KEGG   Xiphophorus couchianus (Monterrey platyfish): 114147813
Entry
114147813         CDS       T05908                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114147813 (kdm6a)
Enzymes [BR:xco01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     114147813 (kdm6a)
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     114147813 (kdm6a)
   Histone demethylases
    114147813 (kdm6a)
SSDB
Motif
Pfam: JmjC KDM6_C-hel TPR_1 KDM6_GATAL TPR_2 TPR_17 TPR_8 TPR_16 TPR_12 TPR_11 TPR_9 TPR_19 TPR_CcmH_CycH TPR_7 RPN7 ANAPC8 ARM_TT21_C GCP_N_terminal ANAPC3
Other DBs
NCBI-GeneID: 114147813
NCBI-ProteinID: XP_027878254
LinkDB
Position
7:complement(3870227..3911102)
AA seq 1443 aa
MKSCGLSLTAAARSLGVASNDEEKMASGKATEIEEDFPKLTAQEKESLVGIDSSLFGFHG
LQEDGARTKALLLKAVSCYNGLILKAEGKVDPDVFCQLGHFNLLLEEYSKALSAYQRYFS
LQLDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYIDPTFSRAKEIHLRLGLMFKVNT
DYESSLKHFQLALIDSNLCTLSKAEIQFHIAHLYEIQKKHRAAKDAYESLLQMENLPAQV
KATTLQQLGWMHHTVEQLREKDSKGCYAIQCLQKSLEADPNSGQSWYLLGRCYSSIGKVQ
DAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAWMDLGTL
YESCGQLQDAMKCYINATRSKACLNTAALAQRIKLLQAQLCNLHPSSLQNKSKMLPCIEE
AWSLPIPAELTSRQGALNTAQAQQACKGEGGPSASSHSDPLASPAKKKRTASQVKGAADL
LANGSNQQQVPGWYLTPQKIQLLDHLRSNRASLTPPRQHMLEQLENQFSLMQQHQQQMRQ
QAAVGGQPRSSLPNGPSADHPHNPGLSHSSPVNHAAGRPPQTNGSCSSPSAGLPGHLDLK
NARAGLGGGGGASNGNVPYPQQNSLPHTCTATSQPSTTGSSTNTSPSHADDTWRSQPRNT
TTQGLQKGPGSHPAGPDGEPPFSSSSSPSQTSFSSSSVLNQVGLCSGPCTASSSASSLSP
TSPQSTPNHLSSPPHSATTSGVYTKDAATVAPSGGKTGSTVPAAVPLPGLEAAGGHHGGA
PCSPGSASRQGLTNHVQPRVQERSASPLQPASPAAGATLTSDNPQLSAFVKGKANATSNH
DDSNHGGSSSEKTNHVLPALHAKPEHSAASSPLSVAPVPSPCSADPHTTSGPSCLNSLSD
SNSQGPTLNGKSPEDSRSPQRKTPPAGLAPWSSVSIYPSSSDVLKACRNLGKNGLSTSSI
LLDRCPPPRPPGRPSPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPANPVTVIRGL
AGALKLDLGLFSTKTLVEANPEHLVEVRTQLAQPTDENWDPSGSRKMWRCESSRSHTTIL
KYAQYQASSFQESLREENEKKKEVEAEAASSDSGIRRRKGPLKHIKFGTNIDLSDDKKWK
QQLQELTKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNI
NIGPGDCEWFAVPESYWGVINDFCEKNNINFLMGSWWPNLEDLYENNVPVYRFIQRPGDL
VWLNTGTVHWVQAIGWCNNIAWNVGPLTAHQYKLAVERFEWNKLQSVKSIVPMIHLSWNM
ARNIKVSDHKLFEMIKYCLLRTLKQVQMQREILLAAGKELVWHGRTHSEPAHYCSICEVE
VFNLLFVSSESNSRKTYVVQCQDCARRASADLDSFVVLEQYKIEDLMQVYDQFTLASPLP
SSS
NT seq 4332 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggactatcgctcacggccgctgcccggagcctcggcgttgcttctaat
gacgaggagaaaatggcgtcgggaaaagcgactgaaatcgaagaggactttccgaagcta
acagcacaggaaaaggagagcctggtcggaattgacagttcactgtttggatttcatggg
cttcaagaagatggcgccagaacgaaggccttgctgttaaaggctgtgagctgctacaac
ggcctcatcctgaaagcagagggcaaggtggatcctgacgtcttctgccagctcggccac
ttcaacctcctgctggaggaatattcaaaagcattatctgcatatcagaggtacttcagt
ttacagttggactactggaagaatgctgcctttttatacggccttggaatggtttacttc
cattacaacgcatttcagtgggcaattaaggcgttccaagaggtgctttacatcgaccca
acgttttcccgagcgaaagaaattcatctgagactggggctcatgttcaaagtcaacaca
gactatgagtccagcttaaagcatttccagctggcattgatcgactctaatctctgcact
ttgtccaaagctgaaattcagttccacatcgctcatttgtatgaaatccagaagaaacac
agagcggcgaaagacgcgtatgagagtctgctgcagatggaaaaccttcctgctcaggtg
aaggccaccacactgcagcaactgggctggatgcatcacactgtggagcagctgagggag
aaagactccaagggctgctacgccatccagtgtctgcagaagtctttagaagcagacccc
aactccggccagtcctggtaccttctcggcaggtgctactccagtatcggaaaggtgcag
gatgccttcatctcctaccgccagtccattgataagtcggaggccagcgctgacacctgg
tgctccataggtgtgctgtaccagcagcagaaccagcccatggacgctctgcaggcctac
atctgcgccgtccagctggaccacagccacgccgccgcctggatggacctgggtacgctg
