Xiphophorus couchianus (Monterrey platyfish): 114148208
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Entry
114148208 CDS
T05908
Name
(RefSeq) U8 snoRNA-decapping enzyme-like isoform X1
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00230
Purine metabolism
xco01100
Metabolic pathways
xco01232
Nucleotide metabolism
xco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
114148208
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114148208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114148208
Enzymes [BR:
xco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
114148208
3.6.1.64 inosine diphosphate phosphatase
114148208
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
114148208
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Paralog
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
BChl_A
Motif
Other DBs
NCBI-GeneID:
114148208
NCBI-ProteinID:
XP_027879144
LinkDB
All DBs
Position
1:complement(3579405..3583950)
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AA seq
245 aa
AA seq
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MIPPKYRSFSRLVSCLQSRLLAQHRKKMASGQMSRDEALECTRCRHACHVMLYSETATQL
FGRIPIWYIVLMQMRFDGLLGFPGGFVNPSEETLEAGLTRELLEELGVAVPVSTEDHVES
CFSPPRSGTCSSSSRLILHFYVKKIEEEQIREIEKAAASTAADHGLEVLGMVRVPLYTTK
SGGGLSCFLSHSFIGVARSQLVNSLLRLHLVSPGDLREALRGSQRRHAESAQNLQAVLKL
TGEQP
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcctaaatacagaagtttctccaggctggtcagctgcttgcagtcaagactt
ttagcccagcacagaaagaagatggcaagtggccagatgtcgagggacgaagccctggaa
tgcacccgctgcaggcatgcatgccatgtgatgctctactctgagacggcaactcagctg
tttggcaggattcccatctggtacattgtactgatgcagatgcgctttgatggactactg
ggcttccctggtggtttcgttaatccctcggaggaaaccctggaggcggggcttaccagg
gaattactggaggagttgggcgtggctgtgccagtttctacggaagaccacgtggagtct
tgttttagccctcctcgttcaggcacctgttcctcttcctcccgcctcatccttcacttc
tacgtgaagaagatagaagaggagcagattcgggagatagagaaagcagccgcgtccacc
gcagccgatcacggtctggaggtgctgggaatggtccgagtccctctttacaccacaaaa
tccggcggaggcctctcatgctttttgtcgcactctttcattggcgttgctcgctcccag
ctggtgaactctctgctccgcctccacctggtgtcccctggggacctccgggaagctctc
aggggctcccagaggaggcacgcggagtccgcgcagaacctgcaggcggtccttaaactg
acaggggagcaaccctaa
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