Xiphophorus couchianus (Monterrey platyfish): 114157697
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Entry
114157697 CDS
T05908
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
114157697
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114157697
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114157697
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Nectin family
114157697
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
V-set
ig
Ig_2
C2-set_2
LapA_dom
2CompART
T4SS_pilin
Ig_5
Lectin_N
Helicase_IV_N
Motif
Other DBs
NCBI-GeneID:
114157697
NCBI-ProteinID:
XP_027894628
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Position
14:complement(2764467..2803355)
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AA seq
605 aa
AA seq
DB search
MTSLLYRFSLGLLGLQIFVMGVQGQSEDAPSKVSFTTLEEKETVLPCPYELNEEKVVQVT
WYKISYDENKEQMITVHMTDGQYVSEKWKDRVRFKSNQPIVDSTLVITSTKPSDESDYLC
QITLFPSGSIVKEMHLTVQTIPISSLDPVYVKEGDSYKVVASCRSVAVPPPELSWDTELN
GHAVKQISDKGVVSTHFSLHPLRSMNGKKLDCLVHHPVYDKPRRIQNQLVVHFPPNAEVS
GYSKKWSVGMENAALTCKHAGSPEPALTWTRLGGQLPSGAVPHPDGRLVFERPLNTNDSG
TYQCLVKNSEGEDKDTVTIALGAETTIDLKKLIFIIAGGVAAGLLILMLILTCHHQRKNK
KLKKELTQKKEEISTLSRQASFRRVNSVSTDARDVLLELDEHHPLRVEGTLRNSLSSLGV
SLQINEQARCRDSRSTVSGGRGGGAPAFDSLGRPSIYNNSRRGRDRPMDRDSETRLRVEQ
YVRNSNMSLQDPRLLPPLLQPTYPVVRSTEILRQMNGNAVIPTEGGSHSGSAIRNYQPPP
ISCTYQQVAYDEDEIDEGLGGPASQEHPDDQDSVASSSNFSKNRISPQSHNHNPHTSYVH
KAQIV
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctgctctacagattctcattgggtctccttgggctccagatcttcgtgatg
ggggtacagggacagtctgaggacgctccatcaaaggtttcctttacgactttggaggag
aaagagaccgtcctgccctgcccgtacgagctgaacgaagagaaggtggtgcaggtcacc
tggtataagataagctatgatgagaacaaggagcagatgattactgtacacatgaccgat
ggccagtatgtgtccgagaagtggaaagaccgcgtgcgctttaagagcaatcaacccata
gtggattcgactctggtcatcaccagcacaaagccctccgatgaaagcgattacctctgt
cagatcactcttttcccatctgggagcattgtcaaagagatgcatctcaccgtgcagacc
attcctatcagctccttggatcctgtctatgtaaaggagggcgattcctacaaggtggtg
gcctcctgtcgctctgtggccgtcccacctcctgagctctcctgggacacagaactgaac
ggtcatgctgtcaaacagatctctgataagggggttgtctccacacacttctctctgcac
cctctgaggagtatgaatggaaagaagctggactgcctggttcaccatccagtatatgac
aaaccgcgcaggatccaaaatcaactggtggtgcactttcctccaaacgctgaagtgtct
ggctacagtaaaaaatggtctgtcggtatggagaatgctgccctgacgtgcaaacatgca
ggaagccctgaaccagccctcacttggaccagattaggtgggcagcttcctagcggtgca
gttcctcaccccgatggaagactcgtctttgagcgacctcttaacaccaacgactccggc
acctatcagtgcttggtgaagaactcagagggtgaagataaggatactgtgaccatcgct
ttaggagcagagaccacaatcgatctcaagaagttgatattcatcattgcgggaggcgtg
gcggccggcctgctgattctcatgctcatcctcacttgtcaccaccaacgcaagaacaag
aagctgaagaaggagctgactcaaaaaaaagaagaaataagcactctgtccagacaagct
tcgttcaggagggtgaactctgtcagcactgatgccagagacgtgttactagaacttgat
gaacaccaccctctgagggtggagggaaccctgaggaacagcctgtcatccctcggggtc
agtctacagatcaatgagcaggcccgttgccgtgacagcagatcaactgtctcaggtggg
cgcggaggaggggctcccgcgttcgactctttaggcagaccgtccatctacaacaactcc
cggaggggaagggacaggcctatggatcgggacagcgaaacccggcttagagtagagcaa
tatgtgagaaacagcaacatgtccttgcaggaccctcgattgcttcctcctctgctacaa
ccgacatatcccgtggtccgctcaacggagatcctaagacagatgaacggcaatgccgtc
atcccaacagaggggggttcccattcaggaagcgccatcaggaactaccagccccctccc
ataagctgcacataccaacaagtggcgtacgacgaggatgagatcgacgaagggctggga
ggccctgccagtcaggagcatcctgacgatcaggatagcgttgcctccagctcgaatttc
tcaaagaacagaataagccctcagtctcacaatcataacccccacacttcatatgtccac
aaggcccagattgtttag
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