Xiphophorus couchianus (Monterrey platyfish): 114142632
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Entry
114142632 CDS
T05908
Symbol
fbn1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04350
TGF-beta signaling pathway
xco04518
Integrin signaling
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114142632 (fbn1)
09133 Signaling molecules and interaction
04518 Integrin signaling
114142632 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114142632 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114142632 (fbn1)
Glycosaminoglycan binding proteins [BR:
xco00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114142632 (fbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
EGF
TB
FXa_inhibition
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
114142632
NCBI-ProteinID:
XP_027869787
LinkDB
All DBs
Position
4:complement(24750092..24819994)
Genome browser
AA seq
2904 aa
AA seq
DB search
MPGRKRAGRLLQLAVALLASLSLLGGLGGAAEEVDTEDSEAVTRHTDTRANRNKRRGGTD
VLRGPNVCGSRNSAYCCPGWKTLTGGNQCIVPICRSTCGDGFCSRPNMCTCPNGQIASTC
GSKSVQHCNIRCMNGGTCAEDNCQCQKGYVGNHCGQPVCENGCLNGGRCVAPNRCVCTYG
FTGAQCERDYRTGPCFASVNNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQPHPC
RRGFIPNHRTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEISQKCEDLDE
CSNIPGLCGVGECYNTIGSYFCKCPQGFYTSVDGSRCLDARGGYCYGSLVDGRCASQNSQ
LMTKMQCCCDSGRCWSDGSTPEMCPIRGTEEYQRLCIQIPDSNNGVVIPGRIPGSPDLPH
IYPIPIPGEVPGQIPIQVPGHIPVHRPVVTPGQGPGPYHPQGPFPPPPGPVIIQTQNITN
MCQAFRNLCLNGRCIPLPGIGYRCECNMGFKLDTRGECIDDDECDRSPCPHGECMNTPGS
YICQCPPGFQTTATRTECRDLDECVANGRICNNGRCVNTEGSFHCVCNAGFEISTDGKNC
QDMDECLIRNMCLNGLCINEDGSFKCICKPGFLLDTSGRMCVDIDECETPGMCMNGHCVN
TEGSFRCECMAGMAVGLDGRVCVDTHMRSSCYGGYKRGQCVRPLFGAVTKSECCCANTAY
AYGEPCQPCPPESSAEFLALCPSGSGTTGDGRDINECALDPDICQNGICENMLRSFKCNC
NVGFEVDHTGKNCVDIDECYMNKLLCDNGLCRNTPGSFTCQCPKGYRFDTETNACEDVDE
CDSSPCINGDCANSQGSFVCSCSVGSTLDNTGLECIETTKSTCWLKIVNDRCEVNINGAT
LKSHCCATLGEAWNSPCAKCEKDPICGKGFARVRGNNCEDVDECQVFPGVCINGKCVNTQ
GSFFCQCPPGMTVDISGRMCIDLRTEHCYLTHNDERCGTPISGKHRVDACCCSVGVAWGP
ECDECPEQGTPEFNQLCPRGPGFSHRGDFIIGRPFLKDINECRMINTVCSNGRCRNTIGS
FRCRCDNGYALDSDERNCTDIDECRISPDLCGQGRCVNTPGDFECECFEGYESGFMMMKN
CMDIDECERNPLLCRGGECVNNEGSFQCICPEGHEIAPDGSACLDINECELSDRLCRNGQ
CVNMIGRYQCTCNTGYKSSEDRLDCVDIDECTIENGGCESFCTNSEGSYECSCNSGYALM
PDLRTCTDIDECEESPEVCDGGQCTNTPGTFQCLCFDGFMSSEDMKTCLDVDECELNPNI
CLSGNCENTKGSFICHCDLGYSVRKGTTGCTDINECEIGAHNCNRHASCTNTAGSFKCNC
APGWIGNGLKCTDLDECSNGTHMCSNNADCLNTMGSYRCACKEGFSGDGFHCSDSDECAD
NGNLCENGHCLNLPGGFRCECDMGFITTPNGKACGDIDECSFDDICVNGRCQNIPGLFRC
QCSLGYELDRGGGNCTDINECADPAICLSGICVNIPGSYICNCPPDFQLNPTRAGCVDTR
TGSCYRDVRFRGDSSESLDCSNEIGVGVSKASCCCSEGHGWGSPCELCPLGNSTEYKTLC
