Xiphophorus couchianus (Monterrey platyfish): 114139259
Help
Entry
114139259 CDS
T05908
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114139259
04020 Calcium signaling pathway
114139259
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114139259
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xco01001
]
114139259
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
114139259
Protein kinases [BR:
xco01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
114139259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
ig
Ig_VEGFR-1-like_5th
Ig_2
V-set
VEGFR-2_TMD
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
114139259
NCBI-ProteinID:
XP_027864871
LinkDB
All DBs
Position
23:complement(6753493..6810025)
Genome browser
AA seq
1300 aa
AA seq
DB search
MISSSCFKLLAVIFCCSSLTAGHVDRDPKIRPSDNPLVRHKGNSLNLTCRGHGILQWILA
NRLIQLEEGVNVEKCDSKHYSHCSRLTITHLTANDTGTYTCNYSKSGSAHSTSVYIYVKD
PKQPFVEPHTLTPLILSIYQHDTSLVVPCRTTSPDAVVRLRANPNLSRETDKEKVWDPKV
GFKIPYAYYELLTCSTEVGGIHFHSSYIPRKFSTDVNDLKVTPDRVKVLVGDTLVLNCSG
ETSPNGRIKFTWDFPKLNENRYHTTKVDLTRDRIIKMSKTLVLQNITMEDRGVYLCKAAT
DATIYYNASARVTVYEHPFLNISHKHSNSGVVIVREDTKKVVLEPKVKALPLPDVISWYK
DGVGIFKNSTCYRMSNYSLSILELKHRHSGVYTVTVGSRDVFRNLSYTLIVEVKPTISEA
ELSIQDVQPYMAGKQHQLTCTAFGVPLPSITWLWQPCHTSTTVNSEQCISDNDPVPVTLN
EQSNNFHNLIASINVETELVQEKNKTVSTLVIREARVSGLYLCQAQNKLGTSNMTLPFYV
NDEPEEVTIEPRAAIEGDDVTLTCRATRYLYTGLRWLDSRNKTITTNVSNLRVDRYSISM
SLNVSNVSESSTAGYQCHAYKLPKPKKSKVKMAALELKERKRPLLSQNLTNQDVNSSSTL
VLGCFASGVPRPLIRWYKNGVEVEESPGVSLEENGTLIIERVKKDDEGRYECVAQNAEGF
AKTSAVVTVLGDESKSNIEVIILVCTGAAATFLWIMLILFIRKLRKQPAHYKMGPSIIID
PDEYPLDEQHDLLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKTVAV
KMLKDGATSNERKALMSELKILIHIGNHLNVVNLLGACTKPGGRLMMIVEFCKYGNLSIY
LRSKRDDFLVYKRQDGKVLSAGSGCELSELMKRRLESVASTGSSASSGFNEDKSYCDSEE
EEEEPEDLYKRVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDF
GLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGASPYP
GVQIDEEFCCRLKDGTRMKAPDYAFSEIYQTMLDCWQGEPQQRPTFTELVERLGDLLQAS
VQQEGKHYIPINTALLAKVGEQIEETEETSTRPVSHRDSGGNWNIKIRPASVKTFDEITM
ENGTNENQEGQSDSGMGLSSDNMKTLMSLAGRPLSIMALAMKAVSKSKESVLNDPEKDKF
LPTVLPLDFSLDDSALDVSLECHSPPPDYNSVVRYSTPPV
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttccagctgcttcaaactgctcgccgtcatcttctgctgctcatcactcaca
gctggacatgtggacagggatcctaaaatccgtccctctgataatccactggttcgtcat
aagggaaactcgttgaacctcacttgcagaggtcatggcatcttacaatggatccttgca
aatcgactgatccaattggaggagggtgttaatgtggaaaagtgtgactccaagcattat
tcgcactgcagcagactcacaattacacacttaacggccaacgacacggggacgtatacc
tgcaattactccaaatctggctcagcgcattccacctcagtttacatctatgtgaaagac
cctaagcagccgtttgttgagcctcacacccttacacctctgattctgagcatttaccaa
catgatacctccctcgtcgtgccatgcaggaccacctcacctgatgctgttgtacgcctg
agagcgaatccaaatctttcaagagaaacggataaagagaaggtgtgggatcccaaagtg
gggttcaagattccttatgcttactatgagctgctcacctgcagcactgaggtcggtggg
attcacttccactcctcctacattccacgtaaattctctacagatgtaaatgatttaaaa
gtcacaccagatcgtgtcaaagtgttggttggcgacacgcttgtcctgaactgcagcggg
gaaaccagcccaaacggaagaataaaattcacctgggattttccgaagcttaatgaaaat
cgataccatacgaccaaagtcgatctgacacgtgatcgtattatcaaaatgagcaagact
ttggtgttgcaaaacataacaatggaagacagaggagtgtatctctgcaaagctgcgact
