Xiphophorus couchianus (Monterrey platyfish): 114139282
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Entry
114139282 CDS
T05908
Symbol
nphs1
Name
(RefSeq) nephrin isoform X1
KO
K24496
nephrin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114139282 (nphs1)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
114139282 (nphs1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
I-set
Ig_2
ig
V-set
C1-set
C2-set_3
fn3
Ig_DSCAM-DSCAML_C
Cohesin
Motif
Other DBs
NCBI-GeneID:
114139282
NCBI-ProteinID:
XP_027864912
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All DBs
Position
3:complement(18453388..18511124)
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AA seq
1242 aa
AA seq
DB search
MEFVSAWIVSAWTLSFLCFFWGTHAQQAFRTEPRNLTVRMGATAVLKCEVLRASGIVQWA
KDGFLLGPQRSLPGFPRYSMIGRRGQYNLRIEDAQLDDDAFFECQAGQSERSEAIVSNPA
FLTVQIPPSKLYFTTDVTAPWVAGKKYMVECVAPDAKPGADITLYKDGVDLTGATSFTTS
GSKDKLLNTHAEVTVTALRSDNGRELTCQANNEAVFQPVVTTVTMNVYYPPEPPYIIGLD
RDVVKAGSLLVLECVSHGGNPLGTLQWTKEGEVLSTTWGEQVVGQKSRNILRLKITPADN
QAELSCESANIVSLSPQSITHKITVFFGPAKLMLSGSLEAIEGQELTLSCHASSSNPPIH
IRWWLGHKELSNTSVTTEEGENGGIATTSNVTHQVSREENGLELTCEAFNNGTHLSKIQA
AKLTVYYPPQKVFIDSPPEDIPLRSGTRALLVCHSTGGNPPAKLTWFKDGKKVSDAQSQT
SSNMVVTRVLNLLLTASDNQAAYRCDATNEAKRTISAHAKLLVQFTAVSMKITAKEEVFY
RGQQMELQCLSGSSNPKSDISWKVGLLRFQGVAEAPKKAEFGGVSVLSRLHLNLTSQHHN
QKVICQAYSPVLEEGTSTFYQLNVLYPPEFSSEQATEVQVVEDDVATIPLMVSANPEVVS
CIWLRRKQMLVKGEDIRHHWSDDHSLEIRNVTRKDGGLYTIKCENGEGVNETTVKLDVYY
APTVKAEKDPVYVNQGGRADLICVADANPIIPEMFSWKWLGEEEVEMGEETNENKSSLLT
IHNVTRAHAGFYQCTASNGIALPGSVEMKLLVQFTPELRKGPQWRKVASRGDGTATAELV
CQAEGIPPVEFTWEKKGMLIDLANPRYEERTARDGSFHTSTLRVVNVSATLDYAVFSCTA
RNSLGEDKLDIQLVSTTHPDPPSSFSLVSVTHDSVTLEWIPGFNGGLQQRYRIRYIWDQS
VSFMYVDVVPPDTTTFTVTGLQSQTTYSFSVNALNSIGESGYADDGAVLTITTEVKKDLE
GDQSDDNTQAPSGLSTHLTVAFTVVFGVLLVLNSLGCFFGRKWKNRRDKTKAERDSVVNG
QKSEEDVSSQSTSNSNKYESREKINTGAQRTLLVDTGSETESKVYESYTAFQEDSHYYYP
TGDYKPYHGPHPEDRHGLGAVPVNFESHLYEDVGDRRVYQDTLASSLPAYRPLFSDHRLI
QQAEDWRPPTDPQGIKRDGQFMNNQQPEQDYDLPFELRGELV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtgtcggcttggatcgtgtctgcttggactctatcatttctgtgtttcttt
tggggcacgcatgcccagcaggccttcaggactgagcccaggaacctcactgtgcgaatg
ggagccacagctgtgctgaagtgtgaggtcctcagggcctcggggattgtgcagtgggcg
aaagacggctttcttttgggacctcagagaagcctgccaggcttcccacgctacagcatg
attggaaggagaggacagtataatctcaggattgaagatgcacaacttgatgatgatgcc
ttctttgaatgccaagccggccaatctgagagaagtgaggctattgtctccaatccagcc
tttctcacagtacaaattcccccatcgaagctgtattttactacggatgtgacagcaccc
tgggtggctggaaagaagtacatggttgagtgcgtggcccctgacgcaaagcctggagct
gatatcactctgtataaagatggagtcgatctgacaggtgcgacgtcttttaccacatct
ggctcaaaggataagcttctgaacacgcacgctgaagtaacggtcactgctctgagatct
gacaatgggagagagttgacatgccaggccaacaatgaagccgttttccagccggtggtg
accacagtgaccatgaatgtgtattatcctcctgagcctccatatattattggtttggac
agagacgtggttaaagcagggagtttgctcgtgttggagtgcgtatcccatggtggaaac
cccctgggcactctccaatggactaaggaaggcgaagttctctcaacaacctggggagag
caagtcgtgggccagaagtccagaaatatcctcagactaaagatcacccctgctgacaac
