Xiphophorus couchianus (Monterrey platyfish): 114146893
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Entry
114146893 CDS
T05908
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1-like
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114146893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114146893
Membrane trafficking [BR:
xco04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
114146893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
MTH865
DUF4054
Motif
Other DBs
NCBI-GeneID:
114146893
NCBI-ProteinID:
XP_027877131
LinkDB
All DBs
Position
6:19340201..19359913
Genome browser
AA seq
1464 aa
AA seq
DB search
MASSSSVGDKQLQRIIRDLHDAVMELTKEHTECNEPITDDSANLHKFFYKLEYLLQFDQK
EKTTFLGQRKDYWDYFCDCLIKIKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLA
DTLQQCFINQKVTSDWYYARSPFLKSYITAEIINDLYELNQIQFDVAARGYDLDADWPSF
ARRTLGGASQNLLWKPPSRCSSISSLVGSNSHSQVHECLQVPDVSHSLLGELGDLGEHSS
CNIAENLRIELDQSELRQQQLLVHVQELSKEAAELKGVVKDLQGQLSAQTSGNSASVLAR
FNSDTGNEDRLNQDQSQKDLQERLKATESKNMELLSKLDESLNERGQQTASYCDTAWKIQ
ELLERLKTAEEEKLEAKREAKETARDSEHLSQDLKLREEKLRNTEEKLDEVKARAHVERE
EAIARLEELQSAVGRIQGALTLKEKETGNLRAQLQDVQASLESRERQAEELRKRLQEEVE
QRCGMSYEELEGQMLELRKTLKTREKDLAAHSERIKHLEEQLEKLNADAESLCLQTDDSN
SVCSDTENHVDHKNQCNHLMEINKELLQTVRRTEANVSELTATRAALLDQLAALKASEKQ
LKGRVEAAAMNVEDREKKLLDENLQLEETLQKMLLQNDGLNAQVKKLQQENVELLNTHSS
MKSQLTTTQQEVDFLNAKADMLANNLTGSQRGQAELLEKLHEAEANLRAQTVSCSLLQAR
IGELERGTLHHEKGAAECNEKEQKLQDEHQASSLDTKEAPIRLVIAEAQLELNQKEVTRL
REEVVELRAQVLAANEDKLKAQAQQEVTAASREDLRILSDQLKAQVEELNRRHVDEILRS
REREEALMRERDVEAQARVGLAAEVTASREELDRLKLRCEALRLENSDSQEALHRANTEM
AELGVHVCMLTAQNEEARLRWEGLSSRLQDLEEAAAQEAERLNTCMEQLRQENQELCSQL
RDKEDLLLLRQKLQTEMSEAQQAAETGQKTRREEIQALRLQLSSQTTGHENQIQRVNEEL
EDVKLQLVNREEKTVRLENKLKQLEAENQRYCQQIGEKNIQMAESDNLILQKEDEIIHLK
ENLSRSEESLAAAQRACQEMAENLRRVKQDKQSFDLKTSAELDDLYRTKINLEERLVELI
REKDALWQKSDALEFEQKLRDEETERDVNYCLGCHTQFSWWLRKYNCRLCGRPFCYYCCS
NAVSTHQGGNRERCCSDCYNQHSAVVERHPQVEVTHNPPGSPFSRLLQTGRSMAGVAGGD
EGEKPDDAVFDIITEEEVSGVYDNDSFTTACSPGHSQQEAAQLNNSASTGDFPSEDAEDV
STAVQDAEICLLKSGELTLSVRLTVDDISGFGESSRELFIKSSCYSIVPVTMTSAGPTVS
WTFTSEPKSISFSVVYRESAETPLEQAKVLIPLTRCNSHKETIQGELKVRNPGEYTLIFD
NSFSRFISKKVLYHLSLAKPVVCD
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcttcatcggttggagataaacagctgcagaggataatcagagatctacac
gatgctgtgatggagttgactaaagaacacacggagtgtaatgaacctataacagatgac
agtgctaatctgcacaagttcttctataagcttgaataccttttgcagtttgaccagaaa
gagaagacaacctttcttggccaaagaaaagactactgggattacttttgcgactgcctg
attaagatcaaaggagctaacgatggcatccgttttgttaaatccatccctgagttgaag
acatcactgggaaaaggacgagccttcatccgctactcccttgtccaccagcgtcttgca
gacactttgcagcagtgtttcattaatcagaaggttacaagtgactggtattatgcccgg
agtcccttcctcaagtcctacatcacagctgaaataatcaacgacctttatgagctgaac
cagatccaatttgacgtggctgccagaggttacgaccttgatgcagattggccttccttt
gcaaggagaaccttaggaggtgcttcacaaaatctcttgtggaagcctccaagtcgctgt
tccagcatcagcagtctggtcggcagcaattcacattcccaggtgcatgagtgccttcag
gtcccagacgtaagtcacagtctgcttggagaacttggagatttgggagaacattcttcc
tgcaacattgctgaaaatctgcgcattgaacttgaccagtccgagctcagacagcagcag
cttctggtacatgtgcaggagttgagtaaggaggctgctgagctaaaaggcgtcgtcaaa
gaccttcaaggtcagttatcggctcagacgtccggcaattcagcatcggtccttgccagg
tttaactcagacaccggtaatgaagaccgactgaatcaggaccagagtcagaaggattta
caagagagactcaaagctaccgagagcaaaaacatggagctcctttctaaattggacgag
tctcttaatgaaaggggacaacaaacagccagctactgtgacacagcctggaaaatccaa
gaactcttagaaagacttaagactgcagaggaggagaagttggaggcaaaaagagaggca