gatgcaacaatatactacaatgcttcagcaagagtaactgtctatgagcatccattcctc
aacatatctcataagcacagcaatagcggcgtagtgattgtccgagaggatacaaagaag
gttgtgttggagcccaaagtcaaagcgttgccactaccagacgtgatttcatggtacaaa
gacggcgtcggcatttttaagaactcaacctgctacaggatgtccaactacagcttgtcc
atccttgaactgaagcacaggcactctggggtctacaccgtaaccgtgggcagccgggac
gtgttcaggaatctgagctacactctgatcgttgaagttaagccgactatttctgaggcg
gagctctccatccaggacgtgcagccctacatggctggcaagcagcatcagctgacctgc
accgccttcggcgtgccgctacccagcatcacctggctgtggcagccatgtcacaccagc
acaacagtgaacagtgaacaatgcatctccgacaatgacccagtcccggtgacgcttaat
gaacaaagtaataatttccacaacttgatcgccagtataaatgtcgagacagaactggtc
caagaaaaaaacaagactgtgagcaccctggtgatcagagaggctcgcgtgtctggactt
tacctctgccaggcccagaacaaactcggcacttccaacatgactctcccattctacgtt
aatgatgaaccagaggaagtcaccatcgaacctcgagcagccatagagggagacgacgtc
accctgacctgtagggcgacccgttacctctacacaggcctacggtggctggactccagg
aataaaacaatcaccaccaacgtatccaacctccgggtggaccgatactccatttccatg
tctctcaatgtgagcaatgtgtccgaaagcagcaccgcagggtaccagtgccacgcatac
aagctgccgaaaccgaaaaagtccaaagtcaagatggccgccttggagttgaaagagcgg
aagcggccattgctcagccagaatctgaccaatcaggacgtgaacagcagcagcaccctg
gtgttgggttgctttgcttcgggggttcctcgtccgctgatccggtggtacaaaaatggt
gttgaagtggaagagagtccaggggtatcgctggaagaaaacggcaccctcatcatcgaa
agggtgaagaaagacgacgagggccggtacgagtgtgtggcccaaaacgctgagggattc
gccaaaacgagcgccgtcgtcactgtgctgggagatgaaagcaagtcaaacattgaggtc
ataattttggtgtgcaccggagctgctgccacgttcctctggattatgctcatcctgttc
atccgaaagctgaggaagcagccagcacactataagatgggtccgtctatcatcatcgat
cctgatgagtatcctctcgatgagcaacacgatcttcttcagtatgacagcagcaaatgg
gagtttcctcgtgaccgcctgcgtctcggtaaaactctcggccacggagcttttggaaag
gtcgtcgaggcatctgcttttgggattgacaagctctcaacatgcaagactgttgcagta
aaaatgcttaaagatggcgctacatcgaatgagcgtaaagctctgatgtcggagttaaag
atcctgatccacatcggcaaccacctgaatgtggtcaacctgctgggagcctgcaccaag
cctggaggacgtttaatgatgattgtggagttctgcaaatacggcaacttgtccatctac
ctgagaagcaaaagagacgactttcttgtctacaagcgtcaggacggtaaggtgttgtca
gcgggatcgggctgcgagctgagcgagctgatgaagcgccgcctggagagcgtggccagc
accggaagctcggccagctccggctttaacgaagataagagctactgcgactcggaggaa
gaggaagaagaaccggaagatttatacaagagagttctgacgctggaggatctgatctgc
tacagttttcaagttgcaaaaggcatggagttcttggcgtcacgcaagtgcattcatcgg
gatttggctgctagaaacatcttactgtctgagaacaatgtggtgaagatttgtgacttt
gggctggccagagacatttataaggacccggattatgtgcgcaaaggagatgccaggctg
ccgctgaagtggatggctcctgaagccatatttgacaagatctacacaacccagagtgac
gtttggtccttcggtgtcctgatgtgggagatcttctctctaggtgcttctccgtatcct
ggggtccagattgacgaggaattctgctgcaggctgaaagacgggactaggatgaaagcg
ccagattacgctttttctgaaatataccaaaccatgctggactgctggcagggagagcca
cagcagcggccgaccttcactgagctggtggagaggctgggcgatctgctgcaggccagc
gtgcaacaggaggggaaacactacatacccatcaacactgccctgttggcgaaggtggga
gagcagattgaggagacggaggagacgtccacacgacccgtctcccaccgggactcgggg
ggcaactggaacataaagatccgccctgctagcgtgaaaacgtttgatgagatcaccatg
gagaacgggacaaatgaaaaccaagagggtcagtcggacagcgggatgggtctttcgtcc
gacaacatgaagactctgatgtcgttggcaggccgacctctgagcatcatggccttggcg
atgaaggcagtgagtaagagcaaagagtcggtgctgaacgacccggagaaggacaagttc
ctgcccaccgtcctgccgctggacttcagtctggacgactcggctctggacgtcagcctg
gagtgtcacagcccgccgcctgactacaactccgtggtgcgctactccacgcctcccgtg
tag
DBGET
integrated database retrieval system