caggcagagctgagctgtgaaagtgccaatattgtctccctgtctcctcagtccatcacc
cacaaaataacagtgttcttcggtcctgcaaagctgatgctgtcgggttcgctggaggcc
atcgaagggcaggagttgactctgagctgccatgcgtcctcgagtaatccccccatccac
attcgctggtggctggggcacaaggagctcagcaacacctctgtcacaacggaagaggga
gagaacggagggatagcaaccacctccaatgtgacccaccaggtctctcgggaggagaat
ggactggagcttacctgtgaggcctttaataacggcacacatctctccaaaatccaggcc
gctaagctcactgtatactatcctccgcaaaaagtttttattgattcaccgcctgaggac
atccctctgcgctcgggcaccagagccctgcttgtttgccactcgactggagggaatcct
cctgcgaagcttacctggtttaaggatggaaaaaaggtttcagatgcacagtcacagaca
tcctctaatatggttgtaactcgggtgctcaacctgctcctgacggcgagtgacaaccag
gctgcctaccgctgtgatgccacaaatgaggcaaagagaacaatatcagcacatgctaag
ctactggtccagtttacagctgtgagtatgaagattacagccaaagaagaagtgttttac
cgaggtcagcagatggaactgcagtgtctttctgggagcagcaacccaaagtccgacatt
tcctggaaagtgggcctattgagattccagggagttgcggaggcacccaagaaggctgag
tttgggggcgtttctgtgctcagtaggcttcacctgaatctgacttcacaacaccacaac
cagaaggtgatctgtcaggcctacagtcctgtgttggaagagggaactagcacgttttac
caactgaatgtgctatatcctcctgaattcagttctgagcaagcaacagaagtccaggtg
gtggaggatgatgtggcaaccatccccctgatggtctcagcaaaccccgaggtggtctcc
tgcatttggcttcgccgcaagcagatgctagtcaaaggggaagacatacgccaccactgg
tcagatgaccactctctggagattaggaatgtgacaagaaaagatggcggactttacact
atcaaatgtgaaaatggtgaaggtgtcaacgaaaccactgttaagctggatgtttactat
gctccgactgtcaaggcagagaaagaccctgtgtatgttaaccaggggggaagagcagac
ctgatatgtgtggcagatgccaaccccattataccggagatgttctcttggaaatggctg
ggagaggaagaagtggagatgggagaggagaccaacgaaaacaaatcaagcttgctgacc
attcataatgtgactcgggctcatgctggtttttaccagtgtacggccagcaatggcata
gcactccctggcagtgtggaaatgaagctgctggtgcaattcactccggaacttcggaaa
ggaccccagtggaggaaggttgccagtcgaggggatggcactgccactgctgagttggtg
tgtcaggcagagggcattcctcctgtagagtttacttgggaaaagaaagggatgctcata
gatctggcaaatcccaggtatgaggagaggacagcgagggatggctctttccacaccagt
actctgcgagtggtgaatgtgagcgccactctggactatgccgtcttcagctgcactgct
cgcaactcacttggggaagacaagctagacatccagctcgtcagcacaactcacccagat
ccaccttcgtcatttagtctagtcagtgtcacccatgactccgtcactctagagtggatc
cccggctttaatgggggtttgcagcagcgatatcgcatacgatacatctgggaccagtct
gtcagcttcatgtatgtagatgtcgttccccctgatacaacaaccttcaccgttaccggt
ctgcagtctcagaccacctacagcttctcagttaatgccctaaactccataggagagagt
ggctatgctgacgacggtgcagtactgaccatcaccactgaggtgaagaaagatttagaa
ggggatcaatcggatgataacactcaggctccaagtggcctgtcaacccatttgactgtg
gccttcacagtggtgtttggagtcctgctggtgttgaattcgctgggctgtttctttggg
cggaagtggaaaaacaggcgtgacaaaacaaaggcagagagggacagtgtggtgaatggg
cagaagagtgaagaggatgtgtcaagtcaatcaactagcaactccaataagtacgagagc
agagaaaaaatcaacaccggagcccaacgcaccctcctcgttgacactggatctgaaaca
gagagcaaagtctacgagagctacacagcgtttcaggaagactcccattattattatcct
actggtgactataaaccctaccatggtccacatcctgaggacagacatggccttggtgcc
gttcctgtgaactttgaaagccatttgtatgaagacgtgggtgacagaagagtgtaccag
gacacactggcttcctctcttcctgcctaccgtccacttttctctgatcacagactgatc
cagcaagcagaggactggaggccaccaacagaccctcagggtatcaagagagacgggcag
ttcatgaataatcaacaaccggagcaggattatgatctacccttcgagttgcgaggagaa
ttagtctag
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