Xiphophorus couchianus (Monterrey platyfish): 114146400
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Entry
114146400 CDS
T05908
Symbol
sharpin
Name
(RefSeq) sharpin isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04217
Necroptosis
xco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
114146400 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114146400 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114146400 (sharpin)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
114146400 (sharpin)
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
CATSPERB_Ig-like
ubiquitin
Ig-CFAP74_3rd
Motif
Other DBs
NCBI-GeneID:
114146400
NCBI-ProteinID:
XP_027876190
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Position
6:16534624..16540818
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AA seq
435 aa
AA seq
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MALSSGSWALPAPVPASSQQPACSGPSPAACCSTVLMSVRVSVSHSGIRPLCLPGAGSDS
LRLQLSMDPNLAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSSRCHEMRLAASPHDCI
RFNFRCDREAEAWSTVVISSLREAHRVANINACESDGKHDSEAAVDQRSSTSLTLCEELC
SELSKVIEAGDIQAASQHASALARQKAMLTIQPSQKNYTDGEISLSVVVEDASSSCCVTV
IVFPYMSVATLKQQVFLEYGFHPRVQRWVIGQCLCSDPRSLASYGVQKDGDTAYLYLISA
RQARITRQLFQQDLENSLTASALPPGSSLTSQVWRGYSTLPSKLPHNNQAETGGGNNKAG
DIKDVLDLEKLQLNDHSKANKMQQTEWACPSCTFINKPSRPGCEICATARPDVQSCIQQE
KGRREDRRESGLSRS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagctcgggtagctgggctctcccagccccggtgcctgcctcgtcccagcag
cctgcgtgcagcggccccagcccggctgcgtgctgcagcactgtcctgatgtcagtccgc
gtctcggtgtcccactccgggatcagacccctgtgcctacctggagcgggcagcgactct
ctgcggctgcagctcagcatggacccgaacctggccggagagttccgcctggcactgcga
gatacgagcggaaaccgcagtgtgttcattgcagagtttgacctgcgctcggtgcaatac
gaggtcaaatcctctcgctgccatgagatgcgtcttgctgcttcacctcacgactgcatc
cgcttcaacttccgctgcgaccgcgaggccgaggcctggtccaccgtggtgatatcgtca
ctgagagaggcgcacagagtggcaaacataaacgcctgtgaatcggatgggaaacacgac
tccgaagcagcggtggatcagaggagctcgacctctctgacgctctgtgaggagctgtgt
tcggagctctccaaagtgatcgaagcaggcgacattcaggctgcctcccagcacgcgtcc
gcactggctcgacaaaaagcgatgctgacgatacagccgtcccagaaaaactacacagat
ggagaaatcagtttatccgtggtggtggaagatgcctcttcttcttgttgcgtcacagtt
atagtctttccctacatgtctgtagccacactcaaacaacaggtctttctagagtatggt
ttccatcctcgtgtgcagcgctgggtgatcggtcagtgcctgtgctctgatccgcggtca
ctggcttcctacggagttcagaaagacggcgatacagcatacctgtacctgatctctgcc
agacaagctcgcattacacggcagctgttccagcaggacctggagaactccctgacggct
tcggcgctgccccccggaagcagcctcacctcccaggtctggaggggttacagcacactg
ccctcaaagcttccccacaacaaccaggcagaaacaggtggagggaataacaaagcagga
gacatcaaagatgtccttgatttggagaagctgcagctgaacgatcactccaaggccaat
aagatgcagcagacggagtgggcctgtccttcgtgcactttcatcaacaagccgtctcgc
ccgggctgcgagatctgtgccaccgccagacccgacgtgcagagctgcatccagcaggag
aaaggacggagagaggatcgcagagagtctggtttgagccgcagctga
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