aaggaaacagccagagactctgaacatttgtctcaggatctgaaactcagggaagaaaag
ttgaggaataccgaggagaagcttgatgaagtcaaagccagagcacacgttgaacgagag
gaggctattgctcggctggaggaactacagagtgcagttggtcgaattcagggggcgcta
actttgaaagagaaggagaccggaaacttgagagctcagctgcaggatgtgcaagcctct
ctggagagcagggagcgccaggcagaggaactacgaaaaaggttgcaagaagaggtagaa
caacgatgtggtatgagctacgaggaactggagggtcagatgttggagttaaggaaaact
ctaaaaactagagagaaagatctagctgctcactcagaaagaataaaacatttggaggaa
caattagagaaactaaatgctgatgcagagtctttgtgcctccaaactgatgatagtaat
tctgtctgtagtgatactgaaaatcatgtggaccacaaaaaccaatgcaatcatctaatg
gaaataaacaaagagcttctccaaacagtaaggaggactgaggcaaatgtttcagagttg
actgcaaccagggctgccctgctggaccagctggctgctttaaaagcctctgagaagcag
ttaaagggtagagtagaagctgcagcgatgaacgtggaagacagggagaagaagctttta
gatgaaaacctgcaacttgaagagactctccaaaagatgttactccagaatgatgggtta
aatgctcaagtcaaaaagttacagcaagaaaatgtagaacttttaaatactcattcctca
atgaagagtcaattaactacaactcaacaggaggtggactttctcaatgcaaaagctgac
atgctggcaaacaaccttactgggtcccaaagaggccaagcggagttgcttgaaaaactc
catgaagccgaggccaacctgagagcccagactgtgagctgttccctcctccaggctcga
ataggcgagctggagagagggaccttgcaccatgaaaaaggagcagcggaatgcaatgaa
aaagaacaaaagcttcaagatgaacatcaagcttcctcgttggacaccaaagaggcccca
atcaggctggtcatcgctgaggcccagttggagctcaaccaaaaggaggtgaccaggctc
cgagaagaggtggtggagctcagggcgcaagtgctggcggcaaacgaggacaagttgaag
gctcaggctcagcaggaggtgacggcggcctccagagaggatctacgcattttatcagat
cagctgaaggcgcaggtggaggagctgaaccggcggcacgtggatgagattctgagatct
cgagagcgtgaggaggctctcatgcgggagcgtgatgtggaggcacaggcccgtgtgggg
ctggccgcggaggtaacggcctctagagaggagctggacagactgaagctgcgctgtgaa
gcgttgcgtctggagaacagcgactcacaggaggcccttcacagagccaacacagaaatg
gcagaactcggcgtgcacgtctgcatgctgaccgctcaaaacgaggaggctcgactgcgc
tgggaaggcctgtcatcacgactacaggacctggaggaggcagcggcccaggaggcggag
aggctcaacacctgcatggagcaactgcgtcaggagaaccaagagctctgctctcaactc
cgtgacaaagaggatctgttgttgctcaggcagaaactccagacggagatgagcgaagcc
cagcaggcggcagagactggacagaagacgaggcgggaagagattcaggccctacggctc
cagctcagcagtcaaaccaccggccatgaaaaccagatccagagggtgaatgaggagttg
gaagatgtgaagctacagctagttaacagagaggagaaaacagtccgactggagaacaaa
ctcaagcagctggaggcggagaatcagagatattgccaacagattggggagaaaaacatc
cagatggccgagtcagacaatctcatcctgcagaaagaagatgagataatccatctgaaa
gaaaatttatcaaggtctgaggagagcctggctgcagctcagcgggcctgtcaggagatg
gctgaaaatctacggcgggtcaagcaggacaaacagagctttgatttaaagacatccgct
gaactcgatgatctttatcgtaccaaaatcaatttagaggaaagacttgtggagcttatc
agagaaaaagatgcattgtggcagaagtctgatgccctggagtttgagcagaagctccgt
gatgaggagactgaaagggacgtcaactactgtttgggttgtcacactcagttcagctgg
tggctgcgcaagtacaactgcaggctgtgtgggcgtcccttctgctactattgctgcagc
aacgcagtgagcacccatcagggtggcaacagagagcgctgctgttccgactgctacaac
cagcacagtgcagtggttgagcgccacccacaggtggaggtcactcacaacccaccgggg
tctccgttcagccgcttgctgcagactggccgatctatggctggcgttgcaggaggagat
gaaggtgaaaagccagatgacgctgtttttgacatcatcacagaagaggaagtcagcgga
gtttatgacaatgactcctttaccaccgcctgctctcctggacacagccagcaggaggca
gcacaactaaacaacagtgccagcacaggagactttccatcagaggatgctgaggacgtc
agcaccgccgtacaggatgcagagatctgcctgctgaagtctggggaactaacgctctct
gtccgcctaacggtggacgacatctcaggatttggggaaagctctcgggagctcttcatc
aagtcgagctgttacagcatcgtccccgttactatgacttctgctggacccaccgtgtcc
tggaccttcacctcggaaccaaagagcatctctttcagtgtggtttatagggagagcgca
gagactccactggagcaggccaaggttttaattcctctgactcgctgtaattcccacaaa
gagacgatacagggggagctgaaagtcaggaacccaggagaatacacgctcatctttgac
aactctttctccaggttcatttcgaagaaagtgctgtatcatctgagtcttgccaaacca
gttgtctgcgattaa
DBGET
integrated database retrieval system
