Xiphophorus couchianus (Monterrey platyfish): 114137718
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Entry
114137718 CDS
T05908
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114137718 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114137718 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
114137718 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_2
Plasmod_Pvs28
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
114137718
NCBI-ProteinID:
XP_027862310
LinkDB
All DBs
Position
22:complement(992267..1064914)
Genome browser
AA seq
1468 aa
AA seq
DB search
MVWVIWGLLLSVGLFLSPVCESVERQPSRSGFRRLYVLQPGPGSGPGSAPGEGGVRLSSI
STRHGPSGQPVVYNVGLTGSFGSQVRNRRMGNPAAPAPQLQDQNQQNQLMKLSGVNVCGG
QCCHGWSKTQGSQRCTKPNCFPPCQNGGMCLRPQLCVCKLGSKGKACEQTPVPAHSSPVV
PGSEPTNGHTNGHTNGNSVVPQRPIPQQVPPNSYTSTNNLAQMKLTVKAAPQFVRPQYIQ
QHIQQQIRPVPIHSGLNQQYVIKPKYYHTHTTHTQMHVQPQPERPIPLTVGHNSIHAALG
NQTGRIKVVFTPTICKVTCVGSRCHNSCERGNTTTIISENGHATDTLTAPNFRVVVCHLP
CINGGKCSARDKCQCPPNFAGKFCQMPVQNGHQQHQQSSVTYGQAQIVSTHTLPLTYSHG
QTPVFNPGIVNIHIKHPPEASVQVHQVSQLDNYSNNGNQQQGSHSGSSSSSSYSYHHSES
SQKVQHHGYNMVHPNQHGYKVPHYQPVASKNTLGRCFQETAAGQCGKALPGLTKLDQCCA
TIGTSWGFHKCQKCPNKPSIPLIDCPPGYKRINTSHCQDVDECQLRVVCPNGGCLNTVGS
YMCTCKPGYAPDATLTSCIPNTPAVQEEKGACFRLVSSARQCLHPVSAQLSKQLCCCSVG
KAWGPRCDKCPPPGTALFKEICPGGMGYTVLPNPPVNKPVTVFQEPDDLLPPQPLPTPEK
PVEAFGTQEEILPEVVEKTSSPAPVEILPSNAGQDIAPTQLAEVDECEIPYICGQGVCYN
TAESYICHCDEGFHLDDSQSTCIDIDECENRTMCPSGICYNNPGGYSCGTCPLGFVGQGG
HCIDIDECHDERVCVRGHCLNTEGSFLCQCGPGFRVSSAGDQCDDADECQEEVSPCVSVG
KCVNNMGSYTCTCSEGFRQINDTSCIDVDECVEEAELCSPHGTCLNTEGSYLCVCDSGFT
ASLHAPSCDDIDECGLNETRCGPHGYCENRLGSFQCLCDQGYQESQDGHACEDVNECELL
SSVCGEAECVNVDGSFLCVCPNGLDYNVMIAKCEPTQTAPSVERKDCYYHLSAENLCENV
LSSHITLQECCCTLGAGWGDNCEVYPCPVNGTDQFTQMCPSGRGFVPNEDLLYGVTFSNS
YKDADECKLFDKEVCKGGYCGNTEGSYECYCTSGHYYDPVQLKCTDVNECLDKSVCDGGE
CLNTDGSFNCFCRPPMVLSPKSHRCVVLPQLAEQQEMEQLDYQICWQTVTETETCTRPLG
PNRKMTFTECCCRFGEAWGMDCALCPPRHSNDYASMCNIRLAGRRQPYGHDALVAGPVYE
YEESPEYYTSPDEQHVRKFYENEEHRHSAFEGLRAEECGILNGCENGRCVRVQEGYTCDC
FAGFTLDLSRMACVDVNECSELNSRMSLCRNGKCINTVGSYRCECLPGYRVSDKPNYCVK
TDKQQTSTHTQREEAETSRATKTTRTSS
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggtttgggttatatggggcctcctcctctccgtcggcttgttcctctcccctgtctgc
gagtcggtggagcggcagccgagtcgcagcggcttcaggaggctgtacgtgctgcagccc
gggccgggctcgggccccggttcggctcctggggaaggcggggtgcgcctcagctccatc
tctacacgccacggcccgtccggacagcccgtggtttataatgtgggtctcacaggaagc
tttggcagccaggttcggaaccgcaggatggggaatccagcggctccagccccgcagcta
caggaccagaaccagcagaaccagctgatgaagctgtccggggtgaatgtctgtggaggg
cagtgctgccacggctggagtaaaactcagggatcgcagcggtgcaccaaacccaactgc
ttccctccgtgccagaacggaggaatgtgcctcaggccccagctctgcgtctgcaaactg
ggctccaaggggaaagcctgtgagcagaccccggtgccggctcactccagcccagtggtg
cctgggagcgaacccactaatggtcacactaacggtcacacgaatggaaacagtgtggtg
ccacagaggcccatacctcagcaagtgccacctaacagctacacctccactaataacttg
gcccagatgaagttaactgtcaaggcggccccccagtttgtcagaccccaatacatccag
caacatatccagcagcaaatccggcctgtgccgatccactctggactgaaccagcaatac
gtcatcaagcccaagtactaccacacacacaccacacacacacagatgcatgttcagccc
caacctgagcgccccatccctctgacggtgggacacaactccatccatgcagcgctgggg
aaccaaacaggaaggatcaaggtggtcttcacacccaccatctgcaaagtgacctgcgta
ggaagcagatgtcacaacagctgtgagaggggaaacaccaccaccatcatcagtgagaac
ggccacgccacagacacgctgacagcgccaaacttcagagtagtggtgtgtcacctgccg
tgcattaatggtggtaaatgtagcgccagggacaagtgccagtgtcccccgaactttgct
ggcaagttttgccaaatgcccgttcaaaatggacaccagcagcaccagcagtcgtctgtg
