Xiphophorus couchianus (Monterrey platyfish): 114143060
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Entry
114143060 CDS
T05908
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03320
PPAR signaling pathway
xco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114143060 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
114143060 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114143060 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114143060 (nr1h3)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114143060 (nr1h3)
Nuclear receptors [BR:
xco03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
114143060 (nr1h3)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
114143060
NCBI-ProteinID:
XP_027870590
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Position
4:complement(6128867..6145028)
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AA seq
464 aa
AA seq
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MSTLSVTDIPDVGHDESKVFDGASELQLDCLAEESGGNTTMKPGGLLSLTDLTQPDDFPV
ASHNGPSLADMSSTLPVEPSDIKLDPCAGDASGSVDGQPVKRKKGPAPKMLGNEVCSVCG
DKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAG
MLEQCVLSEEQIRLKKLKKQQEEETARTSTVVTPTPLQEAPTLDPQQQEMIEKLVAMQKQ
CNKRSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTR
EDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKDDFAKAGLQFEFINPIFEFS
KGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLM
FPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgtgactgatatcccagatgttggtcatgatgagagtaaggtgttt
gacggggcctctgagctgcagctggactgcttggctgaggagagcggtggaaacaccaca
atgaagcccggcggcctgctgtcactgaccgacctcacccagccagatgacttcccagtc
gcctcccacaatggcccgtcgcttgccgacatgagcagcactctgccggtggagccaagt
gacatcaaactggatccgtgtgcaggtgacgcgtctggtagcgtagatgggcagccggtg
aagagaaaaaagggtcctgctccgaagatgctgggcaacgaggtgtgcagcgtctgtggc
gacaaggcttctggtttccactacaacgtgttgagctgcgagggctgcaagggattcttc
cgccgcagcgtcatcaaaagcgcccagtactcctgcaagaacaatggccgctgcgaaatg
gacatgtacatgcgccgcaagtgccagcaatgccggctgcgcaagtgtcgggaggcgggc
atgcttgagcagtgcgtgctttctgaggaacaaatccggttaaaaaagctgaaaaagcag
caggaggaggaaactgcacgcacttccacagtggtcacaccgacccctctgcaggaagca
cccactctcgacccacagcagcaggagatgatcgagaagctggtggccatgcagaaacaa
tgcaacaagaggtctttccttgaccgaccaaaagttacgccttggccccagagtcaagac
ttgcaaaaccgagaagtgcgacagcagaggttcgcccactttacagagctcgcaataatg
tccgttcaagagattgtggattttgcaaagcagcttcctggcttcctggagttgacaaga
gaagaccagatcgctctactaaaaacctccaccattgagattatgctgttagagacatcc
cggcgatacaatccagccattgacagcattacttttctgaaggatttcagctataataag
gatgattttgccaaagcagggcttcagtttgagttcattaaccccatattcgagttttca
aaaggaatgaacgacctgcacctcgatgaggccgaatacgctctgctcattgctatcaac
atcttttctgcagatcggccaaatgtgcaggatcacgatcttgtagagaggctgcagcag
ccctatgtggacgctctgcgctcttacatcatgataaagagaccaaatgatcacctgatg
ttcccccgtatgctgatgaaactggtgagccttcgcacattgagcagtgtccactcagag
caggtttttgctctccgcctccaggacaaaaagcttcccccgctgctgtctgaaatctgg
gatgtcaatgagtga
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