Xiphophorus couchianus (Monterrey platyfish): 114159492
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Entry
114159492 CDS
T05908
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114159492
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114159492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
114159492
NCBI-ProteinID:
XP_027897257
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All DBs
Position
16:2591266..2623996
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AA seq
1766 aa
AA seq
DB search
MAPLLPPVGAEVFRRFTPASLEEIQRRHEAEEKEQQIRKEQNIEIAEEDLPKPASDLEAG
KPLPFIYGDPPAGFLNIPLEELDPFYQSQKTFIVLSKGNVIYRFNAEPACYVLSPFSPLR
IFSIRILIHSLFSLFIMVTILTNCVFMTMSDPPPWSKTVEYVFTGIYTFEATIKVLSRGF
CMGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLRDVMILTVFCLSVFALIGLQLFMGNLRQKCVLIPPLLRNDTSEGTFNISFH
ENNSSDFEFYTHINNPDNYYYLPGQLDALLCGNSSDAGTCPDGYMCLKAGRNPNYDYTSY
DSFSWAFLSLFRLMTQDFWENLFHLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMA
YAEQNEANIAEAKQKEEEYAQILEALKQREEEQAAKRAALLENQDPTSQSQEEHTNMEEF
EDDQRPCPPCWYVFANIFLKWDCCGCWRWLKKLLYTIVMDPFVDLSITICIVLNTVFMAM
EHYPMTEQFEDLLSTGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTMSLVEL
GLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKNYKDCVCRIAQDCELPRWHMNDFFHAFLIIFRVLCGEWIETMWDCMQVAGEPM
CLIVFMMVLVIGNLVVLNLFLALLLSSFSGDNLAVTEDEGENNLQIAINRISRGIAWTKA
WFLNHIWSLVGKKTNVNSDATAVPCEEGEKSKEVLALTIVNSEQPMVQVPKVDLSFLSSY
YLNITSLKVPIAEAESDFDMPENEDDEDEDEDNEEDDIEEQLSQGDESSVCSTVQRAPEV
PKIEEVEETPEDCYTEKCYNRCPCLDIDTSQSKGKIWFNCRKTCFTIVEHNYFETFIIFM
ILLSSGALAFEDIYIEQRRVIKIILEYADQVFTYVFVVEMILKWVAYGFKTYFTNAWCWL
DFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSI
FNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSEEYFSPEEVNNKTQCLDLIEKGFSEV
RWKNTKINFDNVGMGYLSLLQVSTFKGWMDIMYAAVDSREVESQPMYEDNLYMYMYFVCF
IIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGSKKPQKPVPRP
TNKFQGLVFDLVTKQFFDILIMVLICLNMVTMMVETDEQSPEKENILYWVNLVFIVIFST
ECCLKMIALRKHYFNVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRI
LRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKESMIDDIFN
FESFGNSMICLFMITTSAGWDGLLNPIMNTPPDCDPEFENPGTTVRGNCGSPAVGIVFFT
SYIIMSFLVVVNMYIAIILENFNVATEESADPLSEDDFDMFYETWEKFDPRASQFIHYSE
LSDLCDVLQDPMRIPKPNTIKLIQMDLPLVPGDKIHCMDILLALTAEVLGESEAMDALKA
TIEDKFMANNPTKKLYEPISNTLRKKHEELAAAVIQRAYRRHLLQRVIKLASYKYRERTG
GQRDNLSPPETEGFLCKRMDQLYGDSETALAAPAEDRTVQVEPQRDILLHSAPPHSDCNF
LHDESLTETMMQLETNSNQECFLSKK
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggcacctctgctgccccctgttggtgcggaggtgtttagacggttcacaccagcctca
ctggaggaaattcagcggaggcatgaagctgaagagaaggagcagcaaatcagaaaggag
cagaacattgagatagcagaggaggatcttcctaaaccagcaagtgacctggaagctggg
