Xiphophorus couchianus (Monterrey platyfish): 114159932
Help
Entry
114159932 CDS
T05908
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04514
Cell adhesion molecules
xco04672
Intestinal immune network for IgA production
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114159932
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114159932
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
114159932
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114159932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114159932
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114159932
Exosomal proteins of epithelial cells
114159932
Exosomal proteins of breast milk
114159932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
MHC_II_beta
Ig_3
DUF2627
Motif
Other DBs
NCBI-GeneID:
114159932
NCBI-ProteinID:
XP_027898008
LinkDB
All DBs
Position
16:14159326..14162576
Genome browser
AA seq
254 aa
AA seq
DB search
MNAYNFLFTLFVSLGNPAVFSDEDFYQVKACCSFNGPNFDKIEYILTASFNKQKMLEYNS
TRGNWIGFTDYSIVASTFWNKDPLDRLERAMEIKLMCFDNRAFIQTIRNLSTTPTMRIKS
VKQPDGRHPAVLVCSAYNFYPKQIQITWLRNDQEVTEGVSNIDVIPDGELYYQFHSYLEY
TPTSGERISCMVEHVTLSEPRIIVWNNSLPEGEKTTIVVGLCGLIIGLVIFISGFIYHKK
KYALYNSVHQGEEM
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttacaattttctttttaccttgtttgtatcgcttggaaatccagcagttttt
tcagatgaagatttttaccaagtcaaagcatgttgttcattcaatggtccaaacttcgac
aagattgaatacatacttacagccagttttaacaagcaaaagatgttggagtacaacagc
acaagaggaaactggattggattcacagattattcaattgtggcttcaacgttctggaac
aaagaccctttggaccgccttgaaagagcaatggaaattaaactaatgtgtttcgataac
cgagcattcatacaaaccatcagaaacctgtcaacaacgcccaccatgaggataaaatca
gtgaaacagcccgatggtcgacatccagctgtgcttgtgtgcagtgcctataacttttac
ccaaagcaaatccaaataacctggctgcgaaatgaccaagaagtgaccgaaggggtcagt
aacatcgatgtcatcccagatggagaattgtactaccagtttcattcttaccttgagtac
acaccaacttcaggagaaagaatcagctgcatggttgaacacgtcaccctgtcggagcca
agaatcattgtttggaacaactcccttcctgaaggagaaaaaactacgattgttgttgga
ctgtgcggattgataattggtttggttatctttatctctggatttatttaccacaagaaa
aagtatgctttatataactctgtccaccaaggtgaggaaatgtaa
DBGET
integrated database retrieval system
