Xanthomonas campestris pv. raphani: XCR_1779
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Entry
XCR_1779 CDS
T01872
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00270
Cysteine and methionine metabolism
xcp00450
Selenocompound metabolism
xcp00670
One carbon pool by folate
xcp01100
Metabolic pathways
xcp01110
Biosynthesis of secondary metabolites
xcp01230
Biosynthesis of amino acids
xcp04980
Cobalamin transport and metabolism
xcp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
XCR_1779 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
XCR_1779 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XCR_1779 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
XCR_1779 (metH)
04980 Cobalamin transport and metabolism
XCR_1779 (metH)
Enzymes [BR:
xcp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
XCR_1779 (metH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
ComA
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
AEL06676
LinkDB
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Position
complement(1814037..1816793)
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AA seq
918 aa
AA seq
DB search
MNAQPRYTRLSGLEPLVITPDLLFVNVGERTNVTGSAQFRKLIKEERYEEAVEVARQQVA
NGAQILDVNMDEGLIDSEKAMTRFLNLIMSEPDIARIPVMVDSSKWTVIEAGLKCLQGKS
IVNSISLKEGEAVFIEQARKVLRYGAAAVVMAFDEVGQADTCARKVEICTRAYKVLTEKV
GFPPEDIIFDPNIFAVATGIEEHDNYAVDFIEATREIKRTLPHCHISGGVSNVSFSFRGN
ESVRQAIHSVFLFHAIKAGMDMGIVNAGGMPIYDELDPELRERVEDVILNRRKDGTERLL
EIAERYKGTKGAARTEDLACREKPVRARLAHALVHGIDAFVETDTEEARQLSTRPLDVIE
GPLMDGMNVVGDLFGAGKMFLPQVVKSARVMKKAVAYLLPFIEAEKLRTGDVGKSNGKII
MATVKGDVHDIGKNIVGVVLACNNFDVVDLGVMVSAQVILDRAREENADLIGLSGLITPS
LEEMSHVAREMQRQGFEIPLLIGGATTSRAHTALKIDPHYTAPTVWVKDASRAVGVAQSL
ISRDLRQAFVAANDADYAEIRARHRNRGDAKRLVSLEKARAQKFDGGWDSYTPPAPRQPG
LQVFDDYPLDELIELIDWTPFFQAWELAGKFPAILSDEIVGPQASELYRDARRMLKRIVE
EKWLTAKAVFGLWPANSVGDDVEVVMTDHRDSAVGIGESQQPSQSRITNPESRHLLHFLR
QQVDKPVDRPDFCLADFIAPRSSGKQDWIGAFAVTAGIGIDPHVARFEAAHDDYNSILLK
ALADRLAEALAERLHQRVRTEFWGYIADETLDNEALIAERYQGIRPAPGYPACPEHSEKR
TLFHLLHAEHNAAMSLTESFAMLPTAAVSGYYFSHPKSQYFVVGRLGKEQVADYAKRKGI
TLALAERWLASNLDYDPE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacagccccgctacacccgtctgtccggcctggaaccgctggtcatcaccccg
gacctgctgttcgtcaacgtgggcgagcgcaccaacgtcaccggcagcgcgcagttccgc
aagctgatcaaggaagagcgctacgaggaagcggtggaggtggcgcgccaacaggttgcc
aacggcgctcagattctcgacgtcaacatggacgagggcctgatcgattccgagaaggca
atgacgcgctttctcaacctgatcatgtccgagccggatatcgcgcgcatcccggtgatg
gtggattcgtccaaatggaccgtgatcgaagcgggcctgaagtgcctgcagggcaagagc