tacgagtcctgcggccagctgcaagacgccatgaagtgctacatcaacgccacgcgcagc
aaagcgtgcctcaacaccgccgctctcgcgcaacgcatcaaactgctgcaggctcagttg
tgtaaccttcacccaagtagtctgcagaataagagtaaaatgcttccttgtattgaggag
gcgtggagccttcccattcctgccgagctcacgtccaggcagggggccttgaacacagca
caggcgcagcaggcttgtaaaggggagggaggcccgtccgccagcagccacagcgacccg
ctggccagtcctgctaaaaagaaacgcaccgccagccaggtcaagggtgctgccgacttg
ttggcaaacggatccaatcagcagcaggtccccggctggtatctgacgccacagaagatc
cagctgttggatcatttacggagcaaccgggccagcctcacgcccccccggcagcacatg
ctggagcagctggagaaccagttctccctcatgcagcagcatcagcagcagatgaggcag
caggctgcagtgggcggccagccgcggtccagcctccccaacggcccgtcagcggaccac
cctcacaacccgggactgtcccactcctctcctgtcaatcatgcagccggtcgacccccc
cagaccaacggctcctgttcgagtccttcggcgggtctgccgggacacctggaccttaaa
aacgccagggcggggctgggcggcggtggtggtgcgagcaacggaaacgtgccttacccg
cagcagaactctctacctcacacctgcaccgccaccagtcagcccagcaccaccggcagc
agcactaacaccagtcccagtcacgcggacgatacctggaggagccaaccacgcaacact
accactcaggggcttcaaaaaggtccaggttcccatccggcaggtcctgatggagaaccc
cctttctcctcctcttcctccccgtctcagacctccttctcctcctccagtgttctgaat
caggttggactttgctccgggccctgcactgcctcctcctcagcctcttccctgtccccc
acttccccacagtccacgcccaaccacttgtcttcgcctccccactccgccactacctca
ggggtctataccaaagacgcggcgacggtggcgccttccggggggaaaaccggcagcacc
gtccccgccgccgttccgctgccaggtcttgaggcggccggcgggcatcacggaggagcg
ccatgcagccctggctccgcctcccgtcaaggattgactaatcacgtccagccgcgggtg
caggagcgctccgccagcccgctgcagcccgcctcgccggccgctggtgcaacgctcact
tcagacaatcctcaactctcagcctttgtaaagggaaaagccaacgctaccagtaaccac
gacgacagtaatcacggagggtcttcctcagagaaaacaaaccacgtcctcccagctctc
cacgccaagccggagcactcggcggcttcctccccgctgtcggtcgccccggtgccctcg
ccgtgctcggcggacccccacaccaccagcggcccctcctgccttaacagcctgtccgac
tccaacagccaggggcccacgctcaacgggaagagcccggaggactcccggagcccgcag
agaaagacgccgcctgctgggctggctccgtggtcgtcggtctccatctaccccagctcc
agtgatgtgctgaaagcttgcagaaacctggggaagaacggcctgtcgaccagcagcatc
ctcctggaccgttgccccccgccgcgcccgcccggccgaccctcacccccactgccaaag
gacaagctcaaccccccgacgcccagtatttatctagagaacaagagggatgctttcttc
ccccccctccaccagttctgcaccaaccctgccaacccagtaaccgtcatcaggggcctg
gctggggccctcaaactggacctgggcctgttctccacaaagacgctggtggaggccaac
cccgagcacctggtggaggtgcggacccagctggctcagcccaccgacgagaactgggac
ccgagcgggagcaggaagatgtggcgctgcgagagcagccgctcccacaccaccatcctg
aagtacgcccagtaccaggcctcgtccttccaggagtcgctgcgggaagagaatgagaag
aagaaagaggtggaagcagaggcagcttcctcagacagtgggatccggcgaaggaaaggc
cctctaaagcacataaagtttggcaccaacatcgacctctctgacgacaaaaagtggaag
cagcagctgcaggagctgaccaagctgccggccttcgccagggtggtgtcagccgggaac
ctgctgagccacgtgggccacaccatcctgggcatgaacaccgtccagctgtacatgaag
gtgccagggagccggactccaggtcaccaagagaacaacaacttctgctcggtcaacatc
aacattggtcctggcgactgtgaatggttcgctgtgcctgagtcctactggggcgtcatc
aatgacttctgtgaaaagaacaacatcaacttcttgatgggctcctggtggcccaacctg
gaggacctgtacgagaacaacgttccagtgtaccgcttcatccagaggcccggggacctg
gtgtggctcaacactggcaccgttcactgggtccaggccatcggctggtgcaacaacatc
gcctggaacgtgggacccctcacagcccatcagtacaagctggcagtggagcgcttcgag
tggaacaagctgcagagcgtcaagtccatcgttcccatgatccacctctcctggaacatg
gcgaggaacatcaaagtgtcagaccacaagctcttcgagatgatcaagtactgcctgctg
cggacgctgaagcaagttcagatgcagagggagatactgctggctgcagggaaggagctg
gtgtggcacggccggacccacagcgagccggcccactactgcagcatctgtgaagtggag
gtattcaacctgctgtttgtgagcagcgagagcaacagcaggaagacatacgtggttcag
tgccaggactgcgccaggcgggccagcgctgacctggacagcttcgtggttctggagcag
tacaagatcgaggacctgatgcaggtttacgaccagttcacactggccagccccctgcct
tcctcttcttga

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