Xiphophorus couchianus (Monterrey platyfish): 114145942
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Entry
114145942 CDS
T05908
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114145942 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114145942 (nup210)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114145942 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_4th
Ig_NUP210_9th
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_6th
Big_2
NUP210_Ig
TMEM61
Motif
Other DBs
NCBI-GeneID:
114145942
NCBI-ProteinID:
XP_027875440
LinkDB
All DBs
Position
1:20702160..20737580
Genome browser
AA seq
1881 aa
AA seq
DB search
MSLVKFFVLFFITVTRVYGSSKLNIPKVLLPLARSTKINFTLETTEGCYRWSSTRPEVAS
IQPVEEDADRGCSQKAVLQALSTQPTRLTSIIFAEDVVSGQVLRCDAIVDIISEIQIVST
TRELHLEDSPLALRIHALDSEGNTFSTLAGLVFDWTLVKDVDVNGFTDSYNSLRVLKFSE
STYTPPGYISEMERVGKQGDIILVSGLKTGHAKLKAKIQESLYKDVGAAEVRLLILENIL
LSPAHDVYLMAGTSIRYRVLKIRQGTITELTMPCDQYELHLRNSVVDPNGDPGVSVASLD
QSTSKVTGVQMGHINVVLDHKSLRMQGVSRLPNSTLYVVEPAYLGFKIHPGESWVLETGR
VYNILIEVFDKSGNKIYLSDNVRISTVFPKEYFEVLESSVNGSYHHVRPLKDGLTLIDAT
LTAVEDENRKVHALVNPVHNEQDVEIYNPIVLTPSILTFPWQPKVGAYQYTIKATGGSGN
FSWTSSNTDVATVTVKGAMTTVSDIGVTVIYAHDLRNPHHFGQMKVYVVEPVAMDFAPCP
VEARLGQDLELPLRIFGLLEELEMERVMLSDCSHFDLLVEEENQGVFELLEGRLAPSQKH
CSGVQAKALTPGYTVLTVSYTHGNVHLSAKITIAAYLPLRAIDPVSVAVVTLGSSKDMLF
EGGPRPWVLEPSKFFCFSRAEDESSMSLNLISPSCQNYNRHWLRATCRVLGEQVLEITVG
NKATVTNPFPAVEPAVVKFVCALPSRLTLVPVYTSPQLDLACPLMQQNKQVVPVSNYRNP
VLDLAAFDQQGRKFDNFSSLDILWESSKGSLASIEPTMPMDLQLFEDSKKQMKLHGRQTV
LVHQQTGIAAITVTAVGYQVPHLQAAKVSRPYEPLTPVSATLELLLVEDVKVFPERVTIY
NHPDVRLDLTMQEGSGHFFMNTSMKGIVDVVLQEALGEARVSPVRTGTVSVMVHDLCLAF
PAPAKSIVHVSDILEVNVRVVDKVQIGKFVKAYVRVLDDNRKPFSASYFQSMKLKLKAAS
VIVSLTPLAELTESDTAVFRVKGLSIGQTTLSAVVVDKNGRKIASAPQQIEVFPPFKLIP
RKMTLLIGAMMQITSEGGPQPQSNILFSISDEEIASVNAVGHVRGVSVGNVTVKGLVQAV
DAETGKLVVISQDQVEVEVVILSAIRIRAPVTRIKTGAQMPVYVMGLTNSQTPFSFGSVV
PSLTFSWSTTKRDILDVHSRHIEANVELQPEHNFGMTVTGRTRGRTGLKVVLRVSDPNAQ
QLEGNVLELRDEIQIQVYDKLHVLHPQVEAEEILMAPNSALKLQTNRDGVGVLSYRMLDC
PDQLVVAQVDNKGLLSSGSLTGMCSLLVTSQEIFGVNQTLILTVKVVPVSYVRFSASPVL
NTLAREGLGAFPLGILLTFTVHFHASTGEAMHSSNSQLTFSTNRDDLVQLGVGPTNHSVT
VRTVNVGLTLLALWDNENMGVADYVPLPVHHAIHMDEANKLVVGDVVCFQAKLTNPDGAP
GTWSSSADSILQVDPKSGAAVARDSGVVTVFYEISGVLKTYREVIVEAPTTTTAMTQPSP
VRSGKETKVLLTTRERGTNLIGTCLPTQIAAIAKLEPEKSVSCLLSFTSDTIDFSPNDVF
KTHTRFDSSIGLYTCTMTLQPTTNQQTRLLSVSMTNLLVKAGLVDSVFTGEQVSAQLPIE
PGLYSDQTELLLSNLHPSAEFTVYGPPAVLSTIEVTSTSPSLVVYEKEVQQGFPSYTKYI
VNAVDPHSAVSASVDISSASSGQSLVIPVSFIHVNDPNAAKQAAPPSFIEDNNSFHSFIN
CYQMMFCTLFALLAGTAIIIIVLHSLLSPKEQSYHPAFIQRTPPPLTGLDSPAANSFNRM
MPRVSPNSTYRSQLYSPDYKS
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggtaaaattttttgtgttattttttataaccgtcacacgggtctacggttcg
tcgaaattaaatattcccaaagttttgctaccacttgcgagaagcacgaaaattaacttc
acactggaaacgactgaaggctgctacagatggtcttccactagacctgaggttgcaagc