aagcccctcccctttatttatggagacccgcccgctgggtttctcaacatcccattggag
gagctggatcctttctaccaatcacaaaagaccttcatcgttctcagtaagggaaatgtc
atctacaggttcaacgctgaaccagcctgttacgtactgagtcccttcagcccactgagg
atcttctccatcaggatcctcatccattctttattcagcttgttcatcatggtgacaatc
ctgaccaactgtgtgttcatgaccatgagtgatcctccaccatggagcaagacagtggaa
tacgtattcacgggcatctacacgtttgaggcaaccatcaaagttttgtccagagggttc
tgcatgggagacttcaccttcctgagagatccgtggaactggctggacttcatggtcatc
agcatggcatacctgacagagtttgttgacttgggaaatgtatcggcactgaggacgttc
agagttcttcgagccctgaaaaccatcacagtaatccctggtttaaagacgattgtcgga
gctctcatccagtcagtgaagaagctgcgtgatgtcatgattctgactgtcttttgcctc
agtgtctttgctctgattggtcttcagctattcatgggaaacctcagacaaaaatgcgtt
ctgatcccaccgctcctacgcaacgacacatcagagggaactttcaacatcagtttccac
gaaaacaacagcagtgactttgagttctacacacacattaacaacccagacaattattac
tacctacctggtcaacttgatgccctgctgtgtggaaacagctctgacgcagggacctgt
ccagatggatacatgtgtctgaaggcagggagaaacccaaactatgactataccagctac
gacagtttcagctgggcgtttctgtctctgttcagactcatgactcaggacttctgggaa
aatctcttccacctgacgctgcgagcggcaggcaaaacctacatgatcttcttcgtggtc
atcatcttccttggttccttctacctcattaatctcatcctggcggtggttgccatggcg
tacgccgagcagaatgaggctaacattgccgaggccaaacaaaaagaagaggagtatgcc
cagattctggaggcactgaagcagagagaagaggagcaagcggccaagagggcggcgctc
ttggagaatcaagaccccacatcacaaagccaagaggagcatacgaacatggaagagttt
gaggatgaccagagaccatgtcctccatgctggtacgtgtttgctaacatcttcctgaag
tgggactgttgcggctgttggcgatggctgaaaaaacttctgtatactatcgtcatggat
ccatttgtggatctctccatcaccatctgcattgtcctcaacactgtcttcatggccatg
gaacactatccaatgactgagcagtttgaagatcttctcagcactggaaatttggtcttt
acagggatcttcacagctgagatggttctcaaacttttagcgatggatccatattattac
ttccaggtgggctggaacatctttgatagcatcatcgtcaccatgagtctggtggagcta
ggactggctaatgttcagggtctgtcagtgttgcggtccttcagattgatgagagtgttt
aagctagccaagtcatggccgactctcaacatgttgataaagatcatcggcaactctgtg
ggagccctggggaacttgacgctggttctcgccatcattgtcttcatcttcgctgtcgtt
gggatgcagttgtttggaaagaactacaaagactgtgtctgccgcattgcccaggactgt
gagcttcctcgctggcacatgaacgacttctttcatgccttcctcatcatcttcagggtt
ctgtgtggcgagtggattgagacaatgtgggactgtatgcaagttgctggggaacctatg
tgtctgattgtctttatgatggtactggtgattggaaacctggtggtcctgaatctgttc
ctggccttgctgctaagctcattcagtggggataatcttgcagttacagaagatgaagga
gaaaataatctccagattgcaataaatcggatcagtaggggtatagcctggaccaaggcc
tggttcctgaaccacatctggtctttagtgggaaagaaaacaaacgtgaactcagatgcg
actgctgtaccctgtgaagaaggcgaaaaatcaaaggaagttttagctctgacaatcgtg
aattcagagcagcccatggttcaagttcccaaagttgatctgtcattcctgagcagctac
taccttaacatcacatctttgaaggtccccattgctgaagctgagtctgattttgacatg
cctgaaaatgaagacgatgaagatgaggatgaagataatgaggaggatgacatagaagaa
cagctttcacaaggtgacgagtcttcagtctgcagcactgtgcagagagctcctgaagtc
ccaaaaatagaagaggtagaagaaactccagaggactgctatacagaaaagtgttacaat
