Xiphophorus couchianus (Monterrey platyfish): 114145056
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Entry
114145056 CDS
T05908
Symbol
znf407
Name
(RefSeq) zinc finger protein 407
KO
K26729
Zinc finger protein 407
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114145056 (znf407)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114145056 (znf407)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-Di19
zf-C2H2_REST
zf-C2H2_15
zf-C2H2_2
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-met
zf-C2H2_3rep
zf-BED
zf-C2H2_6
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
114145056
NCBI-ProteinID:
XP_027874197
LinkDB
All DBs
Position
5:complement(27220010..27416709)
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AA seq
1452 aa
AA seq
DB search
MEKNLELGEGDAESKSAENDFVRVQADDMEMEKTTGVSPGSTGELDKAEEERAERPLPDG
GREGGENVCKVCGFSTMYPRSLKTHYTRKHGKVIGKNPRPHEEKVNNLNASGVQEQATIK
TEEDDGEQNLSPDLDQEETNTAQERRVSKRTPKPKIIYSCNYCGHEFRDKAPLDVHIQRY
HAKDVPLTFEAEENVGESEEAAESCSTEKASPSKVAPKRVLSRFQLKCPICDFRVGSTAV
LERHARDKHPALEWFRCKVCNFFAATSEWMSSHLSSDGHLEQQKVKKSSEASSFEQCVEK
VSRDCVGDDAVGGHLDQVVPGDEGTTLTEEQQKTDELSEAAESVLTEEEDEELEPPRKKR
GRPKQGSSTTCGYCGLVVSNATNLSVHVRRKHSKDYGYSCTLCNYSCVTKGDMDRHCFTK
KHVKRAQESSSKSPARADSSAPLLEPTSAPATATQPTDAKQEQDGELLEERKDEDQTESD
TSQQKSKYDSVNACSLCDFVAQSIPSLHLHVKRKHTKDFEYICLACSYYAVTSREMYRHA
STEKHKQKSQKYLEHQKSKEQRASEHPLKGTEINEPPGQNSSTGCEHPNPSDWSGSCYID
SPCVEMQDPAALSVTTEIVRVVVGGTGGEDEMQVTTNTSSTDNEPQSTNQTAEKTVQQAS
AELQLPLDESAHEENQNLECTQAGEETSKEDVAVVDMQMSKAPPFDASIVSFKALAEQEV
TLAESMALEGEAPVISLTGGPISSVMSPSSTYVRKLKPKEVKVRDEAKGSNSRIRCEDCG
FMADGLSGLNVHISMKHPSKERHFHCLVCGKSFYTESNLHQHLSSAAHLRNEQNSVEELP
EGGASFKCVKCTDRFETEQDLFVHIKEKHEELLREVNKYVLEDTEQINREREENQGSVCK
YCGKVCKSSNSMAFLAHIRTHTGSKPFMCKICNFATAQLGDARNHVKRHLGMREYKCDIC
GWAFVMKKHLNTHLLGKHGVGQRKERKFECDLCDRSFSEKWALNNHMKLHNGEKPYKCIW
PSCHYAFLNLSAMKDHYRTHTGEKSYLCDLCGFAGGTRHALTKHRRQHTGERPFKCKLCN
FASTTQSHLSRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPQCTY
ATNSPMEFRNHLKDNHFDIENPDLAYLHAGIVSKSFECRLKGQGATFVEAESVESPEDRK
GSSEASGHEEAVQQVIIIQGYGEEDVAIDQALEESAAATLQTLAMAGQVAEVLHITEDGQ
VIASGREVASAGAHLAGGSTQYVVVESGDARKDLHAAAGQSHIVSESSTALDALLTAVSE
MGHQEKMQGEATVVHEVLAPEASTEAHAAVDVKQEEQEEVQVIQEAGHENMQEVLKLAAS
QMMKEGLTQVIVNDEGTHYIVTELEDCTLQVEEAVYSGAAAGDGEAQQAEQQAGEEMVVY
LDGASHNIVLEG
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaacctggaattaggagagggggatgctgagagcaaatcagctgaaaacgac
tttgtgagggtgcaggcagacgatatggagatggagaaaaccacaggggtctcccctggt
agcactggtgaactcgataaggcagaggaagaacgtgccgagaggccattgccagacggt
ggacgcgagggcggggagaacgtttgcaaagtttgtgggttctcaaccatgtacccgaga
tcactgaaaactcattatacaagaaaacatgggaaagtcattggaaaaaatcctcgacct
catgaagaaaaggtaaataatcttaatgctagtggagtccaagagcaagccaccataaaa
actgaggaagacgatggtgaacaaaacctgagtccagatttagaccaagaagagactaac
acggctcaggagaggagggtcagcaagcgaaccccaaaaccaaagattatttattcctgc
aactactgtggacatgaatttagggacaaggctcctcttgatgtccacattcagagatac
catgccaaagatgtccctttaacttttgaggcggaggagaacgtgggcgaatcggaggaa
gccgcggagagctgcagcactgaaaaggcttcaccgtcaaaagtggcaccaaagcgtgtt
ctcagcaggttccagctgaaatgtccaatctgtgatttcagagtgggcagcactgcagtg
ctggaaaggcatgctcgcgataaacaccccgccctagagtggttccgctgcaaagtctgc
aacttctttgccgcgacttcagagtggatgagttctcacctgtcgtcagatggccatttg
gagcaacagaaagtaaagaaaagctcagaagcttcttcatttgaacagtgcgttgagaag
gttagcagagactgtgtgggagatgatgcagttgggggtcacctcgatcaagtggttcct
ggagatgaggggactactttgaccgaagaacaacagaaaactgatgagctgtcagaggca
gccgagtctgtgttgactgaggaagaagatgaagagcttgaacctccaagaaagaaaaga
