Xiphophorus couchianus (Monterrey platyfish): 114153224
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Entry
114153224 CDS
T05908
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04110
Cell cycle
xco04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114153224 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114153224 (rb1)
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114153224 (rb1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
114153224 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
114153224
NCBI-ProteinID:
XP_027887423
LinkDB
All DBs
Position
11:complement(19856925..19881649)
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AA seq
912 aa
AA seq
DB search
MPPKKRHSGTTQNKEPKPSADSASPPDKQDSPELSEKKHREKHAEFVSLCKSLHVSDLVC
DRAWTLWESVRESMDKVPGSQQRLWGACLFVIITDMDISSFTVTQVLKAVSLNLKQFLAL
VRQLDVNLDTISMKVNSALTRLEKKYDVMLALYQRFEKTCKNIFVLTSDGRERETMRTCW
TMFLLAKGRALQMEDDLVISFQLLLCTLELFIKRCSSDQLQSLYQSAISKVLSPPTRTSR
RNQSKAKSRPSEPEVDAQLLETLCKDNECNFEEVKNVYQTSFLAFLDSTDLSRSIDFPQV
NDVNQQYEELYLKSRDIDGRLFFDGDETVLPPKFEISKVERTPKKNQPEEDGPMIPPQTP
IRAAMTSIRMLRGDLPSNGDQPSTTLTTYFKNCTVDPTQDVQKRLETLGQAFSQKFGEAV
GPHCVVYGRQRFALGVRLYYKVMEAMLKSEEKRLSVQNFSKLLNDSTFHTSLLACSLEVV
MATYEESSFKNGGSDQTGTNLCFPWILNVLNLSAFDFYKVIESFIKAEPTLSKDIIKHLE
TCENLIMERIAWRTGSPLFELLKQEHASAAAEPVETPASFSQPLQHSHTAADLYLTPTRP
ASRVLPPDSPATPPQQPTASQSTSQAPCQAPRQPKSNSLSLFYKKLYRLAYTRLKTLCSY
LLSSHPELEPIIWTLFQYTLQHEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKSIVSAY
KNMTNTNQETFKNVLIIEGHYDSIIVFYNQVFMQKLKTNILQHASIRPPPLSPIPQIPRS
PYKLPNSPLRVPGSNNIYISPLRSSRMSPGIMTPRSRMLVSIGESFGLGNRFQKINQMVN
SERSHKRTMDQSAAIKPLKKLRFDVDGQDEADGSKPGGDSTLIQKLTEMSSTWSRMHEQK
MKEEPETRDEPQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaaaaaacgccactctgggacgacacaaaacaaggagccgaagcccagcgct
gacagcgcttctcctccagacaagcaggatagcccagagttatctgagaaaaaacacaga
gaaaagcacgctgagtttgtgagtctgtgtaagagccttcatgtttcagacctggtgtgt
gaccgagcctggaccctgtgggaatccgttcgggaatccatggataaagtccctggcagt
cagcaaagactttggggcgcttgtctgtttgtgatcattacagacatggatattagtagc
tttactgtcacccaagttttgaaagctgtcagtctgaatttgaagcagtttttggctctg
gtgagacaactggatgttaacctggatacaattagcatgaaggtcaactcagcactgaca
cgactggagaagaagtacgacgtaatgctggctctttaccaaagatttgagaaaacgtgc
aagaacatctttgttctgacatctgatggcagggagagagagaccatgcggacctgctgg
acaatgtttcttttggcaaaaggaagagctttgcagatggaggatgacctggtcatatcc
ttccagttgctgctttgcacgctggagttgtttatcaagcgctgctcttcagaccagtta
cagtctttatatcaatcggccattagcaaggtcctgagcccaccgacacgaacatctcgc
cgcaaccagagcaaagccaagtcccgaccttcagaaccagaggttgatgcgcagcttctt
gaaaccttgtgcaaagacaacgaatgcaatttcgaagaggtgaagaacgtgtaccagacc
agcttcttggcttttctggactcgacggatctttcgagatccatcgactttcctcaggtg
aatgatgtcaaccaacagtatgaagagctctacctcaagagcagagacatcgatggacgt
ctgtttttcgacggggatgagaccgttcttcctcctaaattcgagatatcaaaggtggag
agaactccaaagaagaaccagccagaggaagatgggccgatgatccctcctcagactccg
atcagagctgccatgacctctatccggatgctcagaggagatcttccctccaacggggat
caaccttctactacactgaccacatatttcaaaaattgcactgtggacccgacgcaggat
gtgcagaaacgtttagagacacttggtcaggcttttagccagaagtttggcgaagcagtg
ggacctcactgtgttgtgtatggcaggcagagatttgcccttggcgtcagattatactac
aaagtaatggaggctatgctgaaatcggaagagaagcgtctctctgtgcaaaatttcagt
aaactcctcaatgactccacgtttcacacatcactcctggcctgttctttggaggtcgtc
atggcaacatatgaagagagtagtttcaagaacggaggaagtgaccaaactggaacgaac
ttgtgcttcccctggattctgaacgtcctcaacctctccgcctttgacttctacaaagtg
atcgagagcttcatcaaggctgaaccgacactgagcaaagacatcatcaaacatctggag
acctgcgagaacctcatcatggagaggattgcatggaggacgggctctccgctgtttgag
cttctgaaacaggagcatgcgagcgcagcagcggagccggtggagactccagccagtttc
agccagccgctgcagcacagccacaccgccgcggacctatatctcacaccaacacgccca
gcatcgcgggtcttgcctcctgattccccggccacgccgccccagcagcccactgcttct
cagtccacctcccaggcgccctgccaagctccgaggcagccaaagtctaactccctcagt
ctcttctataaaaaattgtaccgcctggcctatacaaggctaaagactctctgctcatat
ctgctgtcctctcaccctgaactggagcccataatatggaccctgtttcagtacaccctg
cagcatgagtatgagctgatgagagaccgccacctggaccagctgatgatgtcggccatg
tacgccatatgcaaagtgaagagtgtcgatctgcgcttcaagtccatcgtttcggcctac
aagaacatgacaaacaccaaccaggagacctttaagaacgtgctgatcatcgagggccac
tatgactccatcattgtcttctacaaccaagtgttcatgcagaagttaaaaacgaatatc
ctgcaacatgcgtccatcaggccgcctcccctttctccaattccacaaattcctcgcagc
ccatacaagttacccaactctcctctgcgtgtgcctgggagcaacaacatctacatctcc
cctttgagaagctcccgcatgtcgccgggtatcatgactcctcgctccagaatgttggtg
tccattggtgaatcatttgggctgggcaatcgcttccagaagatcaaccaaatggtcaac
agcgaacgttcccacaagagaacgatggaccaaagcgccgccatcaagcctctgaagaag
ctgcgctttgacgtggacgggcaggatgaagcagacggcagcaaacctggaggggattcg
accctgattcagaaacttacagagatgagctccacttggagtcgcatgcatgagcagaag
atgaaggaggagcccgaaacgagggacgagccacagtaa
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