Xiphophorus couchianus (Monterrey platyfish): 114141956
Help
Entry
114141956 CDS
T05908
Symbol
setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00310
Lysine degradation
xco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
114141956 (setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114141956 (setdb1)
Enzymes [BR:
xco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
114141956 (setdb1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
114141956 (setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
114141956 (setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
114141956
NCBI-ProteinID:
XP_027868707
LinkDB
All DBs
Position
3:complement(14308672..14324790)
Genome browser
AA seq
1256 aa
AA seq
DB search
MESGDGMEVDDWDPSLEDELGVSLDDLKKWIEEAVEQNEAVKKKKAQLIELEEWVEQKEK
EEAKTEKLLNDANQSVLECEKLVRAAYENNGLVYRESSSEDEGGGGGGGLPSEVIEIDDD
DDDDVIAVGCLVPPKTQTPSKDPTLNEASAVLQKTTQQVQKLVQIVAKPSSVSPLIRTAV
QSVVQPGVQGPTPAIFVSQAPSHQTMTQTQPNPNIKEDELKVGMNILGKKRTKTWHKGNL
VAINPVGNGVFKYKVRFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYA
GIVAEMPNNKNRMRFLIFFDDGYASYVILPELYPVCRPLKRTWEDIEDASCRDFIEEYIS
AYPSRPMVLLKVGQIIKTEWEGTWWKSKVEEVDSSLVKILFLKDDKRSEWIYRGSTRLEP
MFNLKLASANTQEKKLAGHQRTRPNMGALRSKGPVVQYTGVEHVGASPAKPPQTTQSQPP
ATTLIQQLQQRPQPQLIQQVQPSLQTQQPQTQQTQQTPQPSPAAQLQRIENKHQMAKKST
SNFIPGVGGTHASKILQAASANASNLLVGKVQSTPSTPTSSFTPLYQRQTSALVSPPSIV
THAMATIPQQPSYRAPTDRIFYLAHTCQPACLNRVRPAKSDLHRGKNPLLTPLLYDFRRM
TGRRKVNRKMSFHVIYKAPCGLCLRNMGEIQNYLFQTRCDFIFLEMFCLDPYVLVDRPFQ
PQRPFYYILDITSGKEDIPLSCVNEIDTTPPPNVKYSKERIPEDGVFINTSSDFLVGCEC
TDGCKDKSKCSCHQLTLQASGCTPGGQINQSAGYSYKRLEECLPTGIYECNKRCKCCSQM
CTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGD
EYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRMKIQPSALVSSSAARKKTQSSSS
SDDSNDEEEKDSKSEDESDSSDDTFVKDNYYTPSSVWRSYTTRGQAKGNKEGSQDSKDGL
SVSAKGQDDEKPPSMPEETGKSKVASWLTSQGLKKETGDKSQIKTEQSKKQDVMTLSDSD
DVQTISSGSEDNKEREKATPASVSGVTKKQVAVKSTRGIALKNSHSLMVKPPGGGVGPSA
QGSKPGHQGQPGGGAENAPKNTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNV
FVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGRLL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggtgatggaatggaggtcgacgactgggaccccagtctggaggacgagttg
ggagtttcactggatgacctgaagaaatggattgaggaggctgtggagcagaacgaggct
gtgaagaagaaaaaagcccagttgatagagctcgaggaatgggtggaacagaaagagaaa
gaagaggcgaaaacagagaaacttctcaacgatgcaaaccagtccgtattggagtgtgag
aagctggtgagggcagcgtatgaaaacaacggcctcgtctaccgagagagcagctcagag
gatgaaggaggtggcggaggaggagggctgccctctgaagtcatcgagattgatgatgat
gacgacgatgacgtcatagctgtaggatgtttggttcctccaaagacacaaacgccatct
aaggacccaacattaaatgaagcctctgcagttctgcagaaaaccacccagcaggtccag
aagttggtccaaatagtcgccaagccttcctctgtttctccattgatacgaacagcagtg
caatctgtagttcagccaggagttcagggcccgacaccagcaatatttgtatcacaagct
ccgtctcatcagacgatgacgcagacgcagccaaaccccaacataaaagaagacgagctc
aaagtggggatgaacatcctgggaaagaaacgcaccaagacatggcataaaggcaacctg
gtggcaattaaccctgttggaaatggtgtatttaagtacaaggtgaggtttgataaaggc
aagagtctgctgtctggaaatcatgtggcgtttgactacaaccccaccctggagagcctg
tacgtcggggctcgtgtcgtcgctaagtacaaagatggaaacttggtgtggctgtacgct