atccagcctgtggaagaggatgctgacagaggctgctctcagaaggctgtcctgcaggct
ctgtccacccagcccaccagactgaccagcatcatttttgctgaagatgttgtctctgga
caggtgctccgctgcgacgccatcgttgacatcatcagtgagatccagatcgtctctacc
accagagagctgcatcttgaagactctccactggcactcagaattcatgcactggattca
gaaggaaataccttctctacccttgccggtttggtgtttgactggaccttagtgaaagat
gtagatgtgaatggattcacagactcctacaattcattacgggtgcttaaattctcagag
tccacatacactcctcctggatacatatctgaaatggagcgagtgggcaaacaaggcgac
atcattctggtgtcgggtctgaaaacaggacatgctaagctaaaggccaaaatacaagag
tctctgtataaggatgtgggtgctgctgaagtgagactgctgattttagagaacatcctg
ctgagccctgcacatgatgtctacttaatggcaggaacttccatcagatacagagtcctc
aagataagacaaggcactatcacagagctcacaatgccttgtgaccagtatgaactacac
cttagaaacagtgtggttgatcccaatggagacccaggagtcagtgtggcctctcttgat
cagagtacctccaaagttacaggagttcaaatgggacacatcaatgtggtgttggatcac
aagagccttcgaatgcaaggagtgtctcgcctccccaacagcacgctctacgttgttgag
ccagcctacctcggttttaaaattcatccaggagaaagctgggttcttgaaacaggcaga
gtgtacaacattcttattgaagtgtttgataagtctgggaacaaaatttacctctctgac
aatgtccgtataagcactgtttttcctaaagagtattttgaggtcctggagtcctctgtg
aatggatcatatcatcatgtcagacctctcaaagatggtcttactcttattgatgctacc
ctaacagctgttgaagatgaaaatagaaaagtccatgcactcgtcaacccggtgcacaat
gaacaggatgtggaaatttataaccctatagtcctcactcccagtattctcacatttcca
tggcaaccaaaagttggagcatatcagtacacaataaaggcaactggtggaagtggaaat
ttcagctggacttcatcaaatacagatgtggccacagtgactgtgaaaggagcgatgacc
acagtcagtgacattggtgtcactgtaatttatgctcatgatctacgtaacccacatcac
ttcggacagatgaaggtatatgttgttgagcctgtcgccatggactttgctccatgtcca
gtagaagcccgcctgggccaagatctggaactgccccttcggatctttgggttgctggag
gagttggagatggagcgagtcatgttgagtgactgctcccactttgatctgctggtcgag
gaggagaaccaaggagtgtttgaactgttagaagggaggctggctcctagccagaagcac
tgcagtggagtgcaagccaaggccctgactcctggctacacggtgcttactgtcagctac
actcatggcaatgtgcatctcagtgccaagatcactattgctgcctacctccctctcaga
gcgattgaccctgtgtcggtggctgtagtcacacttggatcttccaaagacatgttgttt
gagggaggaccacgtccttgggttttagagccctcaaagtttttctgtttttcacgagcg
gaggatgagagcagcatgagcctcaatctgattagtccttcctgtcagaactataatcgt
cactggcttagagcaacctgcagggtgctgggagaacaggtgttagagatcacggtggga
aacaaggccactgtgaccaatccatttccagctgtggagccggcagtggtcaagtttgtt
tgtgcacttccatcacggctcacactggttccagtttataccagtccacagctggactta
gcctgccctttgatgcagcagaataaacaagtggtgcctgtttcaaattatcggaaccca
gtgttggacttggcagcttttgatcagcaaggaaggaaattcgacaactttagctcttta
gacattttgtgggagtcatcaaaggggtccctggctagtattgagcccactatgcccatg
gaccttcaactgtttgaagacagcaaaaaacagatgaaactacatggacgtcagacagtt
cttgtccatcaacagacaggaattgctgccattactgtgacagctgttggataccaggtt
ccacatctacaagctgccaaagtttccagaccttatgaacctttgacacctgtctctgcc
acactggagcttctgttggttgaagatgtgaaggtttttcctgagagagtgactatttat
aaccacccagatgtgcggttggatctgactatgcaagaaggttcagggcacttttttatg
aacaccagcatgaaggggattgtggatgtcgtgctccaagaggcgctaggcgaagctcgg
gtttctccagtccgtacagggacagtttctgtaatggttcacgatctttgtctggctttc
ccagcacctgccaaatcaatagttcatgtttctgacatcctggaggttaatgtcagagta
