KEGG   Xiphophorus couchianus (Monterrey platyfish): 114149281
Entry
114149281         CDS       T05908                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    114149281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114149281
   04121 Ubiquitin system [BR:xco04121]
    114149281
   03036 Chromosome and associated proteins [BR:xco03036]
    114149281
Enzymes [BR:xco01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     114149281
Transcription factors [BR:xco03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    114149281
Ubiquitin system [BR:xco04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     114149281
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114149281
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     114149281
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box Cupin_8 JmjC
Other DBs
NCBI-GeneID: 114149281
NCBI-ProteinID: XP_027880795
LinkDB
Position
8:complement(14597918..14620173)
AA seq 1390 aa
MAQSAETCAETGRRLRSICRRMYDENEDLSDVEEIVNIRGFSVEEKLASDCYNSEFVHLM
EGRDFTYEYVQREALRIPLIFKEKDELGIRMPDSEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLEHLIKRPTVVDQVDWVDNMWPPDL
KHSQTEATNIISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDVFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPVDTLVFGG
NILHSFNIPMQFTIHEIENRTKVHSKFRFPFYYEMCWYVLERYLHCLTKKSYFTHEIHKE
SVDYETKIKTESPSSDSRGQDMNEDSCGPVVTDGNGEKTERPSGDGPCSPDIIKGSLLKA
ALSVDSEDSCNPCPASLDFPKTPSDSPGSEAQSKWTHLTQHELIGLRTLVEKLESLPENK
KCVPVGIESPQALLDDIKVVLKEHADDDPKLAITGVPVVLWPKKVLKPRPPNRPKPKMAA
SPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMR
QCIAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKVKDSSGLV
NDELPNCWECPKCNHAGKTGKATKQKRGPGFKYASNLPGSLLKEPRLNRDSKDEPESLPP
PPLPVVMATTPVTPLMTSSAVKRKAEREVTLKKNDEEPPKKRPPLLALDSLPRTRLEDNP
LRKKRKLFDTNDEPIMLKKKKKLLKADDQFSLKPLQQIKTENDHREEDEGHWDHEEDILS
LNQMHFKRKSQYGDEGQDEDSEEEEAAAKERDDKTKALVSPLLRTSSAREGDHSSSNSPR
AGPSSETGDGQDKSSGPLKARHQRQRLPNKGPSKELSQEILKMEDSLSNQKHSAEKMENN
GHYRRPFKNEDFIANQNCKPIKTEETQNRRAPKLEDSVASYHRQPLKTEDCSSNQNHSPV
KPEPGSEADEQKPRWPLSNGSSDLGDWLRHRGREVNGMPHGYSPLSWNRSVPITPICPRP
LPRRSPPKCVQMERHVIRPPPISPPPDRLPLNDGEAHVMRREAWMKVFSHLPHRDLCVCM
RVCRAWNRWCCDKTLWKQISLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQLSWLIN
RLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQL
DNRSKLRHVEELRLAGLDITDTTLCLIIRYMPLLSKLDLSYCNHVTDQSVNILTAAGTTT
RDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMSVSVQFEL
IEDKLLQKIS
NT seq 4173 nt   +upstreamnt  +downstreamnt
atggcccagtccgcggagacgtgtgctgaaactggacggaggctgcgctccatctgccgg
aggatgtacgacgagaacgaggatctatctgacgttgaagaaattgtaaacattagaggt
ttcagcgtggaggaaaagcttgccagtgactgctataattcagagtttgttcacttaatg
gagggcagagacttcacttatgaatatgtgcaaagggaggccctcaggataccacttatt
tttaaagagaaagatgaattagggatcagaatgcctgactctgaatttacagtcagtgaa
ataaaaggattagttggcagtcgcaggtctgtggatgtcatggacgtgagcactcaaaaa
ggctcggaaatgagtatggctcagtttgtccgttattacgagaccccggaggaagagcgc
gacaaactctttaatgtcatcagcttagagttcagccacactaagctggagcatctcatc
aaacggcccacagtggtggatcaggttgactgggtggacaacatgtggcctcctgatcta
aagcacagccaaacagaagccaccaacattatttcagaaatgaagtaccccaaagtgcaa
aggtactgtttgatgagtgtaaagggctgctatacagactttcacattgatttcggagga
acttcagtttggtatcatgtattcaagggacaaaaagtattctggcttgtgcctccaacc
ccacataaccttgcactgtatgaggactgggtcctttcaggcaagcagagtgacgtcttc
ctgggagacagagctgatggatgccagagagtggagttgaaacaaggatacaccttcttc
atcccatctggttggatccatgctgtttacactcctgtagacacactagtttttggaggg
