Xiphophorus couchianus (Monterrey platyfish): 114160629
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Entry
114160629 CDS
T05908
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114160629 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114160629 (lemd3)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
114160629 (lemd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Corona_NS2A
Motif
Other DBs
NCBI-GeneID:
114160629
NCBI-ProteinID:
XP_027899088
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Position
17:complement(17256749..17266157)
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AA seq
831 aa
AA seq
DB search
MASTQLTDEELFSQLKCFGYTPGPVTENTRPVYLKKLKKFREEQQQQQRGKGRVSGTSSS
STGAPRPVRHDVRRLSSGRRPGLKSSVLGFSSDESDAETPLKRKGLDHMKKPSRSPHLQQ
QQLKIRAATPLNEANKKQYGVGTALKSNSFPSPDGQTSASLGWETGKRSMHDPESRDEDV
NDEVQNSHPVNGRSAARLNTSKLAGEYSDSDEEEVGGPGGPERDRRSLELRRIYTSGPFA
TLVDGRGSRIGGKNCALNPLGNRAMAGGREEDEERGKKGDLDASGGLRSHMLPRKSIYVS
LGEDHRSNTGENNHVNSEEGASGSNMASVALRPRYRAFYSSTLSPQGGYSNHIPVQNHAY
GPGTQKKKPTAPEDELLLQFKREEQPSSGSFSAHYLSMFLLTAACLFFLLLGLMYIRMRG
SGSPGGDGVIKSHPFGSNFDSSYSKTEKDVILKLLLSLHDHLAIVAGHHDCGEQQYASRS
LSREQVTQYLLAQNGDFKDFIDVSLEWIIRAGQDVGIRLSGQRADDLVTDVSEISWLEST
HPRMPFTCRFRRALLTVMNKVLVVAVVVGLVCSVIFYVKYRWRREEEETRQMYDMVERII
DVLRTHGEACQENRDLEPYLPIPHVRDSLVQPQDRRKMKKVWERAVKFLSANESRIRTET
QQIKGADFMVWRWIQPPLSSDKSKMWQGKAFPLDRRNSPPNSLTPCLKIRNMFDPDMEVG
DSWDLAIQEAILEKCSDNDGIVHISVDKNSKEGCVYVKCLSAEHSGKAFKALHGSWFDGK
LVTVKYLRLDRYHQRFPQAQGCSVPLKASSLHQTPAPCPLQHGGPNSSGFS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgcagttaacagatgaggagcttttttcccagttgaagtgcttcggttac
actcctggcccagtcacagaaaacacacgtccggtgtatttaaagaaactgaagaagttt
cgcgaggagcagcagcagcagcagcggggtaaaggccgagtcagcgggacgagcagcagc
agcactggggcaccaaggccagttagacatgacgtcaggcgcctgagctccggcaggaga
ccgggcctaaagtcctctgttctcggcttcagctctgacgaatctgacgcggaaacgcca
ctgaaaagaaagggcctggatcacatgaaaaaacccagccgaagcccacaccttcaacaa
caacagctgaagattagagcagctacgcctcttaacgaggctaacaagaagcagtatggc
gttgggactgctctgaaaagcaattcattcccgagcccagacggacagacaagtgcctct
ctgggttgggaaactggtaaaagatctatgcatgatcctgaatccagggacgaagacgtt
aatgatgaagtgcagaattcccacccggttaatggtcgcagcgctgctcgcctgaacaca
agcaaactagccggagagtactcagactcggacgaggaggaagttgggggccctggaggc
ccagagcgagaccggaggagtttggagctacgaaggatttacacaagcggaccgtttgct
acgcttgtagacggcagagggtcccggatcggaggaaaaaactgtgcgcttaatccgctt
gggaacagagccatggcaggcggcagagaggaggatgaggagagggggaagaaaggagac
ctggacgcatcgggaggtttacggagccacatgcttcccaggaagtcgatctacgtgtcc
ctcggcgaggaccaccggagtaacaccggggaaaacaaccatgttaacagcgaggagggg
gcgtccggcagcaacatggccagcgtcgcgctgagaccgcgctaccgcgctttctacagc
tcgaccctgagccctcaggggggctactctaatcacatccccgtccagaaccacgcatat
ggcccgggaacccagaagaagaagccaactgccccggaggatgagctgctgctgcagttt
aaaagagaggagcagccttcctccggaagcttcagcgcacactacctgtccatgttcctg
ctcaccgcagcctgcctcttcttcctcctgctcggcctcatgtacatccgcatgaggggc
tcgggatccccgggaggagacggtgtcattaagagccacccgtttggcagcaactttgac
tcctcatatagtaagacagaaaaagacgtgatcctaaagctgctgctcagcctccatgat
cacctggccatcgttgctggtcatcatgactgtggagagcagcagtatgctagcaggagt
ctgtccagagagcaggtcacacagtatttactggctcagaatggagactttaaagacttc
attgacgtctctctggagtggatcatccgagctggtcaggatgttggtataaggctgagt
gggcagcgagctgacgacctagtgacagatgtgtctgagatctcttggttggaatccacg
catcccaggatgccgttcacctgccgctttcgccgagctttgctcacagtcatgaacaaa
gtcctggttgttgccgttgttgtaggcttagtgtgcagtgtgatcttctacgtgaagtat
cgctggaggagagaagaggaggagacgaggcagatgtacgacatggtggagaggatcatc
gatgtgttaaggacccacggtgaggcgtgccaagagaaccgggacctggagccttacctg
cccatcccccatgtcagagactctctggttcagccccaggatcggaggaagatgaagaag
gtttgggagcgagccgtgaagttcctctcagctaacgagtccaggatccggacagagacg
cagcagatcaagggagcagacttcatggtgtggaggtggatccagccgcccctcagctct
gacaaatccaagatgtggcaggggaaagcattccctctggatcggaggaattcaccaccc
aacagtctgactccctgtctgaagatcagaaacatgtttgatccagacatggaggttggt
gacagctgggacttggccatccaggaagccatcttggagaaatgcagtgacaatgacggc
attgtccatatttctgttgataagaactctaaagagggctgtgtctatgtgaagtgtctt
tctgcagagcactcaggaaaagccttcaaagccctgcatggctcctggtttgatggtaag
ctggtgacagtcaagtatctgcgtctggaccggtaccaccagcgcttcccgcaggcccag
ggctgcagtgtgcccctgaaggcgtccagcctccaccagaccccggctccctgcccgctg
cagcacgggggccccaactcctcaggcttctcctga
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