acctatggccaggctcagattgtctctacacataccctgcctcttacatacagccatgga
cagacgcctgtgttcaacccaggcattgttaacatccacatcaaacatcccccagaagcc
tcagttcaggttcaccaagtgtcccagttggacaattactccaacaatgggaaccaacaa
caagggtcccactcaggctcctcttcatccagcagctacagctaccaccactctgaaagc
agccagaaggttcagcatcacggctacaacatggttcatcccaaccaacatggctacaag
gttccccattaccagcccgtcgcctccaagaacaccctgggtcgctgcttccaggaaaca
gcagccggtcagtgtggaaaagctttaccaggtctgaccaagctggatcaatgctgtgca
acaattgggacctcctggggcttccacaaatgccagaagtgtccaaataaaccctctatc
cctctgatagactgtcctccgggatataagaggatcaacacttctcactgccaagatgtg
gatgaatgccagctgcgggtcgtttgtcctaacggaggctgtctgaacactgtgggcagt
tacatgtgtacatgtaaacctggctatgcccccgacgccactctcaccagctgcatcccc
aacacacctgccgtccaggaagaaaagggcgcttgcttccgcttggtcagctcagcgagg
cagtgcttacacccagtgtctgcccagctaagcaagcagctttgctgctgcagtgtgggc
aaagcctggggccctcgttgtgacaaatgcccccctcctggaacagccttgtttaaagaa
atctgtcccggtggaatgggctacaccgttttaccaaaccctcctgtaaacaagccagtc
accgttttccaggaaccagatgacctattacctccgcaacccctgccaacgccagagaaa
ccagtggaggcctttgggacacaagaagagattcttccagaagttgttgagaagacgtct
tctcctgctccggtggagattctcccatccaatgcgggtcaggacatcgcacccactcag
ttagctgaggtggacgagtgcgagatcccttacatatgcgggcagggggtttgttacaac
acagctgagagctacatctgccactgtgatgagggattccacctggatgacagccaaagc
acctgcatagacattgatgagtgtgaaaacaggacaatgtgtccttcaggtatttgctac
aataatcctggaggttacagctgtggtacctgtcctctcggctttgtagggcaaggaggt
cactgcattgatatagacgagtgccatgacgagcgagtgtgtgtcagaggccactgcctg
aacactgaaggctcgttcctgtgtcaatgtgggcccgggttcagagtgtcatcagctggg
gaccagtgcgatgatgcggatgagtgtcaggaggaggtttctccgtgtgtgtctgtggga
aagtgtgtcaacaacatgggctcctacacctgcacctgctccgagggcttcaggcagatc
aatgacaccagctgtatagatgtggatgagtgtgtggaggaggctgagctctgctcccct
catggtacgtgtctcaacaccgaaggctcctatctgtgtgtgtgtgacagtgggttcacc
gccagcctccatgcgccctcttgtgatgacattgatgagtgcgggctcaacgagacgcgc
tgcgggccccacggctactgtgagaaccggctgggctccttccagtgcctctgtgaccaa
ggctaccaggagtcccaggacggccacgcctgcgaggatgtgaatgagtgtgagctgctg
agcagtgtgtgtggagaggccgagtgtgtgaacgtggatggctccttcctctgtgtgtgt
cccaacggcctggactacaacgtcatgattgccaagtgtgagcccactcaaacagcgcct
tcagtggaaagaaaggattgctactatcatctcagtgccgagaacctctgtgagaatgtg
ctgagcagccacatcacgctgcaggagtgctgctgcactcttggcgctggctggggggac
aactgtgaggtgtacccttgtcctgttaatggcacagaccagttcacccagatgtgtcct
tctggaagaggttttgttcccaacgaagacctgctgtatggagtaacgttctcaaacagt
tacaaagacgcagatgaatgcaaactgtttgataaggaggtgtgtaaaggcggctactgt
gggaacacagagggaagctatgagtgttactgcaccagcggacactactacgacccagtc
cagctgaagtgcacagatgtcaatgagtgtttggataagtccgtttgtgacggaggagag
tgtctgaacacagacggctccttcaactgcttctgtagaccccccatggtgctgagcccc
aaaagtcaccgctgtgttgtgcttccccagctggctgagcaacaagaaatggagcagttg
gactatcagatctgctggcagacagtcacagaaaccgagacatgcacgcggcccctgggg
cccaacaggaagatgaccttcaccgagtgctgctgtcgcttcggagaggcctgggggatg
gactgcgccttgtgtcccccccgacactcaaacgactatgcatccatgtgcaacattcgt
ctggctgggaggcgacagccttacggccacgacgccctggttgccggtccggtttatgaa
tatgaagagagcccagagtactacacatcacccgatgagcagcatgtccgcaagttttac
gaaaacgaagagcatcgccacagcgccttcgagggcttgcgagccgaggagtgcgggatc
ctgaacggctgcgagaacggccgctgcgtccgggttcaggagggctacacctgcgactgc
tttgcgggattcaccctggacctgtcccgcatggcctgcgtcgatgtgaacgagtgctcg
gagctgaacagccggatgtcgctgtgcaggaacggaaagtgcatcaacacggtgggctcc
taccgctgcgagtgcctgccgggctacagggtctccgacaaacccaactactgcgtgaag
acggacaagcagcaaacatccacacacactcagcgggaggaggcagagaccagcagggcc
acaaaaaccacacgcacaagctcataa
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