Xiphophorus couchianus (Monterrey platyfish): 114156867
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Entry
114156867 CDS
T05908
Symbol
tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114156867 (tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114156867 (tdg)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
114156867 (tdg)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
114156867 (tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
114156867
NCBI-ProteinID:
XP_027893241
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Position
2:complement(27241489..27250241)
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AA seq
454 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVRSAQQFQALQAQYANFNPQHQFHYPESPTAEAARAHMAN
PEPTMEQTEPADLTKPPTKKRGRPAQPKEPKPPKIPKAPKAPKVPKAPKPPKDPNAPKAK
PGPKPKKAAEAQGEGKQEKIDESFKKVKRKVDRFKGMTEEEVMKKTLPDLLDYNLDYVII
GINPGLMAAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPVKYKMGFTNMVSRAT
PGSKDLSSKELREGGKILVEKLKKYKPLIAVFNGKCIYEMFCRELFGKKPQKLEFGLQPH
KIPECDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGTRKAAEIEEVNYTFDL
QLAKEDAKRLAIKEEQYDPGYEDAYGGAYVERGAEEGQANSQTNGHCTLSSTANSEGAQE
ATTSQSEGQLPDGQWMTQSFADEIPNIGPNAGSV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagctgaatggatcactgcctgttgtctccccggagtatcttcatcagtgg
gttcggtccgcccagcagtttcaagctctccaggctcagtacgccaacttcaaccctcaa
catcagttccactaccccgagagcccgactgcggaggcggccagggcccacatggccaac
ccagagcccaccatggagcagacggaacctgctgacctgactaaacctccaactaaaaag
agaggtagaccagctcaacccaaggaaccaaagccccccaaaatccccaaagcaccaaaa
gccccgaaggtcccgaaagcaccaaaaccaccgaaagacccaaatgcaccaaaagctaaa
ccaggtccaaaacccaagaaggccgctgaggctcagggtgagggcaagcaggagaagatc
gatgagagcttcaagaaggtgaagaggaaagtggaccgcttcaaagggatgacggaggag
gaagtcatgaagaagacattgcccgacctgctggattacaacctggactatgtcattatt
ggtataaacccaggactgatggcagcttttattggccggtggtttccaggacctggaaat
catttttggaaatgcctgtttctgtctggatttaccgaggagcaactcaaccacatgcac
gacacaacgctgccggtcaaatacaaaatgggcttcaccaatatggtatccagggcaaca
ccggggagcaaagacctctccagtaaagaattgcgagaaggagggaaaattctcgtggag
aagttgaagaagtacaaaccgctcattgctgtgttcaatggaaaatgtatctatgaaatg
ttctgcagggaattgtttggcaagaaaccgcaaaagctggaatttggtttgcagccgcac
aagatcccagaatgtgacgtggccttgtacctgatgccttcctccagcgcccgctgtgcc
cagtttcctcgcgctcaggacaaggttcacttctacatcaaactgcgggagctccgggat
cagctgaagggcacccggaaagctgccgagatcgaggaagtcaactacacattcgatctt
cagttagctaaggaggatgcgaagaggttagcaataaaggaggagcagtatgacccgggg
tatgaggatgcctacggcggcgcgtatgtggagagaggagctgaagaaggccaggccaat
agccagaccaacggtcactgtacgctctcatctaccgcgaactcagaaggagcacaggag
gcgaccacatctcaatcagagggtcagctcccagacggacagtggatgacccagtcattt
gccgatgagattcccaacatcggaccaaacgctggcagcgtgtga
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