Xiphophorus couchianus (Monterrey platyfish): 114161546
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Entry
114161546 CDS
T05908
Symbol
tiam1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04530
Tight junction
xco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114161546 (tiam1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
114161546 (tiam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114161546 (tiam1)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
114161546 (tiam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PH_10
PDZ_6
PDZ_2
InhA-like_MAM
Motif
Other DBs
NCBI-GeneID:
114161546
NCBI-ProteinID:
XP_027900665
LinkDB
All DBs
Position
18:complement(7349166..7398676)
Genome browser
AA seq
1595 aa
AA seq
DB search
MGNTESQNGEHALYSTGRGYLSRKHMSRSLRISNKQSRRSRHASSGKMEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNNFPDFGSPIWVDRVAMSLRPISFHNDLANPSLHMNTMHI
TLPGPTAEETQDEEVYTNEVKYIQQTLECSKETISFKKRSKSADTWRDDSLEFSLSDVSQ
DNLTSTEEIIDMANERDFADCEGHMQFSPTDSADRANSLDELYSDTSPASRIHGRYAKWH
DTNRSVGEGDDGKRLSPSEEDGTSYSAYTLPCRRSHCLSEGLSNLQATMCKSMQGRRAQT
IQDVTAGDGSEYEDSGIDGVMVEAVHQPRRYKTMSASFSVCSMHGRNVFVGSDSGSSSGG
GGASEGVQGVYENFRQELQMSSCQTESLEEAGSALSDEQSTMSSAYQSDLLLSVVQGMVR
KAGKLAVKNFLVHKKNKKVESATRRKWKTYWVSLKGCTLFFYETDGRSGIDNNSIPKHAI
WVENSIVQAVPEHPKKDFVFCLSNSLGDAYLFQTCSQTELENWITAIHSACATAVARQHH
REDTVRLLRAEIKKLEQKIDMDEKMKKMGEMQLSAVTDTKKRKTILDQIFLWEQNLEQFH
MDLFRFRCYLASLQGGELPNPKRLLAFASRPTKLTMGRLGIFSVSSFHALVAARTETGVR
RRTQAMSHSYKRKSRFSSLWGVDTTSKKKTKAHPTVSQVFADGEEPEKKTVDRIFVDSGK
ENTKTEDGTVKNLARPNTDSDMWVPENLTPSWVCLPNDQPVLTTIQPGESALCVLESICK
THELDPTKHYLRLKFFMENQTQFYIPKPEEDIYDLLYKEIELCSKITKVIQFDRDESCMI
GYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILQLNGKDSHSLNFSDMKAAFS
QVSLALTVNTLPSVDRRQLCYLPPRRSDAAEDLYTDIFSQSQEEILDDSVGLLLESSGDS
LDDDSEIFSEFDECGKSTEQVAAFCRSLHDMNPSECVSSSPSPDSPFPPTATPRQLSDAD
KLRKVICELVETERTYVKDLNCLIGRYLTPLQKENFLTQDELDVLFGNLPEMVEFQVEFL
KTLEDGTRLVPDLEKLESVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLVKA
KTDPNFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDV
AIKAMNKVASHINEMQKIHEEFGAVFDQLITEQSSEKKDVADLSMGDLLLHNTVTWINPP
ISLGKWKKEPQMATFVFKTAVVFVCKEESKQKKKIGGSHRVSVSSEEKDPFRFRHMIPTD
ALQIRSMSNTDGESSAMCEIVHTKSESEGRPERTFHLCCSSPEGRKEFLKTVHSILREKH
RRQLLKTESLPLNQQYVPFGGKRLCALKGARPAINRAASAPTRTLGRRKLVRNRFTIDTD
IVFDGDSEQQDLTSPQESDSVPLQQKEEQQSELAGDTDRWVEEQFDLEEYEDQEEMKETD
ILSDDDDGFCQTPRPPSEEVDLESPLMALSLEGAETDGSKSLPSPTVSDTPDEEKISDTE
RKSSVTDNSEDKNQAEKAEVWLRREPSDSSPECPT
