KEGG   Xiphophorus couchianus (Monterrey platyfish): 114159761
Entry
114159761         CDS       T05908                                 
Symbol
actb
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082  ATP-dependent chromatin remodeling
xco04145  Phagosome
xco04210  Apoptosis
xco04510  Focal adhesion
xco04520  Adherens junction
xco04530  Tight junction
xco04810  Regulation of actin cytoskeleton
xco04814  Motor proteins
xco04820  Cytoskeleton in muscle cells
xco05100  Bacterial invasion of epithelial cells
xco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114159761 (actb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    114159761 (actb)
  09143 Cell growth and death
   04210 Apoptosis
    114159761 (actb)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    114159761 (actb)
   04520 Adherens junction
    114159761 (actb)
   04530 Tight junction
    114159761 (actb)
  09142 Cell motility
   04814 Motor proteins
    114159761 (actb)
   04820 Cytoskeleton in muscle cells
    114159761 (actb)
   04810 Regulation of actin cytoskeleton
    114159761 (actb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    114159761 (actb)
   05100 Bacterial invasion of epithelial cells
    114159761 (actb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xco03021]
    114159761 (actb)
   03019 Messenger RNA biogenesis [BR:xco03019]
    114159761 (actb)
   03036 Chromosome and associated proteins [BR:xco03036]
    114159761 (actb)
   03029 Mitochondrial biogenesis [BR:xco03029]
    114159761 (actb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xco04812]
    114159761 (actb)
   04147 Exosome [BR:xco04147]
    114159761 (actb)
Transcription machinery [BR:xco03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     114159761 (actb)
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     114159761 (actb)
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     114159761 (actb)
    NuA4 complex
     114159761 (actb)
  Chromatin remodeling factors
   BAF complex
    114159761 (actb)
   PBAF complex
    114159761 (actb)
   GBAF(ncBAF) complex
    114159761 (actb)
   SWR1 complex
    114159761 (actb)
Mitochondrial biogenesis [BR:xco03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    114159761 (actb)
Cytoskeleton proteins [BR:xco04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     114159761 (actb)
Exosome [BR:xco04147]
 Exosomal proteins
  Proteins found in most exosomes
   114159761 (actb)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 114159761
NCBI-ProteinID: XP_027897695
LinkDB
Position
16:18580202..18584115
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaatcgccgcactggttgttgacaacggatccggtatgtgcaaagccgga
ttcgccggagacgacgcccctcgtgctgtcttcccatccatcgttggtcgcccaaggcat
cagggcgtgatggttggtatgggccagaaggacagctatgtaggtgatgaagcccagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaggag
caccccgtcctgctcacagaggcccctctgaaccccaaagccaacagggagaagatgacc
cagatcatgtttgagaccttcaatacccccgccatgtacgttgccatccaggccgtgctg
tccctgtacgcttctggtcgtaccactggtatcgtcatggactccggtgatggtgtgacc
cacacagtgcccatctatgagggctacgccctgccccatgccatcttgcgtctggatttg
gccggccgcgacctcacagactacctcatgaagatcctgacagagcgtggctactccttc
accaccacagctgagagggaaatcgtgcgtgacatcaaggagaagctgtgctatgtcgcc
ctggacttcgagcaggagatgggtactgctgcctcctcttcatccctggagaagagctac
gagctccctgacggacaggtcatcaccatcggcaatgagaggttccgttgcccagaggcc
ctcttccagccttccttcctcggtatggagtcctgcggaatccatgagaccacctacaac
agcatcatgaagtgcgacgtcgacatccgtaaggacctgtacgcaaacaccgtgctgtct
ggaggtaccaccatgtaccctggcatcgctgacaggatgcagaaggagatcacagctctg
gccccatccaccatgaagatcaagatcatcgccccaccagagcgtaaatactctgtctgg
atcggaggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtctggcccctccatcgtccaccgcaaatgcttctaa

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