PGGEGFRPNPVTVILEDINECLELPGLCQGGRCINTFGSFQCECPRGFALNLETRVCEDI
NECEQPGICGPGQCYNTIGNYTCICPTDYMQVNGGHNCMDMRKSYCYRNFYSDNRTCDGE
LTFNMTKKMCCCSYNIGRAWNRPCEQCPVPSTDEFAILCGSERPGYYIDITTGRVIDIDE
CREIPGVCENGVCINMIGSFRCECPVGFVYNDKLLICEDIDECQNGPVCQQNADCLNMPG
SYRCECKAGYRFTSTGQCLDRNECVENPGICNPGQCIDTLGSYRCLCPNGYKTTADRSMC
VDVDECERQPCGNGTCKNTVGSYNCLCYIGFQNSHNGDCIDIDECSTQRGLCRNGQCLNS
VGSFFCVCNDGYEITSDGRLCTDINECAVNPKPCGLGTCDNMDGSYRCICPPGYYLHEET
CKDIDECVQSPENCMFGKCTNFEGSFTCECPEGFQLSASGRRCLDIRVNYCYTKFENGRC
LTPKALNTTKAECCCTFMPGQGWGSPCEICPRKDEDAYRVLCPNEGYKRGPDDSPKDIDE
CLNDPCINGQCINIDGSFRCECPLGYSIDISGITCEDTNECEIGNPCGNGTCANVVGGFE
CACDDGFEPGPMMTCEDINECSQNPLLCAFRCVNVIGSYECKCPTGYVLREDRRMCKDQN
ECEDGIDDCSSRGMTCKNLIGTYMCICAPGYTRPPNGDGCMDLNECSAKPGICKNGRCEN
TVGSYRCRCDQGFVANPTQTECIDNREGFCFTEVLTTLCQMSSSNRNLVTKSECCCDGGR
GWGTTCELCPLPATTQYKKMCPLGPGFTTDGRDIDECRVMGNLCKNGRCLNTLGSYNCVC
KPGYTTDITGTQCVDVDECIQAPKPCNFICKNTEGGYLCSCPRGYALQEDGKSCRDLDEC
STKQHNCQFLCVNTIGGFSCKCPPGFTQHHTACIDNNECSTDPNLCGSNGVCQNSPGSFN
CDCQRGYSLDPSGQSCEDMDECDGNHRCQHGCQNLVGGYRCSCPQGYLQHYQWNQCVDEN
ECMNSQICGGASCHNTLGSFRCLCPTGFNYEQSTGGCTDVNECSTSHNPCKFGCSNTDGG
YLCGCPPGYYRAGQGHCVTGLGFTSGSVSGGQGGEEDDNSLSPEACYECKINGYPKKGRK
RRSVNSTHDSAGEDMQLTEDNTVSLASMDIENTLQLHLNISDLSNREHILEFTPALSTLS
DHVRYSIDNGNEEGLFKINQKDGVSYLHLSKKKVLPPGAYDLQISSVPLYRKKELAELED
QHDKDYLTGQLGDVLKMRVQLILH
NT seq
8715 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcagaaagcgtgcaggacggctgctgcagttggccgtggctctgctggcctcg
ctgtcgctccttggcggactcggaggcgctgcagaggaggtggacaccgaggacagcgag
gcggtgaccaggcacacggacaccagagccaacaggaacaagaggagaggggggacggat
gtcctcagaggaccgaatgtgtgcggctccagaaacagtgcctactgctgcccaggctgg
aagactcttacaggaggaaaccagtgcattgttccaatctgccggagtacgtgcggagat
ggtttctgctccagacccaacatgtgcacctgccccaacggacagattgcctcaacctgt
ggatcgaagtcagtccagcactgtaacattcgctgtatgaacggaggaacgtgtgcggag
gacaactgtcagtgtcagaagggctacgttggaaaccactgcggtcaaccggtttgtgaa
aatggctgtctgaacggaggaaggtgcgtggctcccaacagatgtgtttgtacgtacggc
ttcaccggagcccagtgtgagagagactacagaaccgggccatgctttgcctccgtgaac
aaccagatgtgccaaggccagctcacagggatcgtctgcacaaaaaccttgtgctgtgcc
acagtcggacgggcgtggggtcacccctgtgagatgtgccccgctcagcctcacccctgc
cgaagagggttcataccaaaccaccgcactggggcgtgccaagatgtggatgaatgccag
gccatccccggcatctgccaaggaggcaactgcatcaacacagtggggtcctttgaatgt
aaatgccccgctgggcacaaattcaacgagatctcgcagaaatgcgaagatctggatgag
tgttcgaacattcctggtctttgtggcgtgggtgaatgctataataccattggcagctac
ttctgcaagtgtccccagggattttacacctctgtcgatggatccaggtgtttggacgct
cgcggtggatactgctacggaagcctggtggatggacgctgtgccagccaaaactcacag
ctgatgactaaaatgcagtgctgctgtgacagtgggcgctgctggtctgacggttccacg
ccggagatgtgccccattcgtggaacagaggagtaccagaggctgtgcatccagataccc