atcgtcaactcgatctcgctcaaggaaggcgaagcggtattcatcgaacaggcgcgcaag
gtgctgcgctacggcgccgccgcggtggtgatggcgttcgatgaagtgggccaggccgac
acctgcgcgcgcaaggtggagatctgcacacgcgcctacaaggtgctgactgaaaaagtg
ggcttcccgccggaagacatcatcttcgacccgaacatctttgccgtggccaccggcatc
gaggagcacgacaactacgcggtggacttcatcgaggccacgcgcgagatcaaacgcacc
ctgccgcactgccatatctccggcggcgtctccaatgtgtcgttctcgttccgcggcaat
gaaagcgtgcgtcaggcgatccactcggtattcctgttccatgcaatcaaggccggtatg
gacatgggtatcgtcaacgctggcggcatgccgatttacgatgagctcgacccggagctg
cgcgagcgcgtggaggatgtgatcctcaaccgccgcaaggatggcaccgagcggctgctg
gaaatcgccgagcgctacaagggcaccaagggcgcagccaggaccgaagatctggcctgc
cgcgaaaaacccgtgcgtgcacgcctggcgcatgcactggtgcacggcatcgatgcattt
gtggaaaccgacaccgaagaagcccggcaactctccacgcgcccgctggacgtgatcgaa
gggccgttaatggatggcatgaacgtggtcggcgatctgttcggcgccggcaagatgttc
cttccgcaggtggtcaaatccgcacgtgtcatgaagaaagccgtggcctatctgctgccc
ttcatcgaggcggaaaaactgcgtaccggcgatgtcggcaagtccaacggcaagatcatc
atggccacggtcaagggtgacgtgcacgacatcggcaagaacatcgtcggcgtggtactg
gcgtgcaacaacttcgatgtggtcgacctgggcgtgatggtcagcgcgcaggtcatcctg
gatcgtgcgcgcgaagaaaacgcagacctgatcgggctatcgggcctgatcacgccctcg
ctggaagagatgtcgcacgtagcgcgcgagatgcagcggcagggcttcgagattccgctg
ttgatcggtggcgctaccacttcgcgtgcgcacacggcgctgaagatcgacccgcattac
accgcgcccaccgtgtgggtgaaggatgcctcgcgcgcggtgggtgtggcgcaatcgttg
atctcgcgcgatctgcgccaggccttcgtcgccgccaacgatgccgattacgccgagatt
cgcgcgcgccatcgcaaccgtggcgatgccaagcggctggtgtcgctggaaaaggcacgc
gcgcaaaagttcgatggcggctgggacagctacacgccccctgctccgcgccagcccggc
ctgcaggtgttcgacgactacccgctggacgagctgatcgagctaatcgactggaccccg
ttcttccaggcctgggaactggccggcaagttcccggccatcctcagcgacgagatcgtc
ggcccccaggccagcgagctgtatcgcgatgcccggcgcatgctcaaacgcatcgtcgaa
gagaaatggctgaccgccaaagccgtcttcggcctgtggccggcgaacagtgtgggcgat
gatgttgaagtggtcatgacggaccacagggattcggcagtcgggattggggagtcgcaa
cagcccagccaatcccgaattaccaatcccgaatctcggcacttattgcactttttgcgc
cagcaagtcgacaaacccgtcgaccgcccggacttctgtctggccgacttcatcgcaccc
aggagcagcggcaagcaggactggattggcgcgttcgcggtcaccgccgggatcggcatc
gacccgcatgtggcacgtttcgaagcggcccacgacgactacaactccattctgctcaag
gcgttggccgatcgcctggccgaggccttggccgaacgcctgcatcagcgcgtccgcacc
gaattctggggctatatcgccgatgagactctggacaacgaggcgttgattgcagagcgc
tatcaaggtatccgcccggcgcccggttatccggcctgcccggagcacagcgaaaaacgc
accttgttccatctgttgcatgccgagcacaacgcggcgatgtcgctgacggaaagcttc
gccatgctgcccaccgcggccgtgtcgggctactacttcagccaccccaagagccagtat
ttcgtggtggggcgcctgggcaaggaacaggttgccgactacgccaagcgcaagggcatc
acgctggcgctggccgaacgctggttggcatcgaatctggactacgacccggagtga
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