KEGG   Xiphophorus couchianus (Monterrey platyfish): 114155101
Entry
114155101         CDS       T05908                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010  MAPK signaling pathway
xco04137  Mitophagy - animal
xco04141  Protein processing in endoplasmic reticulum
xco04210  Apoptosis
xco04217  Necroptosis
xco04621  NOD-like receptor signaling pathway
xco04622  RIG-I-like receptor signaling pathway
xco04920  Adipocytokine signaling pathway
xco05132  Salmonella infection
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114155101
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    114155101
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    114155101
  09143 Cell growth and death
   04210 Apoptosis
    114155101
   04217 Necroptosis
    114155101
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    114155101
   04622 RIG-I-like receptor signaling pathway
    114155101
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    114155101
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    114155101
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    114155101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114155101
   04121 Ubiquitin system [BR:xco04121]
    114155101
Enzymes [BR:xco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114155101
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     114155101
Ubiquitin system [BR:xco04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    114155101
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 Sina_ZnF zf-RING_4 zf-C3HC4_2 zf-RING_5 zf-C3HC4_4 zf-RING_6 zf-C3HC4_5 TRAFD1-XIAF1_ZnF MATH zf_C2HC_14
Other DBs
NCBI-GeneID: 114155101
NCBI-ProteinID: XP_027890596
LinkDB
Position
12:complement(31095835..31112081)
AA seq 568 aa
MAAQEPSPPSSLEGNKPGFPKKILANNLEDKHLCNSCQKILRRPLQAQCGHRFCSFCFNK
LVSSGPQKCSACIKEELFEEPTSILKPGGAFPDNAARREVEALAAVCPNEGCTWTGTVRE
FEASHEGNCDFMIIMCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKTPCRFHVVGCDTSVEKEKIQDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQTLEVASQKLQVLHQSLRELELKMSQLGGGGPTPVQG
ACALTLATSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVNTFENIVCVLNREM
ERSCTTMEAYNRQHRLDQDKIEILSNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDGV
FIWKISDFTKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVV
MRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFC
PLSKLDSKNSYIRDDTIFIKAIVDLTGL
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggctgcacaagagccgtctccaccatcttccctggaaggcaacaagccgggcttccca
aagaaaattctggccaacaacctggaggacaagcatctgtgcaactcgtgtcagaaaatc
ctgcggaggcccctgcaggcccagtgcggccaccgcttctgctcgttctgtttcaacaag
ctggtgagttctggaccacagaaatgcagtgcatgcatcaaggaggagttgtttgaggag
cccacctccattctcaagcctggcggtgcgttcccagacaacgcagctcggagagaggtg
gaggccttggcagcagtttgtcctaatgaaggatgcacatggactggaaccgtcagagag
tttgaggcgagccatgagggcaactgtgacttcatgatcatcatgtgtccgtcgtgcaaa
gagctgatgagagccaacgaacaggagcgccacaacgagcgagagtgtccagagaggaca
cttaactgcaaatactgcaaagagccgttcctcttaaagaacatcaaggctcatgatgaa
atctgccccaagtatccaatgatctgtgaaggctgtgcaaagaaaaagatcccccgtgag
aagtatgtggaccatattaagttctgcagtaaatttaaaacaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaggagaagatccaggaccacgagcggcagtgttcg
tatgagcacctcaacctgctgctgcatttcatcatgggcatcaaggtgagtctggagagc
ctccaaccgcagaccttagaggtggccagccagaagctccaggtgctgcaccagtccctc
agagagctggagctgaagatgagccagctgggcgggggcggccccactcccgtgcagggt
gcatgcgctctcaccctggccacgtccttcacccctctgcccagcgccatgggtgccgcc
ctggagctgcagctccagagcgagaagaccaaggtggccgagctgagccggcgctgccag
gagctggagctgaaagtgaacacgtttgaaaacatcgtctgcgtcctgaaccgggagatg
gagcgttcctgcaccaccatggaagcctacaaccgccagcacagactggaccaggacaag
attgagattctcagcaacaaggtccgtcagctggaaaggacggtcagcctgagggatctg
tccatcgtggagatggaggggaagatgagggagatgtctgcagccacctacgatggcgtc
tttatctggaagatctctgatttcaccaagaagaggcaggatgccgtggctggccgcgct
cctgctatgttctctcccgcattttatacgagtaaatacggctacaagatgtgcttacga
atctacctgaatggtgacgggacgggccgtggcacgcacctgtctctgttctttgtggtg
atgagaggacacagcgacgcactccttaagtggcctttcaatcagaaggttaccctcatg
ctgcttgaccagaacaacagggagcacataatcgatgccttccggcccgacatctcatct
tcgtctttccagaggcccgtcagcgacatgaacatcgccagcggctgcccgctcttctgt
cctctgtctaagctggactccaaaaactcctacattcgtgacgacaccatcttcataaag
gccatcgttgacctcactgggctctag

DBGET integrated database retrieval system