ggaagaccaaaacaagggtcttctactacttgtggatactgtggcttggttgtgtccaat
gccactaatcttagtgttcatgttcgccgcaaacacagcaaagattatggctacagctgc
actttgtgcaactacagctgtgttaccaagggagatatggatcgtcactgttttactaag
aagcatgtgaaaagagcacaggagagttcaagtaagagcccggcgagggccgactccagt
gcgccgttgctggagccaaccagcgcaccagctactgccacacagcctactgacgcaaag
caagaacaggatggggaacttctcgaagaacgcaaagatgaagaccaaactgagtctgac
acaagccagcaaaaaagcaagtatgactctgttaatgcttgcagtctttgtgattttgtt
gcccagtcaatcccatccctccatctccatgtcaagagaaagcacaccaaagattttgag
tacatctgtctagcatgcagctactatgccgttactagtagggaaatgtatcgtcatgct
agcacagagaagcataagcaaaagagtcagaaatacctggaacatcaaaagagcaaagaa
caaagagcttcagaacatcctttaaaagggacagagatcaatgagcctcctgggcagaac
tccagcactggctgtgaacatccaaacccctcagattggtcgggatcttgttacattgac
agcccgtgtgtggaaatgcaagatccagctgcgctatctgtcactacagagattgttcgt
gttgtggttggtggaactggaggtgaagatgaaatgcaagtgacaactaatacatcatcg
actgacaatgaaccacagtcaaccaaccagacagctgagaagactgtgcagcaggcttca
gctgaacttcagcttccactagatgagtctgcacatgaagagaatcagaatttagagtgt
acacaagcaggagaggagacttcaaaggaagatgtagcggttgttgatatgcaaatgtcc
aaagctcccccgtttgatgccagtattgtttccttcaaggcccttgcagagcaggaggta
acattggcagagagtatggcactggaaggagaggcccctgtcatatctttgactggaggg
ccaatatctagcgttatgtcccccagctccacatatgtgagaaagctcaaaccaaaggag
gtgaaggttagggatgaagccaaaggcagcaactctcgcatacgctgcgaggactgcggc
ttcatggcggacggcctcagtggcctcaacgtccacatctcaatgaagcacccgtccaaa
gagaggcacttccactgtctggtgtgcggcaagtccttctacaccgagagcaacctgcac
cagcacctctccagcgccgcccatctccgcaacgagcagaacagcgtggaggagctgccc
gaggggggcgcgagcttcaagtgcgtgaaatgcaccgaccgcttcgagacggagcaggac
ctgtttgtccacatcaaggagaaacatgaggagctcctgcgggaggtcaacaagtatgtg
ctggaggacacggagcagatcaaccgcgagcgcgaggagaaccagggcagtgtatgcaaa
tactgtggcaaggtgtgcaagagcagcaactccatggccttcctggcacacattcgcaca
cacaccggatctaagcccttcatgtgtaagatctgcaactttgccactgctcagctggga
gacgcccggaaccacgtgaagaggcatctcgggatgcgagagtacaaatgtgacatttgt
ggatgggcctttgtgatgaagaaacacctcaatacccacctgctgggaaaacacggagtc
gggcagcgtaaagaaaggaagttcgagtgcgacctgtgcgaccgctccttcagcgaaaag
tgggccttgaacaatcacatgaaactgcacaacggggagaagccgtacaagtgcatctgg
ccgtcctgccactacgccttcctcaacctgtcggccatgaaggaccactacaggacgcac
accggagagaagtcctacctctgtgacctgtgtggcttcgcaggaggcacaagacacgcc
ctcaccaaacacagacgccaacacacaggagagagacccttcaagtgtaagctctgcaac
ttcgcctccaccacacagtcccacttgtcgcgccacaaacgtgttcacaccggagagaaa
ccgtaccgctgcccctggtgcgactacaggtccaactgtgccgagaacatccggaagcac
attctccatacggggaaacatgaaggagtgaagatgtacaactgcccccagtgtacctac
gccaccaactcccccatggagttccgtaaccacctgaaggacaatcacttcgacatcgag
aacccagaccttgcctaccttcatgcaggtattgtgtccaagtccttcgagtgccgtctg
aaaggccaaggagcaacatttgtggaggccgagtctgtggaatcgcccgaggacaggaaa
ggctcgtcggaggcatccggccacgaagaggccgtccagcaggtcatcatcatccaggga
tacggtgaggaggacgtggccatcgaccaggccctggaggagtcggccgccgccaccctg
cagacgctggccatggccggtcaagtggccgaggtgctccacatcacagaagacggacaa
gtgatagcctcgggcagggaggtggcctctgcaggcgcccacctggctggaggcagcacc
cagtacgtggtggtggagtccggggacgccaggaaggacttgcatgcggctgcgggtcag
agtcacatcgtttccgagtcgtccaccgctctggacgctctgctcaccgccgtcagcgaa
atgggccatcaggagaaaatgcaaggagaggcaaccgtcgttcacgaagtgttggccccc
gaagcctcgacggaggcccacgccgccgtggacgtgaagcaagaagagcaagaggaggtg
caggtcatccaggaggctggccacgaaaacatgcaggaggtgctgaagctcgccgcctcc
cagatgatgaaggaaggccttacccaggtcatcgtcaacgacgagggaacccattacatt
gtgaccgagctggaggactgcaccctgcaggtagaggaggcggtgtacagcggtgcagcc
gccggggacggcgaggcacagcaggcggagcagcaagcaggagaggagatggtggtctac
ctggacggagcttctcataacatcgtcctggaaggctga
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integrated database retrieval system