aacattctgcacagctttaacatccccatgcagttcactatccacgagatagaaaacagg
acaaaggttcattccaaattccgcttcccattttactacgagatgtgctggtatgtcctg
gagcgatacctgcactgcctgaccaaaaagtcctactttactcacgagatccataaagag
tctgtcgactatgagacaaagataaaaacagagagtccgtcgtcagactccaggggccag
gacatgaatgaggactcctgtggacctgtagttactgacggcaacggtgaaaaaactgaa
agaccctctggagatggcccttgctcgcctgacatcatcaagggctcactgctcaaagct
gctttatctgtcgattcggaggacagctgtaatccttgcccagcctctctagacttcccc
aaaaccccctcggattctccaggttctgaggctcagagcaagtggactcacctgacacag
catgagctgatcgggctcaggacactggtggagaaactggaatcactccctgagaataaa
aaatgtgttccggtgggaatagagagccctcaggccctcctagatgacatcaaggttgtc
ctgaaggaacatgctgatgatgacccaaaattagcaatcaccggggttcctgttgtgtta
tggcctaagaaagtgttaaagccccggcctcccaaccggccgaaacctaagatggcagcg
tctcctgcatcagcagtcaagctgtcggccagccggggaacgtctggtgccaggagaaga
aggacgcgttgccgaaagtgcgaggcgtgtctgcggacggagtgcggagagtgccacttc
tgtaaagacatgaagaagtttggagggccggggcgaatgaagcagtcttgcatcatgagg
cagtgcattgctccggtcctgccccacacagcagtgtgtcttgtctgtggagaagctgga
aaggaagacacagtggaggacgaagaggagaaattcaacctgatgctcatggagtgctcc
atctgtaatgagattgttcatccgaactgtctcaaggttaaagattcgagtggattagtc
aatgatgagctgccaaactgttgggagtgtccaaagtgtaaccatgcaggaaaaactggg
aaagccacaaagcaaaaaagggggccaggattcaagtacgcatcgaaccttcctggctcc
cttctcaaagaaccgcgcttaaaccgagactcaaaggacgagcccgagtcgctgccccca
ccgccgctgccggtggtgatggcaacgacacctgttaccccactgatgacctcgtctgct
gtgaaaagaaaagcggagcgggaagtaaccttgaagaagaacgacgaggagcctccaaag
aaacgcccgcccctgctagctctggatagcttaccacgaacacggcttgaagataatcca
ttaaggaagaaaaggaaactgtttgatacgaatgatgaacccattatgttgaaaaagaag
aaaaagcttttaaaagcagatgatcaatttagtctgaagcctttgcaacaaatcaagaca
gagaacgatcacagggaggaagatgagggacactgggatcatgaagaagatattttatcc
ttgaaccaaatgcattttaagaggaagagtcagtatggcgatgaaggccaggatgaggac
tcagaggaagaggaggctgcagctaaagagagagatgacaaaaccaaggcactcgtgagt
cccctgctaagaacgtcctcagccagagaaggtgaccactcatcctccaactctcccaga
gccggaccgagcagcgagacaggagatggccaggataagagctctggtccgctcaaagcc
cgccatcagcgccaacgtcttccaaacaaaggaccgagcaaagagttaagccaagagatc
ctcaagatggaggattctctgagcaaccagaagcacagcgcggagaagatggagaacaac
ggtcattatcgcaggccattcaaaaatgaagattttatagccaatcagaactgcaaacct
ataaaaactgaagagactcagaatcgtagagctcctaagctggaggacagtgtggccagc
taccacagacagccgctgaaaaccgaggactgctcgagcaaccagaatcacagcccagta
aagccagaaccagggagcgaagcggatgagcagaaaccgagatggccgctcagcaacggc
agcagtgacctgggtgactggctgcgacacaggggtcgggaggtcaatgggatgccgcac
ggttactctcctcttagctggaacagaagcgtgccgattacaccgatatgtccgcgtccg
ctcccccgccggtcgcctccgaagtgcgttcaaatggagcgccacgtcattcgaccccct
cccatcagtcccccacctgacagactgccgctgaacgacggggaagcccacgtgatgcgt
cgggaggcgtggatgaaagtgttcagtcacctccctcacagggatctctgcgtctgcatg
cgtgtctgcagagcgtggaacagatggtgctgcgataaaaccctgtggaagcaaatcagc
ctgaaccgctgcaagtcgataacgcctctgatgctgagcggcatcatccggaggcagccg
gtagctctggacctcagctggaccaacatctccaaaaaacagctcagctggctcatcaac
aggcttcctggtttgcgcgtgttgctcctgtcaggttgctcttgggtcgccgtctcggcc
ctgtgcacctccagctgtcctctgctgcgaacgctggacgttcagtgggtcgagggcctg
aaagacgcccagatgagagacttactgtcgcccccgacagataacaggccaggtcagctg
gataaccggagtaagctgcgtcacgtggaggagctccggctggctggactggacatcacc
gacacgactctgtgcctcatcatccgttacatgcctctgttatcgaagctggacctcagc
tactgcaaccatgtcactgaccagtctgtgaacatcctgaccgctgcagggacaaccacc
agagactcgctcactgacatcaacctgtcagtctgtaacagggtcaccgaccagtcgctg
acctatttcaagcgctgtggaagcatctgtcacatcgacttgcgctactgcaaacaggtg
accaaggaggggtgtgaccagttcatcgctgagatgtcagtcagcgttcagtttgagcta
atagaggacaaactgctgcagaagatcagctag

DBGET integrated database retrieval system