Xiphophorus couchianus (Monterrey platyfish): 114145225
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Entry
114145225 CDS
T05908
Name
(RefSeq) guanine nucleotide exchange protein smcr8a-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114145225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114145225
Membrane trafficking [BR:
xco04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
114145225
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Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
114145225
NCBI-ProteinID:
XP_027874502
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Position
5:39110874..39120497
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AA seq
880 aa
AA seq
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MIGSPDLLPFTGSGGFEEEGEEPEVHTLPEEFSVRLLPPHSPWRTAAQFHRDFILVAEFS
EQVGPKPVLTIPNDPKVIGSFDLNHFSVRIMSVDYQASGPGHTAPAPPGPRLSFSEDSKV
ILGDSADDSFAYVHHLTLYDLEARGMVRPFCMAYVCSDRTKLMENFSELSECFSQASDSL
KTGNRQAFSSELQRKLQELEYRRRALLQDTHVSTGAGGRADELEALEHLILNHRELLRQV
TSYPNRKLQQPDFLPYDTADLPLEPSSPCLPSSASCRSESLLKPLEELCNFYFLSLVKNQ
LSDTERRLRGDRCVLRTARVSQLLSRKVKLTNFLFELCCPVDAEEEEEEDEAERVLGSTV
GAVGGQSEKHGGELFSCVEEIQIKMEGGGGGRATPDPSAFTDMMGSMSSSDSIEVLGTEK
SYRSQRVAVVSDSRETRVGTTDVILQHAAGDAGLQRLRAPARRANSEDSIEVLSTTESIV
PDDLSAITEEEAEHHTLTNGFEEEEESQADCKPEKVLKEERMKNTATAGDESGESAGRKE
LLEEIMFNVPDKDNLLTEKSNEVHKDKMNKLVQAGNAVESRQKKTRPVFDLHVKMAPKSV
GAEGALRMPPCALLRLLSVDEFSDCTSFTSSSEPPSPTTVNLTSTCVDKKRRRRRAGLRA
LRFIKQLSFSQHAIFCLLIGRPLVVIGGDEQLVRKLVDGLRLFLPAPGADGSAVMSCLAT
PLQLTDLLTWRLIGIHRSSSRASSSILQSLTQLSRYIAVLDLDQKTLRCPSYAGSLVSFL
ANPHTGIGRGLTYLLHLESCLTALANRVLLQTFTAASQLHRAIAEEKDSQQAPQLCSSEN
DFRVMHFLTDLITQRHTGHGPPPFRFSYSSVQLHRNTYPT
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcaccggacctgctgcccttcaccggcagcggggggtttgaggaggaagga
gaagaaccggaggtccacactctgcctgaggagttctctgtccgccttttgccgcctcac
agcccctggagaacagcagcccagtttcaccgggactttatcctggtggctgaattctcg
gagcaggttggtccaaagcctgtcttaacaataccaaatgatccgaaggtcatcggctcg
tttgaccttaaccacttctccgtccgcattatgtctgtggactaccaggcgtccggcccg
ggtcacacagcccctgctccgcctggaccccgcctcagtttcagcgaggactccaaggta
atcctgggagactcagcagacgactcgtttgcgtacgttcatcacctgaccctatacgac
ctggaggctcgggggatggtgcgacctttctgcatggcctacgtctgttcggaccggacc
aaactgatggagaacttctctgagctgtccgagtgtttttctcaggcctctgacagtttg
aagacgggaaacaggcaagcgttctcctctgaactgcagagaaagttgcaggagctcgag
tacagacggagggccctgctgcaggacacacacgtctccacaggagcaggaggcagagct
gatgagctggaagctttagagcatctgatcctgaaccacagagagctccttcgccaggtc
acatcctacccaaacaggaaactccagcagcctgacttcctgccctacgacacggccgac
ctgccgcttgagccgtcctctccctgccttccctcctctgcctcctgcaggtctgagtcg
cttctgaagccactggaggagctctgcaacttctacttcctgtccctggtgaaaaaccag
ctatcagacacagagcggcgtctgcgtggcgacaggtgcgtcctgcgaactgctcgcgtc
tcacagctactgtccaggaaggtgaaacttacaaacttcctgtttgagctgtgctgccct
gtggatgctgaggaggaagaggaggaggatgaagcagagcgggtcttggggagcaccgtg
ggagctgtgggaggtcaatcagaaaagcatggtggggagttgttctcctgtgtggaagaa
atacagataaagatggaaggagggggaggcgggagagcgacccctgaccccagcgcgttc
acagacatgatgggcagcatgagcagcagcgacagcatcgaggttctcgggacggagaag
tcgtaccggagtcaacgcgtggccgttgtgtccgacagcagagaaacccgtgttgggacg
acagacgtgattctccagcatgcagcaggagacgcaggccttcagcgcctgcgagcccct
gccaggcgtgccaacagcgaggacagcatcgaggttctcagcacgactgagtccatcgtc
cctgacgacctgtccgccatcacagaggaagaggcggagcatcacactctgaccaatgga
tttgaggaagaggaagagtcacaggctgactgtaagcctgaaaaagtcctcaaggaggag
aggatgaagaacactgctactgcaggggacgaaagtggagaatctgctggaagaaaagaa
cttttggaggaaataatgttcaatgtaccagacaaagacaatttactcacagagaagagt
aacgaagtccataaagacaaaatgaataaactggtccaagctggaaatgcagtggagtcg
aggcagaagaagacgaggccggtgtttgacctccatgtaaaaatggctccgaaaagcgtc
ggggcggagggagctctgcgcatgccgccctgcgctcttctgaggctgctcagcgtggac
gaattctccgactgcaccagcttcaccagcagctcagagccaccatctcccaccacagtc
aacctcaccagcacatgtgtggacaagaaaaggaggaggaggagggctggcctgcgagcc
ctccggttcatcaagcagctctccttctcccagcatgccatcttctgtctgctgattggc
cggccgctggtcgtcatcggtggagacgagcagctggtgaggaagctggtggacggcttg
aggctcttcctgccagctcctggtgctgacgggagcgccgtgatgtcatgtttggccacg
cccctccagctgactgacctgctcacctggaggctcataggaatacacagatcatcttcc
agagcatcatcttccatccttcagtctctgactcagttgagtcgttacatcgctgtgctg
gacctggatcagaagacgctacgctgtccttcatatgccggatccctggtcagcttccta
gccaaccctcacaccggcatcggccgcggcctcacctacctgctgcacctggagagctgc
ctgactgcgctggccaaccgggtgctgctgcagaccttcaccgctgcttcccagcttcac
agagccatcgccgaggaaaaggactcgcagcaagcaccacaactctgcagcagtgaaaat
gattttcgagtgatgcactttctgactgacctgatcacgcagcgccacaccggacatgga
ccgccgcctttcaggttttcctacagctctgtgcagcttcacaggaacacatatccaaca
taa
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