cgctgtccttgtctggatatagacacatcccagagcaaaggaaagatctggtttaattgc
aggaaaacttgcttcaccatcgtagagcacaactactttgagacattcatcattttcatg
atcctgctgagcagtggagctctggcctttgaggacatctacattgagcagcgccgtgta
atcaaaataattctggaatatgcagatcaggttttcacctacgtgtttgtggtggagatg
attctcaaatgggttgcttatggattcaagacctacttcaccaatgcctggtgctggctg
gacttcctcattgtagatgtttctctggtgtcactgacagcaaacatcctgggatactct
gagctgggagctattaagtctctgaggactctgagagcattaaggcccctaagagccctg
tctcgctttgagggcatgagggtggtggttaatgcattggttggagccatcccctccatc
ttcaacgtgctgctggtctgtctgatcttctggctcatctttagcatcatgggtgtgaac
ctgtttgcagggaagttttattactgcttcaacgaaacatcagaggagtatttctctcct
gaggaagtcaacaataaaacccagtgtctcgatctgattgagaagggcttctccgaggtt
cgctggaagaacacaaagatcaactttgacaacgttgggatgggctacctgtctctgctg
caagtgtccacatttaaaggctggatggacatcatgtatgcagcggtggactccagagag
gtggagtcccagccaatgtatgaggacaacctctacatgtacatgtactttgtctgcttc
attatctttgggtccttcttcaccctcaacctcttcattggagtcatcatcgacaatttt
aaccagcagaaagcaaagctcggaggaacagatatatttatgacagaagaacagaagaaa
tactacaacgccatgaagaaactgggatccaagaagcctcagaagcctgttccccggcct
acaaacaagttccagggtctagtctttgaccttgtgaccaagcagttttttgatatcctc
atcatggtgttgatctgcctcaatatggtgacaatgatggtggaaacagatgagcagagt
cctgaaaaggaaaacatcctgtactgggtcaaccttgtcttcattgtcatcttcagcaca
gagtgctgtctcaaaatgatcgctctacgaaagcactactttaatgtcggatggaacata
tttgactttgtagtggttatattgtccattgttggccttcttcttgctgatatcattgag
aagtacttcgtttctcccactctcttccgtgtgatccgactggctcgcattgggcggatt
cttcgtctcattcgtggagctaagggaattcgaacactgttgtttgccttaatgatgtct
cttcctgccctcttcaacattggcctccttctcttcctcatcatgttcatcttctccatc
tttgggatgtctaattttgcttacgtgaagaaggagagcatgattgatgatatctttaac
tttgagagctttgggaacagtatgatctgcctgtttatgatcactacatcagctggatgg
gacggactgctgaatcccatcatgaacacacctccagactgtgatccagaatttgaaaac
ccaggcacaactgtcagaggaaactgcggcagcccggcagtgggcattgtcttttttact
tcatatatcatcatgtcttttctggtggtggtgaacatgtacatcgccatcatcctggag
aactttaacgtcgccacagaggagagcgctgacccactttctgaggatgactttgatatg
ttctatgaaacctgggagaagtttgaccctcgagcttcgcaattcatacactacagtgag
ctgtcagacctgtgtgatgttctacaggatcctatgaggattcccaaacccaacaccatc
aaactgatacaaatggacttgcctttggttcccggagacaagatccactgtatggacatc
cttctagctctcactgcagaggttttgggtgaatctgaggcaatggatgctctaaaggca
acaatagaggataagttcatggccaacaatcccacaaagaagttgtatgaaccaatcagc
aacactttgcgtaagaaacacgaggagctggcagcagcagtgatccagagagcctacagg
agacatcttctgcagcgagtgatcaaactggcatcctacaagtatagagagaggacaggg
ggacagcgagacaatctgtctccaccagagacagaaggatttctctgcaaacgaatggac
cagctttatggagacagtgagacggctctggctgctccagctgaggaccggactgtccag
gtggaaccacagagggacattcttctccactctgctcctccacacagcgactgcaacttc
ctacacgatgagagcctgacagagacgatgatgcagctggagacaaactcaaatcaggag
tgtttcctgtcaaagaagtag
DBGET
integrated database retrieval system
