Xiphophorus couchianus (Monterrey platyfish): 114156001
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Entry
114156001 CDS
T05908
Name
(RefSeq) tropomyosin alpha-3 chain
KO
K09290
tropomyosin 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
xco04814
Motor proteins
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114156001
04820 Cytoskeleton in muscle cells
114156001
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
114156001
04261 Adrenergic signaling in cardiomyocytes
114156001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114156001
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
114156001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Lebercilin
TMF_DNA_bd
PUMA_CC
DUF3450
ATG16
DUF745
CENP-F_leu_zip
Nuf2_DHR10-like
XhlA
Crescentin
SlyX
DUF16
Fez1
BORCS7
Motif
Other DBs
NCBI-GeneID:
114156001
NCBI-ProteinID:
XP_027891959
LinkDB
All DBs
Position
13:complement(27393845..27404039)
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AA seq
284 aa
AA seq
DB search
MEAIKKKMLMLKLDKENALDRAEQAEADKKGAEERSKQHEDELLQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELAEAKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatcaaaaaaaagatgcttatgctgaagctggacaaggagaatgcattggac
cgggctgagcaagctgaggcagacaagaaaggagccgaggagaggagcaaacagcatgaa
gacgaacttctgcagatgcaaaagaagctgaaggggacagaagatgagctggacaaatat
tcagaagccctgaaggatgcccaggagaagctggaggttgctgacaaaaaggctgctgat
gccgaggcagaggtggcttccctgaacagacgcatccagcttgtggaggaggagttggac
cgagcgcaggagagactggcaacagccctgcagaaactggaagaagctgaaaaagccgct
gatgagagcgagagaggcatgaaggtgattgagaacagggccctaaaggacgaggagaag
atggaactccaggagatccagctgaaggaagccaaacacattgctgaagaagctgatcgc
aaatacgaggaggtggctcgtaagctggtgattgtagaaggagagttggaacggactgag
gagagagcagaactggctgaggcaaaatgtgcagagctggaggaggaactgaagaatgtc
accaacaaccttaagtctctggaggcacaagctgagaagtattctcaaaaagaggacaag
tatgaggaagaaatcaagatcctaactgacaagctgaaagaggctgagacaagagctgag
tttgctgaaagatctgtagccaagctggagaagactattgatgatctggaagatgagctt
tatgctcagaagctcaagtacaaagccatcagtgaggagctggaccacgccctcaatgac
atgacctccatctaa
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