gattctaacaacggagtggtgattcccggtcggatccctgggtctcctgacctgccccac
atctacccaatcccaatacctggagaagttcctggtcaaattcccatccaggttccaggt
cacatcccagttcacagaccggtcgtaactccaggccaaggtccagggccgtatcatcca
caaggaccttttcctcctcctccaggtcctgttatcatccagacacagaatatcaccaac
atgtgccaggctttccgtaacctctgcctgaacggccggtgtattcccctgccgggcatt
ggatatcgctgcgagtgcaacatgggattcaagctggacaccaggggcgagtgcatcgat
gacgatgagtgcgacagaagtccttgtccacacggtgaatgcatgaacacccctggttct
tacatctgtcagtgtcctcccggattccagactactgcgactaggacagagtgccgagat
ctggatgaatgtgtcgccaacgggcgtatctgcaacaacgggcgctgtgtgaacactgaa
ggcagcttccactgcgtctgcaacgctggattcgaaatttcaacagatggcaaaaattgt
caagacatggacgagtgtctgatcagaaacatgtgcctcaacgggctgtgcatcaacgag
gacggcagcttcaaatgcatctgcaaacccgggttcctgctggacaccagcggacgcatg
tgtgtagacattgatgagtgcgaaactccgggcatgtgtatgaacggacactgcgtcaac
acagagggatcgttccgctgcgagtgtatggcggggatggcggtgggtctggatggacga
gtctgtgttgacacacatatgcgcagttcttgttacggtggctacaagcgcgggcagtgt
gtccgacctttatttggagcggtgaccaagtcagagtgctgctgtgccaacacggcatac
gcctatggagagccctgccagccctgcccaccagagagctctgctgagttcctggctctg
tgtcccagtggttccggcacaacaggcgacgggagagatataaacgaatgtgccctggac
cctgatatctgtcagaatggaatctgtgagaacatgctgcggtcgttcaaatgcaactgc
aatgtcggctttgaggtggaccacacgggcaaaaactgtgttgatattgacgagtgctac
atgaacaagctgctctgtgacaacggcctgtgcaggaacactcccgggagtttcacctgt
cagtgtccgaaaggatatcgctttgataccgaaaccaatgcctgcgaagatgttgatgag
tgtgactcttccccgtgtatcaacggagactgcgccaacagccaggggtccttcgtgtgt
tcgtgttcagtgggcagcaccttggacaacactggactggagtgcattgagacgactaag
agcacctgctggctgaagatagtcaacgatcgctgtgaggtcaacatcaatggagctacc
ctgaaatcgcactgctgcgccacgctgggagaagcctggaacagtccatgtgctaaatgt
gaaaaagatccaatctgcggtaaaggctttgccagagtcagaggaaataactgtgaagat
gtggacgagtgtcaagtgtttccgggtgtgtgcataaatggcaagtgtgtcaacacacag
ggatcctttttctgccagtgtcctccagggatgactgttgacatcagtggaaggatgtgc
atcgacctgcgtaccgagcactgctacctcacccacaacgacgagcgctgtgggacgccc
atatcagggaaacacagggtggacgcctgctgctgctccgtcggtgttgcttgggggccc
gaatgtgatgaatgtccagaacagggcacaccagagttcaaccagctgtgtcctcggggc
cccggcttctcacacagaggggacttcattattggcagacccttcctcaaagacataaat
gagtgcaggatgataaacactgtgtgctctaacgggagatgcagaaacaccatcggcagc
ttccgctgtcgctgcgacaacggctatgccctggactcggacgagaggaactgtaccgac
atcgacgagtgccggatatccccggacctttgtggtcagggcagatgtgttaacacaccc
ggagattttgagtgcgaatgcttcgagggctacgagagtggcttcatgatgatgaaaaac
tgcatggacattgatgaatgtgagaggaaccctctcctgtgtcgtggaggtgaatgtgta
aacaacgagggcagcttccagtgcatctgccccgaaggacacgagatcgcccctgatggc
tcagcatgtttggatataaatgaatgtgagttgagtgacaggttgtgcaggaacggtcag
tgcgtcaatatgatcggccgctaccagtgcacatgcaacacaggctacaaatccagcgag
gacaggctggactgtgttgatatagatgagtgcaccattgagaacggtggctgcgagtct
