Xiphophorus couchianus (Monterrey platyfish): 114158504
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Entry
114158504 CDS
T05908
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
114158504 (dse)
Enzymes [BR:
xco01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
114158504 (dse)
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Gene cluster
GFIT
Motif
Pfam:
DUF4962
CvfB_WH
Motif
Other DBs
NCBI-GeneID:
114158504
NCBI-ProteinID:
XP_027895873
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All DBs
Position
15:24182139..24259401
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AA seq
968 aa
AA seq
DB search
MRTHTRGAPTVFFISLLWPLLAPVPAAEVDPAGGISFMGGNYDSHPMLYFSRGDVEELQY
AAAGTHRQMARRIREAGETMLEHPEEYLPPWSPTEFTARWNEVYGNNLGVLSMFCLLYPH
RAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQQDRFL
QVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQVLS
IMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFAIGHFSHPWLLKHFAFLY
RTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLADLINQNRITEGPGQA
GKGQRWCTLHTEFIWYDPGLIPKPPADFGTSQLHYFEDWGVVTYGGALPSGTNSSFLSFK
SGKLGGRAIFDIVHNNKYKEWIKGWRNFNAGHEHPDQNSFTFAPNGVPFITEALYGPKYT
LLNNVALFGSTLSGSCFKPWAGQVTEACDSKWLKYKVGLAADAQGRVEAAIKREGMVFIR
GEGHSAYNPELKIRNFQRNLLLLHPQLLLMVDHIHLDPGSPTRAMSAFFHNTELPFQSTK
VDGVHGAFVTHGKENYKMFWMDDTNSSNKGMVSYWSYPRGYPYNGSNYVNVTMPLRYPHT
RVAYIFFGPGLDVQSFSLRGDDQRVDIYLSTKDHTYTIYLLTGEVTSKPVFAIVLLDHKK
IVFERAAAVVDSFPVEVEEYASVMEDNLQHVKPVFQQMERHILGRVLNTASFRRTAEHLL
QFSDKKKTEEVIKKMFAMSKKQNKAKGGKRLNLGEKLSESLPDIFAQIEVNEKKERQRMS
KRTYEDSPEEGDADSRAFVDYPAGYRNRKGGLVKGRRFKEVHIVTTARSEGLSGNPSYIR
LFLLMNTTTFFLLLAVLLTRFQRGRSLHTQSFRGMHLQVKKQTGGPSESVYQEAHSACQS
SQMFLKGS
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagaacccacacccgtggggcccccacagtcttcttcataagtctgctgtggcccctg
cttgctccagttcccgcagctgaagtggaccctgccgggggaatttccttcatgggaggc
aactatgacagtcatcccatgttgtacttcagccgtggggatgtggaggagctacagtac
gcagcagcaggaactcatcggcagatggccaggaggatccgggaggctggggagaccatg
ctggagcacccagaggagtacctgcccccttggagccccacagagttcactgcccgctgg
aatgaggtctatggaaacaatttgggtgtgctgtccatgttctgcctgctatacccgcac
agggcaggggccctcgacctggccaaggactacatggagaggatggcggctcagcctagt
tggttggtgaaggatgccccctgggatgaagttcctttggcacactcgctggttggattt
gccacggcctacgacttcctgtatgagtacttgaacaaaggccaacaggatcgcttcctt
caggtgataggcaatgcatctcgcttgatgtacgagaagtcctatgtacgtggctggggg
ttccagtacctgcacaatcatcagcccacaaactgtgtggctctgctcaccggaagcctg
gtctacatgacccaaggttaccttcaggaagcctacctgtggacaaagcaagttctgtcc
atcatggagaagtctatggtccttctgcaggacgtgacagatggttcactttatgagggt
gtggcctatgggacctacaccacccgttccctattccagtacatgtttctggtgcagcgc
cactttgccatcggccacttcagccatccttggctactgaagcactttgccttcctctac
aggaccatcctaccaggatttcagcggaccgtggccatcgcagattccaactacaactgg
ttctacgggccagagagccagctggtcttcttggatcgctatgtgttgcgtaatggcagt
gggaattggctggcagatctgattaatcaaaacaggattacagaagggccgggacaggct
ggaaagggccagcgatggtgcacgctgcacacggagttcatttggtatgaccctggcctg
atccccaaacccccagcagattttggaacatctcagctccactacttcgaggactggggt
gtggtgacgtatggcggtgctttgccttctggcaccaacagctcctttctatccttcaag
tctgggaaactagggggacgtgccatctttgacatcgttcacaataacaagtacaaagag
tggatcaaaggctggaggaacttcaacgctggtcacgagcacccagatcagaactctttc
acctttgcacccaacggtgtcccgttcatcacggaggcactgtatggacctaagtacact
ttgttaaataatgtggcattgtttggctcaaccctgtctgggagctgctttaaaccttgg
gctggacaagtaacagaagcctgtgactctaagtggttaaagtacaaggtgggccttgca
gctgatgcccagggcagagtggaagctgctataaagagagaggggatggtcttcattcgt
ggcgaaggacattcggcttataacccagaactgaaaatcaggaacttccagaggaacttg
ctgcttcttcacccacagcttctgctcatggttgaccacatccacttggacccagggagc
ccaacaagggccatgagtgccttctttcacaacacagagctgccatttcagagtacgaaa
gtagatggtgttcatggagcgtttgtaacacatgggaaggagaactataagatgttttgg
atggatgacacaaactccagtaacaaagggatggtgagttactggagttaccctcgaggg
tatccctataatggctccaattatgtgaatgtaacaatgccactgaggtacccgcacacg
agggtggcctatattttctttggaccaggcttggatgtacagagcttcagcttacgtggg
gatgatcagcgggtggatatttacctctccaccaaagaccatacctacaccatctacctt
ctgacaggggaggtcaccagcaagcctgtgttcgccatagtgctgctggaccacaaaaag
attgtgtttgagagagcagcagctgttgtagacagcttccctgtggaagttgaagaatac
gccagtgtgatggaggacaatctccagcatgtcaaacctgtcttccagcagatggaaaga
cacatcctgggacgagtcctcaacactgccagcttccgtaggaccgctgagcacctcctt
caattctctgacaagaagaagacagaggaggttattaagaagatgtttgctatgtccaag
aaacagaacaaggccaaggggggaaagaggttaaaccttggagagaagctgtctgagagt
ctgcctgacatttttgcacaaattgaggtcaacgaaaagaaagagagacagaggatgtca
aagcgtacatatgaggacagtccagaggaaggggatgcagactcaagggcctttgtggat
tatccagctggttacaggaacaggaaggggggcttagttaaaggccgcaggtttaaggag
gttcacattgtgaccacagcaaggagtgaggggctctctggtaacccctcctacataaga
ctgttcctacttatgaacaccactaccttcttcctactgctggctgttctgcttactcga
tttcagaggggacggagcctgcacacgcagagttttcgggggatgcatctgcaggtaaag
aagcagaccggaggcccctcagagtcagtttaccaggaagcgcattcggcctgccagagc
tcacagatgttcctaaagggaagctga
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