KEGG   Xiphophorus couchianus (Monterrey platyfish): 114141634
Entry
114141634         CDS       T05908                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145  Phagosome
xco04514  Cell adhesion molecules
xco04672  Intestinal immune network for IgA production
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    114141634
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    114141634
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    114141634
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    114141634
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xco04147]
    114141634
Exosome [BR:xco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   114141634
  Exosomal proteins of epithelial cells
   114141634
  Exosomal proteins of breast milk
   114141634
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 Ig_3 C2-set_2 ig I-set
Other DBs
NCBI-GeneID: 114141634
NCBI-ProteinID: XP_027868092
LinkDB
Position
3:15858731..15860899
AA seq 242 aa
MKRSTAIIFFLNTVNVISLVPHEITYFLGCFENGNTAVQFEFDGEEMLYVDFQTDEIVYT
VPTFIDPDPGQVLVGMSILRDAHDNKEVCSEILGVLKYKDKSPQKEDAPNSMIFSSREVE
LEVENSLICFVNNFYPPSINISWTKNGHPISEGVSLSRYHPNKDQTFRQFSTLTFTPSEG
DIYSCTVEHPALESPTTRIWEAEIIKKDESLWPDIYCGVGLGAGLLGVTVGVFFIVKSQH
VA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgaagcgctctactgccataatcttctttctgaacactgttaatgtcatctctcttgtt
ccccatgaaataacatattttctgggctgctttgagaatggcaacactgcggtacaattt
gaatttgatggtgaggaaatgttatatgttgacttccaaacagacgagatagtttacact
gtacccaccttcattgatcctgaccctggccaggttttagttggcatgagtatccttcgt
gatgctcatgataacaaggaagtgtgttcagaaatactaggtgtgctgaaatacaaagat
aaatctccacaaaaagaagacgctccgaactccatgatcttctcctctagagaggtggag
ctggaagttgaaaacagcctcatctgctttgtaaataatttctatccaccttccatcaac
atcagctggacaaaaaatggccacccaatatcagagggggtgtcactcagtcgatatcat
cccaataaagatcaaaccttccgccagttctcaactttgaccttcacaccaagtgagggg
gacatttactcctgcactgtggagcatcccgcactggagtcgcctacaacaagaatctgg
gaagcagaaatcatcaaaaaggatgaaagtctttggcctgatatttactgtggagtcggt
cttggtgcgggcttgttgggagtcacagtcggagtgtttttcattgtcaagagtcaacat
gtagcatag

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