ttctgcacaaactcggagggcagctacgagtgcagctgcaacagcggctacgcgctcatg
cctgatctaagaacctgcactgatatcgacgagtgtgaggagagccctgaggtctgcgat
gggggccagtgcaccaacaccccagggacgttccagtgcctgtgctttgatgggttcatg
tcgtcggaggatatgaagacctgcctggatgtggatgagtgcgagctgaaccccaacatc
tgtttgagtggaaactgcgagaacactaaggggtcgttcatttgtcactgcgacctggga
tactctgtccgcaagggaaccacgggttgcacagatatcaacgaatgcgagattggagcc
cacaactgcaaccggcatgcgtcctgcaccaatacagcgggcagcttcaaatgcaactgt
gcgccaggttggattggcaatggcctcaaatgcacagatttggatgagtgttcaaatggg
acacacatgtgcagcaacaacgccgactgcctcaacaccatgggctcgtaccgctgtgcg
tgcaaggaaggcttctcaggagatggattccactgctcagacagcgacgagtgtgcggac
aacggcaacctgtgtgaaaacggccactgtctaaatctccccggaggtttccgctgcgag
tgtgacatgggattcatcaccactccgaatgggaaggcctgcggggatatagatgaatgc
agctttgatgacatctgtgtcaatggacgctgccaaaatatcccaggactgttcagatgt
cagtgcagccttggatatgagctggacaggggtggaggcaactgcacagacatcaatgaa
tgtgcagatccagctatttgtctcagtggaatctgtgtcaatatccctggaagctacatc
tgtaactgcccacccgactttcagctgaaccccactcgggcgggctgcgtagacactcgt
accggaagctgttaccgggatgtgcgtttccgtggagattcatccgagagtttggactgc
tccaatgagattggcgttggggtttctaaggcgtcgtgctgctgctccgaaggccacggc
tgggggagcccatgtgaattatgcccacttggaaattcaactgagtacaagacactgtgt
cctggaggagaaggcttcagaccaaaccctgtcacagtcatcttggaagacatcaatgaa
tgtctagaacttcctggcctgtgccagggaggacggtgcatcaacacatttggtagtttc
cagtgcgaatgtccaagaggctttgccctgaaccttgaaaccagagtctgcgaagatatc
aacgagtgcgaacaaccgggaatctgcggccccggccagtgctacaacaccatcggcaac
tacacctgcatctgccccactgactacatgcaggtcaacggtggccacaattgcatggac
atgaggaagagctattgctacaggaacttttactcagacaacaggacctgcgatggagag
ctgaccttcaacatgacaaaaaagatgtgctgctgctcctacaacatcggccgtgcttgg
aatagaccgtgtgaacagtgccctgtgcccagcaccgatgagtttgccatcctctgcggc
agtgagaggccaggatattacatcgacatcactaccggacgggttattgatatcgacgag
tgcagggaaatcccaggtgtgtgtgagaacggagtatgtatcaacatgataggcagcttc
agatgcgagtgtcctgttggctttgtctacaacgacaagttgctgatttgtgaagatatt
gatgagtgccagaacggacccgtgtgccagcagaacgcagattgcttgaacatgcctgga
agttaccgctgcgaatgtaaagccggataccgcttcacctccaccggacagtgtctggat
cgtaatgagtgcgtggagaaccccggcatatgtaatcctggtcagtgcatcgacacgctg
ggaagctaccgctgcctctgccccaacggctacaaaacaactgccgatcggtcgatgtgt
gtcgacgtggacgagtgcgagaggcagccctgtggcaacgggacctgtaagaacacggtg
ggctcctacaactgcctgtgctacatcggctttcagaactcgcacaacggcgactgcata
gacatcgatgagtgctccacgcagaggggcttgtgtcgaaacgggcagtgcttgaactcg
gtgggaagcttcttttgtgtgtgcaacgacggctatgagatcacatcagacggcagactc
tgtacagacatcaatgaatgtgcagtgaatcccaagccttgtgggctgggaacttgtgac
aatatggacggcagctacaggtgtatttgcccacctggctactatctccatgaggaaaca
tgtaaagacattgatgagtgcgtccagagtcctgagaactgcatgtttggaaaatgcacc
aactttgaggggagcttcacctgcgagtgccccgagggtttccagctctctgcgtcggga
