Xiphophorus couchianus (Monterrey platyfish): 114149417
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Entry
114149417 CDS
T05908
Name
(RefSeq) tumor necrosis factor receptor superfamily member 10B-like
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04060
Cytokine-cytokine receptor interaction
xco04115
p53 signaling pathway
xco04210
Apoptosis
xco04217
Necroptosis
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
114149417
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
114149417
04217 Necroptosis
114149417
04115 p53 signaling pathway
114149417
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114149417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xco04050
]
114149417
04090 CD molecules [BR:
xco04090
]
114149417
Cytokine receptors [BR:
xco04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
114149417
CD molecules [BR:
xco04090
]
Proteins
114149417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
LAX
Collectrin
DUF7535
KIAA1549
Motif
Other DBs
NCBI-GeneID:
114149417
NCBI-ProteinID:
XP_027881061
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All DBs
Position
8:23334259..23367768
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AA seq
445 aa
AA seq
DB search
MNFGPVVGKLFVVVAALIVCHAAELPAPQWSGEEYRNLTLRRLRTCVENEQYPHQGLCCV
NCKEGTFVQKPCEGDLEEGTCVSCEHGQTYTEHPNGMNRCLPCTHCRPDERVITPCTTTT
DTKCECKPGTFCVPDQACEVCKRCAKCKAGEEEVKNCTPFSNTVCRKRDPSPTETVTPRS
PPVPDPPTNTWFLVLMVLICIVVIVVFAIILWFLRKQHSCDVPWFKSSCESSEIVKIPID
ESGATAEEKQNNQNAGLEGEEPRPESRPLLQETQPVMTKACPPLEDEDRGLGDSLPNTTS
SSQTSLSALPTAASTGSTPHHSPAGFRQLPSDTDDPLGHRLLPLLGSEKSLRKSFDLFDE
YLDVRIHNKFFRLIGISDNHIRIAESGAPGDKVYELLKNWMQRQGLKADINDLLEALLSM
DQRRSAECIAHAALRRGYYKHADTP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcggtccggtggtcggaaaactttttgtggtcgtggcagcgctgattgtttgc
cacgcggcagaactcccggcccctcagtggtctggagaggagtacagaaacctcactctg
agacgactcaggacatgtgtggagaatgagcagtacccccaccaaggactctgctgtgtg
aactgcaaggagggaacgtttgtgcagaagccatgtgaaggtgatctggaggaaggaaca
tgcgtgtcctgtgaacacgggcagacgtacaccgagcatccaaatgggatgaaccgctgt
ctgccctgtacacactgtcgccctgacgaaagagtaatcactccctgcacgaccacaacg
gacaccaagtgcgagtgcaagcccggcaccttctgcgttcctgaccaggcctgtgaagtc
tgcaaacgctgtgccaagtgcaaagccggcgaggaggaggtgaagaattgcacgcccttt
tccaacacagtgtgccgaaaacgagacccgtccccgaccgaaacggtaacgcctcggtct
cctccggttcccgacccgccaacaaacacctggtttcttgtattaatggtcttgatctgc
atcgtggtcattgtcgtctttgccattattttgtggttcctacggaaacagcactcatgc
gacgtaccatggttcaaaagctcttgtgaatcgagcgaaatcgtaaagattcccatcgat
gagagtggagccactgcggaggagaagcagaacaaccagaacgcggggctggagggcgag
gagccccgcccggagtcgcggcccctgctgcaggagacacaacccgtgatgaccaaggcc
tgcccgcctctggaggacgaggatcgcggactgggcgacagtttgcccaacaccaccagc
tcgtcccagacgagcctgtcggcgctgcccaccgctgcctccactggcagcaccccgcac
cacagccccgccggcttcagacagttgccttcagacacggatgaccctcttggacatcga
ttgctgccactgctcgggtcggagaagtccctcaggaagagcttcgacttattcgacgaa
tacctggacgtgcggatccacaacaagttcttccgactgatcggcatcagtgacaaccac
attcggatcgccgagagcggcgcccccggcgacaaagtgtacgaactgctgaagaactgg
atgcagaggcaggggctgaaggccgacatcaacgacctgctggaggcgctgctgagcatg
gaccagcggcgctcggccgagtgcatcgcccacgccgccctgaggagaggctactacaag
cacgccgacaccccctga
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