NCBI-ProteinID:
XP_027861995
LinkDB
All DBs
Position
22:17995276..18008739
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AA seq
315 aa
AA seq
DB search
MDGTSQPASDRILLEPYKYLLQLPGKQVRTKLAQAFNHWLNVPEDKLQVIIEVTEMLHNA
SLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLILEHPEAVRVFTRQL
LELHRGQGLDIHWRDTYTCPTEEEYRNMVLQKTGGLFGLAVGLMQLFSDWKQDLKPLLDT
LGLFFQIRDDYANLSSDEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTE
NMDIKKYCVDYLEKVGSFAYTRQTLQDLEAEAYRLITELGGNPQLESLVKHLSRMHNKAE
ASAESKRETHLSQNY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatggtacctctcaacccgcctcggaccgaattctactagaaccgtacaagtacttg
ttgcagctgccaggaaaacaagtgaggacaaaacttgcccaagcatttaaccactggctc
aatgtaccagaagacaaactgcaggtgatcattgaggtgacggagatgctgcacaacgcc
agcttgctgatagacgacatcgaggacaactccaagttgcgtcgaggcttcccggtggct
cacagcatctacggcattccctcagtgatcaactcggccaactacgtgtacttcctgggg
ctggagaaggttctgatcctagagcacccagaagctgtacgagtgtttacccgccagctg
ctggagctgcaccgcggccagggcctggacatccactggagggacacctacacctgtccc
acggaggaagagtatcgcaacatggtgctgcagaagaccgggggcctcttcggtttggct
gtggggctcatgcagctcttttcagactggaagcaggacctcaagcccctcctggacact
ctagggctcttcttccagatccgggacgactacgccaacctgagctccgatgagtacagc
gagaacaaaagcttctgcgaggacctgacagaggggaagttctcgtttcccacaatccac
gccatatggtcacgtcccgagagcacccaggtgcagaacatcctgcggcagcgcacggag
aacatggacatcaagaagtactgcgtggactacttggagaaggtgggatcttttgcctac
acccgtcagaccctgcaggatctggaggcggaggcttaccgcctcatcacggagttagga
gggaaccctcagctggagagcctggtcaaacatctcagccgcatgcataataaagcagag
gcttcagcagagtccaagagagagacgcacttgagccaaaactactga
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