Xiphophorus couchianus (Monterrey platyfish): 114138921
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Entry
114138921 CDS
T05908
Symbol
nectin2
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03266
Virion - Herpesvirus
xco04514
Cell adhesion molecule (CAM) interaction
xco04517
IgSF CAM signaling
xco04520
Adherens junction
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
114138921 (nectin2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114138921 (nectin2)
04517 IgSF CAM signaling
114138921 (nectin2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114138921 (nectin2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114138921 (nectin2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114138921 (nectin2)
04090 CD molecules [BR:
xco04090
]
114138921 (nectin2)
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Nectin family
114138921 (nectin2)
CD molecules [BR:
xco04090
]
Proteins
114138921 (nectin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
ig
Ig_3
I-set
Ig_2
Ig_PVRIG
TM_ErbB1
C2-set_3
ChitinaseA_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
114138921
NCBI-ProteinID:
XP_027864218
LinkDB
All DBs
Position
3:complement(11904881..12022749)
Genome browser
AA seq
527 aa
AA seq
DB search
MARHDARNVPAKMIGLLFFAASILPRHGTSGQRVKVEPELASYPGQTVNLRCAFPDPTGI
QLTMVTWIYEPKDGERMNIAVFHPNFGPNYPESQMKGRVTFKPSPPELSSPSIEISNVRM
TDEGRYVCEYATYPDGNEQGITQLVMLAKPLNSATAVTVNAGTQPVVVARCESKDGRPAA
KIQWLTTAKGNWTETSQTGTDNTVTVTSEYRLAPTAMDNAKDLTCLVTHRTQLKDESLPL
KLAIQYPPVVEIEGYDNNWYVGRTNVGLLCKANANPIPLSVDWKTMTGEMPDTVQIKENE
LKVLKVDSSVNTTFVCEVKNSIGATREQVTINVREPSKTESNAGVVAGAVIGSLLALLLV
AALVTVLVTRSRRQQQGYRANGGSDMKTRIFGGGKKASKNGTSGGTGSGGVAGGNNNGPV
YIDRSPNQGLGEKNNHHQPFTVGARPEVVTGTPTAQDILLSNELDEAERRKFDEMEEDER
YDHFAGGGSILQLRPPPNPDDIIGDYMDDDMESQRDGSVISRTAVYV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcatgacgcccgaaatgtgcccgcaaaaatgatcgggctgctcttctttgcg
gcgtcgatactcccccgacacgggacatcgggtcagcgggtgaaggtggaaccagaacta
gcttcatatcccggccagacggtcaacctacgctgcgccttcccggacccgacagggatt
cagctaacaatggtcacttggatatacgagccaaaggatggagagaggatgaacatagct
gtgttccaccctaactttggccccaactaccctgaatcccagatgaagggcagagtcacc
ttcaaacccagtccaccagagctgtccagcccttccatcgagatcagtaacgtcaggatg
acagacgagggtcggtacgtctgcgaatacgcaacgtatcctgacggcaacgagcagggc
atcactcagctggtcatgttggccaagcccttgaactccgccaccgccgtaacggtgaac
gccggtactcagccggtcgtggtggcccgctgcgagtccaaagatggccgcccggcagca
aagatccaatggttgaccacagccaaaggcaactggacagaaacatctcagacgggcacc
gacaacacggtgacggtgacgagcgagtaccgcctggcgccgacggccatggacaacgcg
aaggacctcacctgtctggtgacacacaggacccagctcaaagacgagagcctcccactg
aagctagccattcagtacccccctgtggttgaaattgagggatatgacaacaattggtac
gtgggccgtacgaacgtggggctcctctgcaaggctaacgcaaaccccattcctctctct
gtggactggaaaacaatgacaggagagatgccagataccgtgcagatcaaagaaaatgag
ctcaaggtgttgaaagtggacagttctgtcaacaccaccttcgtgtgcgaggtcaagaac
agcatcggggccaccagggaacaggtcacaatcaacgtcagagagccttcaaagaccgaa
tccaatgctggtgttgtggcaggggcggttataggctccctgctggccctccttttggtc
gccgccctcgttaccgtgctcgtcacccgtagccgtaggcagcagcagggttaccgggcc
aacggtggcagcgacatgaagacacgcatattcggcggcggcaagaaggcgagcaaaaac
ggaacaagcggaggaacgggaagcggcggcgttgcgggtggtaataacaacggacccgtc
tacatcgatcgctcacccaaccagggtctgggagagaaaaacaaccaccaccagccgttc
accgtgggcgcccggcctgaggtcgtcaccggcacacccaccgcccaggacatcctgctg
agcaacgaattagacgaagcagagaggaggaagtttgacgagatggaggaggacgagaga
tacgaccacttcgctggaggaggctcgattctgcaactgcgcccccctcccaacccggac
gatataattggagattacatggacgatgacatggagtcccagcgggatggctcggtcatc
tcccggactgcagtttacgtatag
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