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggggaacactgagagccaaaacggggaacatgccctctacagtactggacgtggctat
ttgtcacggaagcacatgtctcggtctctacgcatttccaacaaacagtcaaggcgttct
cggcatgcttcgtcggggaaaatggagcacagaaactctgagacaagcactcggtcaagt
agtacccccagcatcccacagtccctagctgacaatggtttggagcccttcaatgaaaca
aacaactttcctgacttcggaagccccatttgggtggatcgtgtggcaatgagtttgcgc
cctatatcctttcataatgatctggccaatccctcactgcatatgaatacaatgcacata
accctacctggtcccactgcggaagagacgcaggatgaggaagtgtacacaaatgaggtt
aaatatattcagcagaccttagagtgctccaaagagacaatcagcttcaaaaagagatcg
aaatctgcagacacctggcgagatgacagcctagaattttccctgtctgatgtcagtcaa
gataatttaaccagcactgaggagatcatcgacatggctaacgagagagactttgctgac
tgtgaaggccacatgcagttcagcccaacagactccgccgacagagcaaactcgctggat
gaactgtacagtgacaccagcccagcctccagaatccacggccgctatgccaagtggcat
gataccaacagatctgtgggagagggagatgacggtaagaggctgtcaccatcagaggag
gatgggacttcatacagcgcgtacactcttccctgccgacgttcccactgcctgtctgaa
ggcctgagcaacctccaagccacaatgtgcaagagtatgcagggccggagggcacagacc
atacaggatgtcacggccggagacggcagtgaatatgaagacagcgggatcgacggggtg
atggttgaggcagtgcaccaacctcgacgctacaagacgatgtcggcgtccttctctgtc
tgttccatgcacgggcgaaatgtgtttgttggcagtgacagcggcagcagcagtggcggc
ggtggcgccagcgagggtgtgcagggtgtgtacgagaacttccgtcaagaactacaaatg
agttcctgccagacggagagcttggaggaagcgggctccgcccttagcgatgagcagagc
accatgagctccgcctaccagtctgatctgttgctaagcgtcgtccagggaatggtccgg
aaagctggaaaacttgctgtaaagaacttccttgtgcacaaaaagaacaagaaagttgag
tctgccacaagacgcaagtggaagacttactgggtttccctaaaaggatgcactctcttc
ttttatgaaactgatggccggtcagggattgacaacaacagtattcccaagcatgccata
tgggtggagaacagtatcgtccaggctgtgcctgagcaccccaaaaaggactttgtgttc
tgcctcagcaattccttgggggatgcataccttttccagacttgcagccagacagagcta
gaaaactggatcacagccatccactcagcatgcgccacagccgtcgctcgccagcatcac
agagaggacaccgttaggctgctgcgtgctgagatcaagaagctggagcagaagatcgac
atggatgaaaagatgaaaaagatgggagagatgcaactgtctgctgtcactgacaccaag
aagaggaaaacaatcctggatcaaatcttcttgtgggagcagaacctggagcagttccac
atggatctgtttcgctttcggtgctacctggccagcttgcaaggtggagagttgcccaac
cctaaacgcctcctggcctttgcctcccgccccaccaagctgaccatgggcagactggga
atattctcagtctcttcctttcatgcactggtggcagctcgcacagagactggagtaaga
cgcagaacgcaagccatgtctcattcatacaagcgcaaaagcaggttttcctccctctgg
ggtgtagacacaacctcaaagaagaaaacaaaagcccaccctacggttagccaggtgttt
gctgatggtgaagagccagagaaaaaaacagtagatcgcatatttgttgattctgggaaa
gaaaacacaaaaacagaggacggaactgtgaaaaaccttgcgcgaccaaacactgatagc
gacatgtgggttcctgaaaacctcactccctcctgggtttgtctgccaaatgaccagcct
gtgttaaccaccatccagccaggagagtctgcactgtgtgttctggagtctatatgcaag
acccatgagcttgacccaaccaaacactacttgcgacttaagttctttatggaaaaccaa
acgcaattctacattcccaagccagaagaggacatctatgacttgctgtacaaagaaatt