gttgacaaggtgcagattggcaaatttgttaaagcttatgtcagagtgttggatgataac
aggaagcccttctcagccagctatttccaatccatgaaattgaaactcaaggcagcctct
gtaatagtttctctgactcctttagcagagctgacagaaagtgacacggcagtgttccgg
gtgaaaggactctccatcggtcagaccaccctgtcagctgttgttgtggataaaaacggg
agaaaaatagcctcagcaccacagcaaattgaggtgtttccgcctttcaagcttattccc
aggaaaatgactctgttaattggggcaatgatgcagatcacatctgagggtggtcctcaa
cctcaatccaacatcctgttttccatttctgatgaggaaatagcttctgttaatgctgtg
ggccatgttaggggagtctctgttgggaatgttacagtgaaaggattggtccaagctgtt
gatgctgagactgggaagcttgtggtcatatctcaggatcaagtagaggttgaagttgtt
attctgtcggccattcgaatcagagcaccagttacaagaataaagactggagcacagatg
ccagtatatgtgatggggctgaccaatagccagacgcccttctcctttggcagtgttgta
cctagtctcactttttcttggtctaccactaagagagacattctggatgtccactccagg
cacattgaggctaatgttgaacttcagccagagcataattttggcatgacagtgacaggg
agaacaagaggccggaccgggctgaaggtggttctcagagtttctgacccaaatgctcag
cagctagagggaaatgttctggagctcagagatgagatccagatccaggtctatgacaag
ctacacgtgcttcatcctcaagtagaagctgaggagatcctgatggctccaaactctgcc
ctcaagctccaaactaacagggatggtgtgggtgtgctctcctaccggatgctggattgc
cctgaccagcttgttgttgctcaagttgacaataagggcctcctctcatctggttctctc
actgggatgtgttctctcctggtcacctcacaggagattttcggtgtcaatcaaactctc
atcctcactgtgaaggtggttcctgtgtcctacgtccgcttcagtgccagtccggtgctg
aacacgctcgctagagagggcctgggcgcctttcctctgggaatcctgctcaccttcact
gtccactttcatgctagcactggagaggccatgcacagctcaaactcccagcttacattt
tctacaaacagggatgatctggtccagctgggagtcggccccactaaccactcagtgaca
gtgagaacagtcaatgtaggtctcacacttctggcactgtgggataatgaaaacatgggc
gtggcggactacgttccacttcctgttcatcatgctattcatatggatgaagccaataag
ctggttgtgggtgatgtggtctgcttccaagccaagttaacaaacccagatggagctcct
ggcacatggagttcctctgcagatagtattctccaggtggaccctaaaagcggggcagct
gtagccagagactctggcgtagtgactgtgttctatgagatatctggtgttttgaaaacc
tacagagaggtaattgtggaagcgcctactacaacaaccgctatgactcaaccttcaccc
gtccggtctggaaaggagacaaaagttctgcttactaccagagagagaggaaccaacctc
atcggaacctgtttgcctacccagatagcagctattgcaaagcttgagccagaaaaatct
gtcagctgccttctcagcttcaccagcgacactatcgacttctctcccaacgatgtgttc
aaaacacacacgcgctttgactccagtattggtctgtacacatgcacaatgaccctgcag
cccacgactaatcaacagacccgtttacttagcgtgtccatgaccaacctgctggtgaag
gctggcctagtcgacagcgttttcaccggagagcaggtcagcgcccagctgcccatcgag
ccggggctttactcagaccagactgagctgctactctccaacctgcacccgtctgctgag
ttcacagtttacggcccccccgctgttctgtccaccatcgaggtgacgtccacttctccc
agtcttgtcgtctacgagaaggaggtccagcaaggattccccagttatacgaagtacatt
gttaacgctgtggacccgcattcagcagtttcagcttctgtcgacataagcagtgcttct
tctggccagagtttggtcatccctgtcagttttattcatgttaatgatcccaacgctgcc
aagcaagcggctcctcctagtttcatagaggacaacaactccttccacagcttcataaac
tgctaccagatgatgttctgcaccttgttcgctctgctggcgggcacagctatcatcatc
attgtcctgcactctttgttgtctccaaaggagcagtcgtatcacccggctttcatccag
agaacaccgccacccctcactggtctcgactcgcccgcagcaaattctttcaaccgcatg
atgccgagagttagtccaaacagcacgtacagatcgcagctctattctccagattacaag
tcctga
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