Xiphophorus couchianus (Monterrey platyfish): 114140250
Help
Entry
114140250 CDS
T05908
Name
(RefSeq) toll-like receptor 2 type-2 isoform X1
KO
K10159
toll-like receptor 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04620
Toll-like receptor signaling pathway
xco05132
Salmonella infection
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114140250
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114140250
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114140250
09171 Infectious disease: bacterial
05132 Salmonella infection
114140250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114140250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114140250
04054 Pattern recognition receptors [BR:
xco04054
]
114140250
04090 CD molecules [BR:
xco04090
]
114140250
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114140250
Membrane trafficking [BR:
xco04131
]
Endocytosis
Phagocytosis
Toll-like receptors
114140250
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of breast milk
114140250
Pattern recognition receptors [BR:
xco04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
114140250
CD molecules [BR:
xco04090
]
Proteins
114140250
Glycosaminoglycan binding proteins [BR:
xco00536
]
Hyaluronan
Cell surface receptors
114140250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_9
LRR_NXF1-5
LRR_14
LRR_5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
114140250
NCBI-ProteinID:
XP_027865804
LinkDB
All DBs
Position
3:complement(4372658..4387923)
Genome browser
AA seq
861 aa
AA seq
DB search
MIGELISVGVLLLGAVSSQFSPDPSSPSTFISDEGPCRIYNFGLSADCHGRKLDFVPWRQ
LPVTLESIDLSYNGLHVISAADFQNFPELRILLLQYNNISHIANETFKNNPLLEHLNIFN
NSLHEIPASPLTSLLNLKELSMSNNLYRHATLADSFSKLVRLKVLSLGGPLVMGLKKNDF
QPLKNIQLQAFAIKCSSNLSYYEPGSLEVIHTKQMGFDMAIDQRPNALHHMLRDLANKTL
SAIQFRNLFEFTYYMGDEDIFLNLKDIRAFQLIFHRGKFNENFLKMALLNLQVTPIKRLR
LQYIDFARSPTFVNSGAGSSITKLSLDNLDLWYISNPDVLRFDWRFTWFKRIKQLSIQYV
YFSSVPCDSWAEMEGVELLDVSNNRLNDDVFYNKRCNYKGSMPNLLTFNLSTNELTSLED
LSSLIKHFRKLQVLDLSNNKLGSAEESRYCVWTQNITRFIAHHNYFSSETFHCLPTTVSY
LDLSDCNMDQLDLTYFKKATNLKILLLSGNKIKFIPSKWESPSLQFLALDGNSFGLISKA
SFHHMPQLSQLRAGNNPYHCTCELHAFVQDTIAIGKVNLTDWPLNYRCYHPERFLNTSIS
KYFPGQVACDIRLVIIISVATTAVVILIFVLICYIFDLPWYTRATYQIIQAKYRAHKENL
ARDVGNFNYHAFISYSHSDADWVRDQLLPCLENNKNPYRLCIHERDFMPGKWIIDNIIEN
IESSRKVIFVLSRHFVNSEWCNYELYFAQQRAMGKTFSDVILVLKEPIEPSSLPSKYCKL
KKMLRTKTYLEWPQQVNQQPFFWAQLRSVLGKLTMTREGTNSIRSRNSSERFSGERIPEV
DKHLKGNKKEFQSEIIHRTEI
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgattggtgagttgatcagtgtcggtgttctccttcttggagctgtgtcatctcaattt
tcaccagatccatcttcaccttccacatttatctccgatgaaggaccatgtcggatttac
aactttggtctgtcagcagactgtcatggaagaaagctagatttcgttccatggagacaa
cttccagttacacttgaaagcattgacctctcttataatgggcttcatgttatcagtgca
gctgacttccagaactttcctgagcttcgcatccttctactgcagtacaacaacatttca
cacattgccaatgagacttttaaaaataacccattactggagcatctcaacatttttaat
aactcattgcatgaaattcctgcttcacctctgacatccctcctcaatctgaaggagctc
tccatgtcaaataatctttatagacatgcaactttagcagacagtttctctaaattagtc
agactcaaagttctgtccttgggagggcctttggtgatgggactaaagaaaaatgatttt
cagcccctaaaaaacatccagttacaagcttttgccatcaagtgctcctctaatttaagt
tactacgagccaggaagcttagaagtcatccacacaaaacagatgggctttgacatggcg
atcgatcaacgaccgaatgctctccatcatatgctacgtgatctcgccaacaagacactc
agtgccattcaattccgcaacctgtttgaattcacatactacatgggtgatgaagatatt
ttcctgaacttaaaagacattagagcatttcagctcatctttcacagaggcaagttcaac
gaaaatttcctgaagatggcattactgaacttacaagtgactcccatcaaacggcttaga
cttcagtacatcgactttgcacgttcaccaacatttgtcaacagtggagcaggttctagc
ataaccaagctgagtctggataacttggatctttggtatatcagcaatcctgatgtgctg
cgatttgactggcgcttcacctggttcaagagaataaagcagctgtctatccagtatgtg
tatttcagcagtgtgccttgtgactcctgggctgagatggaaggtgtggaattattagat
gtttcaaacaatcgattgaatgatgatgttttctacaacaagcgatgtaattacaaaggt
tccatgccaaatcttctcaccttcaacctaagcaccaatgagttgaccagtctagaagac
ctatcgtctctgataaagcacttcaggaagctgcaggtactggatctcagcaacaacaaa
ctgggatctgcagaagaaagtcgatactgtgtttggacacaaaatataactcgtttcatt
gcacaccacaactacttttcaagcgaaacatttcactgtctacctaccactgtttcttac
ttggatctgtccgactgcaacatggaccagctggacttgacctactttaagaaagccaca
aacctaaaaattctgttactgagtgggaataaaattaagttcatcccatctaagtgggag
tccccatctcttcagtttttagctttggatggaaattcatttggattgataagcaaggca
tcctttcatcatatgcctcaactgtctcagctcagggcaggaaacaatccttaccattgc
acttgtgagcttcacgcttttgtccaggacaccatcgcaattggaaaggtcaatctcact
gactggccattgaattacagatgctatcacccggaacggttcctcaatacctcaatatcc
aaatattttcctggtcaagtagcgtgtgacatcagacttgttatcatcatttctgttgca
accactgccgtagtgatcttgatatttgttctaatttgctatatttttgacctcccatgg
tacactagagccacgtatcagatcatacaagccaaatacagagcgcacaaggaaaatcta
gcaagggacgttgggaacttcaattatcatgccttcatatcctacagccactcagatgct
gactgggtgagggaccagctcttaccctgtttggagaacaacaaaaacccctatcgtctg
tgtattcatgagcgggactttatgccaggaaaatggatcattgacaacataattgagaac
attgaaagcagtcgtaaggttatttttgtcctttcccggcactttgtgaacagtgaatgg
tgcaactacgagctgtactttgctcagcagagagcaatgggaaagaccttcagtgatgtc
attctggtgctgaaggagcccattgagccaagttctttgcccagcaaatattgcaagctc
aaaaagatgctgcgtaccaaaacatacctggagtggccccaacaggtcaaccagcagcca
tttttctgggcacagctgaggagtgttttgggtaaactcacaatgactcgtgaggggact
aacagcatcaggagtagaaactcatccgaacgattctcaggagaaaggataccagaagta
gacaaacatcttaagggcaacaaaaaagaatttcaaagtgaaattattcacagaactgaa
atttaa
DBGET
integrated database retrieval system
