KEGG   Xiphophorus couchianus (Monterrey platyfish): 114138313
Entry
114138313         CDS       T05908                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114138313 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xco03041]
    114138313 (smndc1)
Spliceosome [BR:xco03041]
 Complex A
  U2 snRNP components
   U2 related factors
    114138313 (smndc1)
 Complex B
    114138313 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    114138313 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR SH3_AtC3H22 DUF2730
Other DBs
NCBI-GeneID: 114138313
NCBI-ProteinID: XP_027863313
LinkDB
Position
22:8834427..8838382
AA seq 238 aa
MSEDLVKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLTSQPIDGASS
TSGSESVPVKKSWKVGERCLATWSQDGQVYEAEIEELDRENGTAAVTFTEYGNAEVIPLQ
NLKVVEEGKRNEDDGGLKSKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREEQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaagatttggtgaaacagttgagcagctacaaagctcagctacagcaagtagaa
gttgccttatcaaccgatccagataatgaagacctcctaaaacttcagaaggacttgcag
gaagtcatcgatctgactaaagatctcctgacttcgcaacccattgatggggcttccagc
accagcggctcagagtcagtgccagtgaagaaaagctggaaagtgggtgaacgatgtttg
gcaacgtggagccaggatggccaggtgtatgaagctgagattgaggagttagaccgagag
aatggcactgcggccgttacgttcacagagtacgggaatgctgaagtgattcctctgcag
aacctcaaagtcgtggaggaagggaaacgaaatgaggatgacggaggtttaaagtcaaag
tcaagaaaagagcaaatagcggagcagcgagagtataagaagaagaaagctcagaaaaag
gtacagaggatgaaggagctggagcaagagagggaggagcagaagtctaagtggcaacag
ttcaacaacaaagcttactcaaagaacaagaaaggacaggtaaagagaagcatatttgca
tcgccagaaagtgtaaatggaaaggtgggagtgggaacatgtggcattgcagacaaacct
atgacccagtataatgacacatccaaatacaatgtcagacatctgatgccacaatga

DBGET integrated database retrieval system