Xiphophorus couchianus (Monterrey platyfish): 114152677
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Entry
114152677 CDS
T05908
Name
(RefSeq) LOW QUALITY PROTEIN: matrix metalloproteinase-18-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114152677
Peptidases and inhibitors [BR:
xco01002
]
Metallo peptidases
Family M10
114152677
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Astacin
Reprolysin_3
DUF4953
Reprolysin_5
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
114152677
NCBI-ProteinID:
XP_027886423
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All DBs
Position
11:complement(26998307..27002435)
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AA seq
510 aa
AA seq
DB search
MKSFGVYVLLSFAAAVCCVPVSKVTVQDESFAKGYLKRFFNLTXEKEPLSRKGANPMSKK
LSEMQKFFGLQITGTLDNDTVEVMKKPRCGVADENIARYSTFGDGLKWKKNTITYRFVNY
TPDMSQAEVDDSIRRALEVWAKVTPLRFTKLTSGTADIMISFARRSHGDNYPFDGPGSTL
AHAFAPSPDIGGDAHFDDDETFTFRSSKGYVLFLVAAHEFGHSLGLSHSDNRAALMYPLY
SYKDPNTFVLPQDDVRGIQSLYGSNPSGGTAATTTGSNPSGGTAATTTGSNPSGGTAATT
TGSKPSGDPRATTTQAPTIPDVCSSPVEFDAVTTLKGEMFFFKDSYLWHSSSQSSTPQKS
LISSFWPNAPTSVDAAYENPRTGNVLLFKGSNVWAFSGTQPVPGYPKSLSEFGLPSFLTK
VDAAFQDARSGKTYLFWGGYFYLTFDESRKAVESFSWVRQTFSGMSNKVAAATEKEGYAH
IYSGLYMYMYDLLSGKLLRVLKNTYLLGCN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttttggtgtctacgtgctactaagctttgcagccgcagtctgctgtgtgcct
gtctccaaagtaacagtgcaagatgaaagctttgcaaagggttacctgaagagattcttc
aacctgacannggagaaagagccgttatctcggaaaggagccaacccaatgagcaagaag
ctgagtgagatgcagaaattctttggtctccagataacggggactctggataacgacacc
gtggaggtgatgaagaagccccgctgtggagtcgcagatgaaaacattgcccgatattcg
acttttggagacggcctcaaatggaaaaaaaacaccatcacatacaggtttgtgaattac
accccagacatgtctcaggcagaggtggatgactccattcgaagagctctagaggtttgg
gccaaagtcactcctctgaggttcacaaaacttaccagtggcacggctgacatcatgatc
tcctttgctcgccgatcacacggtgataattacccctttgacgggcctggcagtactctt
gcccacgcctttgctccttctcctgacatcggaggagacgctcactttgacgacgatgag
accttcacatttcgttcaagcaaaggctacgtcctcttcctggttgctgcccatgagttc
ggccactctctgggcttgtcccactctgacaatcgcgctgctctcatgtaccctctgtac
tcttacaaagaccccaacacctttgttctgccccaagatgatgtcagaggcatccagtcg
ctttatggttcaaatccttctggaggtaccgcagcaactacaacaggttcaaatccttct
ggaggtaccgcagcaactacaacaggttcaaatccttctggaggtaccgcagcaactaca
acaggttcaaaaccttctggagatcccagagcaactacaactcaggctcccaccatccct
gatgtctgcagctcacctgtggagtttgatgcggtcaccaccttgaaaggagaaatgttt
ttcttcaaggacagttacttgtggcacagcagctcccagagcagcacgccccaaaaaagt
cttatctcaagcttctggcccaacgccccaacaagcgttgatgctgcttacgagaaccca
aggactggcaacgtcttacttttcaaaggttctaacgtatgggccttctctggaacccag
ccggtaccgggctacccaaagtccctctctgaattcggtctgccaagttttttgacaaaa
gtcgacgctgcttttcaagatgctcggtctggaaaaacctatctgttctgggggggctac
ttctacttaacttttgatgaaagcagaaaggctgtggaatcattttcctgggtgagacag
acgttttccggaatgagcaacaaggtggcagcagccaccgagaaagaaggttatgctcac
atctacagtggcctctacatgtacatgtatgacctgttgagcgggaagttgctacgtgtg
ctgaagaacacctacctgcttggctgtaattag
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