gaactctgctccaaaataactaaagtaatccagtttgacagagatgaatcctgtatgatt
ggttatggtttttctatctcagtggtggaagaagatggagtacagcagctttacatcact
gatgtgaaggctgggggattagcctttgccaaaggtctgaatgccggagatgaaattctc
cagctgaatgggaaagactcccacagtctcaatttctcagacatgaaggctgcattctcc
caagtgtctctggctttgacggtcaacactttgccctcagtggaccgccgtcagctttgc
taccttccaccacggcgctctgatgcggcagaagacctctacactgacatcttctcccaa
agtcaagaggagattctggacgatagtgtgggactgctgcttgagagctctggagacagc
ctggatgatgattcggagatctttagcgaatttgatgagtgcggaaagagtacagagcag
gttgccgctttctgccgcagtctccatgacatgaatccctcagagtgtgtgtcctcttcg
ccgagcccggactcacccttcccgcctaccgcaactccccgacagctgtctgatgccgac
aagctccgcaaagtgatctgtgaactcgtggagaccgagcgcacctatgtcaaagatctc
aattgtctcattgggagatatttaaccccactgcagaaggagaatttcctcacacaggat
gagctggatgttctatttggcaatttgccagaaatggtggaattccaggttgagttccta
aaaacgctggaagatggaaccagattggttccagatctggagaagctggagagtgtggat
cagtttaagaaaatactcttttctttgggaggctctttcttgtactatgcggaccgtttt
aagatctacagtgctttttgtgccagtcacaccaaggtcccaaaggttcttgtgaaggcc
aaaactgaccctaatttcaaggcctttcttgatgagcggaaccccaagcagcagcactcc
tccaccctagaatcctatctgattaaacccatacagagggtgctaaaatacccccttctg
ctaagggagctctactcactgacagacccagacagtgaggaacactaccacttggatgtt
gctataaaggccatgaacaaggttgccagccacatcaatgaaatgcagaagatccacgag
gagtttggagcggtgtttgaccagctgatcactgagcaaagcagtgaaaagaaagacgtg
gctgatttatcgatgggagatttgctgctgcacaacacagtgacatggatcaacccacct
atttctctgggaaaatggaagaaagaaccacagatggcaacatttgttttcaaaactgct
gtggtgtttgtatgcaaagaagagtccaagcagaagaagaaaattggcggctcacatcgg
gtttctgtatcttcggaagaaaaagatcctttccgtttccgtcatatgattcctacagat
gcccttcaaatcagatccatgtcaaacacagacggtgagagttctgctatgtgtgaaata
gttcacacaaaatcagaatcagaaggaagaccagagaggacgtttcacctgtgctgcagc
tctccggagggcagaaaggaatttctgaagacagtccactccatcttgagggaaaagcac
cgccgacagctcctaaaaacagagagtttacccctcaaccagcagtatgtgccatttgga
ggaaaacgactctgtgctctgaaaggagcccgtccagccataaatagagctgcatctgcc
ccaaccagaactctaggcaggagaaagctggtgcgcaatcgtttcaccatagacaccgac
attgtttttgatggggactcggaacagcaggacctcacttcgccacaggaatccgattca
gttccgctgcagcagaaggaggagcagcagtctgagttagcgggagatacagaccgctgg
gtggaggaacagtttgacctagaagagtatgaagaccaggaagaaatgaaggagacagac
atcctaagcgatgatgacgacgggttttgccaaacacccagacctccatctgaagaggtt
gatctggagagccccctgatggctttatccctggagggagcagaaacagatgggagtaag
agcctgccgtctccaactgtgagcgacacaccagatgaagagaagatatccgacacagag
aggaagagctctgtaaccgacaactctgaggataagaatcaagcagagaaggctgaggtt
tggcttcgacgggagccatcagattcatctccagaatgccccacataa
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integrated database retrieval system