ggaatcgtagcagagatgccgaacaacaagaaccgcatgaggtttctgatcttctttgac
gacggctacgcttcatatgtgatccttcctgaactgtatccggtttgcagaccattaaaa
cgaacttgggaagacatagaggatgcatcttgtcgggacttcatcgaggagtacatctcc
gcctatcccagcaggccgatggtgctcctaaaggtcggccagataatcaagacagagtgg
gaggggacctggtggaagagcaaagtggaggaagtggacagcagcttggtcaaaatcctc
tttctgaaggacgataagaggagcgaatggatttacagaggatccaccaggttggagccc
atgttcaatctgaaactggcttcagcaaacacacaagaaaagaagctagctggccaccag
aggacaaggccaaacatgggagcattaaggagtaaaggcccagtcgttcagtacactggc
gtcgaacacgtcggagcttctcctgccaaacctcctcaaacgacacagagtcagccgcca
gcgacgacactgatccagcagcttcagcagcgcccgcagccccagctcatccagcaggtc
cagccatccctgcaaacccagcagccacaaactcaacaaacccagcaaacccctcagccc
tcaccggctgcccagcttcaacgcattgaaaataaacatcagatggcaaagaagagcacg
tctaatttcatccctggtgtcggcgggacgcatgcctccaagatcttgcaggctgcgtct
gctaatgccagcaacctcttagttggaaaagtgcagagcaccccgagtacacccacgtcc
tccttcacacctctgtatcagagacagacgtccgccctggtgtctcctccttccatcgtc
acgcatgcgatggccaccatccctcagcagccgtcctacagagccccgacggaccgcatc
ttctacctggctcacacctgtcagcctgcgtgtctgaaccgtgttcgaccagcaaaatca
gacctgcacagaggaaagaaccccctcctcacgccgctgctctacgatttcagacgcatg
acgggacgacgcaaagtcaaccgtaaaatgtccttccatgttatctacaaggctccgtgt
ggactttgtctgcgtaacatgggggagatccagaactacctcttccagacccgctgtgac
tttatattcttagagatgttctgtctcgacccgtatgtcttggtggaccgacctttccag
ccacaaaggcccttctattacattctagacatcactagtgggaaggaggacatccctctg
tcctgcgtcaatgagattgataccactccaccacctaatgtaaaatacagcaaggagcga
atccctgaagacggagtatttattaacaccagttcagacttcctggtcggctgtgaatgt
accgacggctgtaaagacaaatccaaatgttcctgccaccagctgaccctgcaggcttca
ggctgcacacctgggggacagatcaaccagagcgctggatattcatacaaacgattagag
gagtgcttacctacagggatctatgagtgcaacaaaaggtgtaaatgttgttctcagatg
tgcaccaaccggctggtgcagcacggcctgcaggtccgtctgcagctctttaagacacag
aacaaaggctggggcattcgctgtctggatgatatagctaagggatcatttgtgtgcatt
tatgctggtaaaatcctgactgatgatttcgctgacaaagaaggtctagagatgggtgac
gagtattttgctaacctggatcacatcgagagcgtggagaacttcaaggaaggctatgag
agcgaggcgcactgctccgacagcgagggcagcggcgtggacgtgtccagaatgaaaatc
cagccgtccgctttagtctccagcagcgctgcgaggaaaaaaactcagagctccagctct
tcagatgacagcaatgacgaagaggagaaagattcaaagagtgaagatgaaagcgacagc
tcagacgacacttttgtgaaggacaactactacacccctagctctgtgtggaggagttac
acgactcgtggtcaggccaagggcaacaaagaagggagtcaggacagtaaagatggactg
agtgtctcagccaaaggtcaggatgatgagaagccgccctctatgccagaggagacgggg
aaaagcaaagtggcttcctggttaacaagccagggtctgaagaaggaaactggagacaag
agtcaaataaagacagagcaatcaaagaaacaggacgtcatgactctatcggacagcgac
gatgttcaaaccattagctccggatctgaagacaacaaagagagggagaaagccactccg
gcttctgtatctggcgtgaccaagaagcaggtggcagtgaaatccacgcgaggcatcgcc
ctgaagaacagccacagtttgatggtgaaaccgcctgggggaggagtcgggcccagcgct
caggggagcaaacccggccaccaggggcagcctggaggaggggcagaaaacgctcccaaa
aacacccggctgttctttgacggcgaagagtcctgctacatcatcgatgccaagttggag
ggaaatctgggacgttacctcaatcacagctgcagtcctaacctgttcgtccagaacgtg
tttgtcgacacacacgacttgagattcccctgggtggcgttcttcgccagcaagcggatt
cgggccgggacagaactgacctgggattataactacgaggtgggaagcgttgaaggcaaa
gagctgctgtgctgctgcggatccacagagtgccgtggacggctgctgtga
DBGET
integrated database retrieval system