cgcagatgcttagatatccgtgtgaattactgctacaccaagtttgaaaacggacgctgc
ctgacaccaaaggctctgaacacaactaaggcagaatgctgctgcactttcatgcctggc
caaggatggggaagtccctgtgagatctgccccaggaaagatgaggatgcctatcgtgtt
ctgtgtcctaacgagggatataagcggggaccagatgatagccctaaagatatcgatgaa
tgcctcaacgacccatgcattaacggtcagtgcatcaacatagacggatccttccgctgt
gaatgtccactgggatacagcattgatatcagcggaatcacatgtgaagatacaaacgag
tgcgaaatcggaaatccatgcggcaacggcacgtgtgctaacgtcgtcggcgggtttgag
tgtgcgtgcgatgacggcttcgagcccgggccgatgatgacctgtgaagacatcaacgag
tgttcccagaatcctctgctgtgtgcgttccgctgtgttaacgtgatcggctcctacgag
tgcaaatgtcccactggttacgtcctgcgcgaggacaggaggatgtgtaaagaccaaaac
gagtgcgaagatggtatagatgactgttccagcagaggaatgacttgcaagaatctgatt
ggtacatacatgtgcatctgtgcaccaggatacacgcggccgcctaatggagatggatgc
atggacctcaatgagtgttcggctaaaccaggaatctgtaagaacggccgctgtgagaac
acggttggaagctaccgctgcagatgtgaccaaggattcgttgctaaccccacacagaca
gaatgtatcgataaccgcgaaggcttctgtttcaccgaagttctgaccacgctgtgtcag
atgagttctagtaacaggaacctggtgaccaagtcggagtgctgctgcgatggaggtcga
ggctggggaaccacctgtgagctctgccccctgcctgccaccacccagtacaagaagatg
tgtccacttggacctgggttcaccactgacggcagagacattgatgagtgtcgtgtgatg
ggaaacctttgcaagaacggtcggtgtctcaacactttgggctcctacaactgcgtctgc
aaacctggatacaccactgacatcactggcacacagtgtgtggatgtggatgagtgcata
caggcacctaagccttgtaacttcatctgtaagaacacagagggaggctacctctgctcc
tgcccccgaggatacgccctgcaggaagacggaaagagctgcagagatctggatgagtgc
tcaaccaaacagcataattgtcagttcctgtgtgttaacaccattggcggcttctcgtgc
aagtgtccccctggcttcacccagcaccacaccgcctgcattgacaacaacgaatgttca
actgacccaaatctgtgcggttccaacggggtctgccagaactctccgggtagcttcaat
tgtgactgccagcggggatactcattagatcccagtggacagagctgcgaagacatggac
gagtgcgacggaaaccacaggtgtcagcatggctgtcagaacttagtgggtggatacagg
tgcagctgtccccaaggttacctgcagcactaccagtggaaccagtgtgttgatgagaat
gagtgtatgaacagccagatctgtgggggagcgtcatgccacaacaccctggggagcttc
cgctgcctctgtcccaccggcttcaactacgagcagtccaccggaggctgcacagacgtc
aacgagtgctccaccagccacaacccgtgcaagtttggctgctctaacacagacgggggc
tacctctgtggatgcccgcccggatactaccgcgctggacaagggcactgtgtcacaggt
cttggcttcacgagtggcagtgtgagtggtggacagggaggtgaggaggatgacaactcg
ctctctccagaagcctgctatgagtgtaagataaacgggtacccgaagaaaggacgcaaa
cgccgcagtgtcaactcgacacatgatagtgctggggaagacatgcagctcactgaggat
aacacagtaagcctggccagcatggacatcgaaaacacgctccagttgcacctgaacatc
agcgacctcagcaaccgcgagcacatcctggagttcaccccggccttgtccacgctcagc
gaccacgtgcgctacagcatcgacaacgggaacgaagaaggtctcttcaaaatcaaccag
aaggacggagtcagctacctgcatttgagtaagaagaaggtcctcccgccgggggcgtac
gaccttcaaatcagcagcgtccctctgtacaggaagaaagagctggccgagctggaggac
caacatgataaagactacctcacaggacagctgggagatgtactgaagatgagggtgcag
ctcatcctccattaa
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integrated database retrieval system
