Xiphophorus couchianus (Monterrey platyfish): 114139605
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Entry
114139605 CDS
T05908
Symbol
sqstm1
Name
(RefSeq) LOW QUALITY PROTEIN: sequestosome-1
KO
K14381
sequestosome 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04137
Mitophagy - animal
xco04140
Autophagy - animal
xco04217
Necroptosis
xco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114139605 (sqstm1)
04137 Mitophagy - animal
114139605 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
114139605 (sqstm1)
04218 Cellular senescence
114139605 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114139605 (sqstm1)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114139605 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114139605 (sqstm1)
Membrane trafficking [BR:
xco04131
]
Autophagy
Mitophagy
Cargo receptors
114139605 (sqstm1)
Pexophagy
114139605 (sqstm1)
Aggrephagy
114139605 (sqstm1)
Xenophagy
114139605 (sqstm1)
ER-phagy
ER-phagy recepters
114139605 (sqstm1)
Other autophagy associated proteins
Midbophagy
114139605 (sqstm1)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
114139605 (sqstm1)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114139605 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
114139605
NCBI-ProteinID:
XP_027865436
LinkDB
All DBs
Position
23:330792..334463
Genome browser
AA seq
438 aa
AA seq
DB search
MSVTVKAYLLGKDEQVKEIRRFAVDQEVSCSFEYLSRKVAAVFSNLSGSTCSLFYKDEDG
DLVAFSSDDELMMGLSFVKDATFRLYIRERKEHRRDFPLHAFPPFAFGPPPPHHHGPAHT
APPTHMAPPPAVHPNVTCDGCEGAVVGTRFKCSVCPDYDLCSSCQAQGKHTEHALLPIWH
PLQHWFPRGKWMKRMRHCGMWNQNQEQNQNQNQNQEQAGAAKPAADSSAPSASQASVDFL
KNIGEGVAAMLSPLGIDVDIDVEHEGQKTKVTPPTQSGAGPGDVEMNEDGGASSEDGVNQ
GSKVSQQLYKPWNRSGINEFLIRTPGCVSRDSDEEWTHLSSKEVDPSTGELQSLQPEGRA
PPEPGAPQQGPTGLREAALYPHLPQEADPRLVESLAAMLSMGFGDEGGWLTHLLQAKNGD
IGAALDAIQYAKQPRPHQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacagtaaaggcctacctgctggggaaggacgagcaggtgaaggagatccgc
cggttcgcggtggaccaggaggtttcctgcagcttcgagtacctgagccggaaggtggcg
gccgtcttctccaacctgagcggctccacctgcagcctcttctataaagatgaagatgga
gacctggtggcgttctcctccgacgatgagctgatgatggggctgagcttcgtgaaggac
gccacgttccgcctctacatcagagagaggaaggagcaccgtcgggacttccctcttcac
gccttcccccccttcgccttcggcccccctcctcctcatcatcatggccccgcccacacg
gccccgcccacacacatggccccgccccccgccgtccaccctaatgtgacgtgcgacggc
tgcgaaggcgcggtggtgggaacgcgcttcaaatgctcggtgtgtccggactacgacctt
tgctcctcctgccaggctcaggggaagcacactgagcacgctctactgcccatctggcac
cccctgcagcactggtttcctcgggggaagtggatgaagaggatgagacactgtggaatg
tggaaccagaaccaggagcagaaccagaaccagaaccagaaccaggagcaggccggggct
gctaaacctgcagcggacagcagcgccccctctgcctcccaggccagcgtggacttcctg
aagaacatcggtgagggcgtggccgccatgctgagcccgctgggcatcgacgtggacatc
gacgtggagcacgaaggtcagaagaccaaggtgaccccgcccactcagagcggcgcaggg
ccaggtgacgtagagatgaacgaagatggtggagccagcagcgaggacggagtcaatcaa
gggtcaaaggtcagtcagcagctttacaaaccctggaaccgatcagggatcaatgagttt
ctgatcagaactcctggctgcgtgagccgggactctgacgaggagtggactcacctgagc
tccaaggaggtggacccgtccacaggtgagctgcagtcgctgcagccagagggccgggcg
ccgccggagcccggggccccgcagcaggggcccaccggcctgcgggaggccgcgctctac
ccacacctgcctcaagaagccgacccgcgtctggtggagtcgctggcggccatgttgtcc
atgggcttcggcgacgaaggcggctggctgactcacctgctgcaggccaagaacggcgac
atcggcgctgcgctcgatgccatccagtacgccaagcagccccgcccacaccagtga
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